RNA–Protein interactions for RNA: ENST00000299954.13

PITPNC1-201, Transcript of phosphatidylinositol transfer protein cytoplasmic 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PITPNC1, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNC1-201ENST00000299954 DCAF8L2P0C7V8 631 aa31.55■■■□□ 2.64
PITPNC1-201ENST00000299954 SUPT5HO00267 1087 aaKnown RBP30.03■■■□□ 2.4
PITPNC1-201ENST00000299954 EHMT2Q96KQ7 1210 aa29.87■■■□□ 2.37
PITPNC1-201ENST00000299954 PELP1Q8IZL8 1130 aaKnown RBP29.42■■■□□ 2.3
PITPNC1-201ENST00000299954 SHROOM4Q9ULL8 1493 aa29.28■■■□□ 2.28
PITPNC1-201ENST00000299954 TTBK1Q5TCY1 1321 aaPredicted RBP28.87■■■□□ 2.21
PITPNC1-201ENST00000299954 APLP2Q06481 763 aa28.73■■■□□ 2.19
PITPNC1-201ENST00000299954 ERICH6Q7L0X2 663 aa28.61■■■□□ 2.17
PITPNC1-201ENST00000299954 FAM9AQ8IZU1 332 aaPredicted RBP28.58■■■□□ 2.17
PITPNC1-201ENST00000299954 PCGF6Q9BYE7 350 aa28.47■■■□□ 2.15
PITPNC1-201ENST00000299954 RANGAP1P46060 587 aaPredicted RBP28.3■■■□□ 2.12
PITPNC1-201ENST00000299954 CENPBP07199 599 aaPredicted RBP28.17■■■□□ 2.1
PITPNC1-201ENST00000299954 CCER1Q8TC90 406 aaPredicted RBP28.12■■■□□ 2.09
PITPNC1-201ENST00000299954 YTHDC1Q96MU7 727 aaKnown RBP28.01■■■□□ 2.07
PITPNC1-201ENST00000299954 ATP1B4Q9UN42 357 aaPredicted RBP27.95■■■□□ 2.07
PITPNC1-201ENST00000299954 NISCHQ9Y2I1 1504 aa27.88■■■□□ 2.05
PITPNC1-201ENST00000299954 NEFLP07196 543 aa27.72■■■□□ 2.03
PITPNC1-201ENST00000299954 MYT1Q01538 1121 aa27.69■■■□□ 2.02
PITPNC1-201ENST00000299954 ZEB1P37275 1124 aaPredicted RBP27.67■■■□□ 2.02
PITPNC1-201ENST00000299954 PPARGC1BQ86YN6 1023 aaKnown RBP27.52■■■□□ 2
PITPNC1-201ENST00000299954 TRIM41Q8WV44 630 aa27.52■■■□□ 2
PITPNC1-201ENST00000299954 UBTFP17480 764 aaKnown RBP27.44■■□□□ 1.98
PITPNC1-201ENST00000299954 POLR3GLQ9BT43 218 aa27.18■■□□□ 1.94
PITPNC1-201ENST00000299954 DAXXQ9UER7 740 aaPredicted RBP27.17■■□□□ 1.94
PITPNC1-201ENST00000299954 CNGB1Q14028 1251 aaPredicted RBP27.13■■□□□ 1.93
PITPNC1-201ENST00000299954 ITGAEP38570 1179 aa27.01■■□□□ 1.91
PITPNC1-201ENST00000299954 MYT1LQ9UL68 1186 aa26.86■■□□□ 1.89
PITPNC1-201ENST00000299954 HRCP23327 699 aa26.8■■□□□ 1.88
PITPNC1-201ENST00000299954 TRIM26Q12899 539 aaPredicted RBP26.76■■□□□ 1.87
PITPNC1-201ENST00000299954 CHIC1Q5VXU3 224 aa26.74■■□□□ 1.87
PITPNC1-201ENST00000299954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.71■■□□□ 1.87
PITPNC1-201ENST00000299954 HNRNPUL2Q1KMD3 747 aaKnown RBP26.71■■□□□ 1.87
PITPNC1-201ENST00000299954 SLC4A1APQ9BWU0 796 aaKnown RBP26.62■■□□□ 1.85
PITPNC1-201ENST00000299954 ZNF316A6NFI3 1004 aaPredicted RBP26.55■■□□□ 1.84
PITPNC1-201ENST00000299954 RTL5Q5HYW3 569 aaPredicted RBP26.52■■□□□ 1.84
PITPNC1-201ENST00000299954 CLSPNQ9HAW4 1339 aa26.52■■□□□ 1.84
PITPNC1-201ENST00000299954 LOC105371045A0A1W2PR82 267 aa26.5■■□□□ 1.83
PITPNC1-201ENST00000299954 BCANQ96GW7 911 aa26.35■■□□□ 1.81
PITPNC1-201ENST00000299954 DIEXFQ68CQ4 756 aaKnown RBP26.25■■□□□ 1.79
PITPNC1-201ENST00000299954 BCL11AQ9H165 835 aa26.1■■□□□ 1.77
PITPNC1-201ENST00000299954 NEUROD1Q13562 356 aa26.05■■□□□ 1.76
PITPNC1-201ENST00000299954 FAM50AQ14320 339 aaKnown RBP26.03■■□□□ 1.76
PITPNC1-201ENST00000299954 GTF3C3Q9Y5Q9 886 aa26■■□□□ 1.75
PITPNC1-201ENST00000299954 TRIM52Q96A61 297 aa25.98■■□□□ 1.75
PITPNC1-201ENST00000299954 ZNF326Q5BKZ1 582 aaKnown RBP25.9■■□□□ 1.74
PITPNC1-201ENST00000299954 CDK11AQ9UQ88 783 aaPredicted RBP25.84■■□□□ 1.73
PITPNC1-201ENST00000299954 SLC24A1O60721 1099 aa25.83■■□□□ 1.72
PITPNC1-201ENST00000299954 ZBTB47Q9UFB7 747 aaPredicted RBP25.78■■□□□ 1.72
PITPNC1-201ENST00000299954 ANP32CO43423 234 aa25.72■■□□□ 1.71
PITPNC1-201ENST00000299954 CANXP27824 592 aaKnown RBP25.7■■□□□ 1.7
PITPNC1-201ENST00000299954 NPM2Q86SE8 214 aaKnown RBP25.64■■□□□ 1.7
PITPNC1-201ENST00000299954 EIF5BO60841 1220 aaKnown RBP25.53■■□□□ 1.68
PITPNC1-201ENST00000299954 ANP32AP39687 249 aaKnown RBP25.45■■□□□ 1.66
PITPNC1-201ENST00000299954 ARID3CA6NKF2 412 aa25.37■■□□□ 1.65
PITPNC1-201ENST00000299954 ACIN1Q9UKV3 1341 aaKnown RBP25.32■■□□□ 1.64
PITPNC1-201ENST00000299954 NEFMP07197 916 aa25.29■■□□□ 1.64
PITPNC1-201ENST00000299954 FBLN2P98095 1184 aa25.28■■□□□ 1.64
PITPNC1-201ENST00000299954 FKBP8Q14318 412 aa25.23■■□□□ 1.63
PITPNC1-201ENST00000299954 P3H3Q8IVL6 736 aa25.21■■□□□ 1.63
PITPNC1-201ENST00000299954 ARXQ96QS3 562 aa25.2■■□□□ 1.62
PITPNC1-201ENST00000299954 HSP90AA1P07900 732 aaKnown RBP25.19■■□□□ 1.62
PITPNC1-201ENST00000299954 ANP32BQ92688 251 aaKnown RBP25.16■■□□□ 1.62
PITPNC1-201ENST00000299954 NBR1Q14596 966 aa25.14■■□□□ 1.61
PITPNC1-201ENST00000299954 PABPN1Q86U42 306 aaKnown RBP eCLIP25.13■■□□□ 1.61
PITPNC1-201ENST00000299954 SALL2Q9Y467 1007 aaPredicted RBP25.13■■□□□ 1.61
PITPNC1-201ENST00000299954 ZNF777Q9ULD5 760 aaPredicted RBP25.1■■□□□ 1.61
PITPNC1-201ENST00000299954 FAM9BQ8IZU0 186 aa25.03■■□□□ 1.6
PITPNC1-201ENST00000299954 PLPPR3Q6T4P5 718 aa25■■□□□ 1.59
PITPNC1-201ENST00000299954 HNRNPUQ00839 825 aaKnown RBP eCLIP24.99■■□□□ 1.59
PITPNC1-201ENST00000299954 UPF2Q9HAU5 1272 aaKnown RBP24.93■■□□□ 1.58
PITPNC1-201ENST00000299954 CHGAP10645 457 aaKnown RBP24.92■■□□□ 1.58
PITPNC1-201ENST00000299954 DDX10Q13206 875 aaKnown RBP24.89■■□□□ 1.57
PITPNC1-201ENST00000299954 GLIPR1L2Q4G1C9 344 aa24.85■■□□□ 1.57
PITPNC1-201ENST00000299954 IRX6P78412 446 aaPredicted RBP24.84■■□□□ 1.57
PITPNC1-201ENST00000299954 CCDC136Q96JN2 1154 aa24.8■■□□□ 1.56
PITPNC1-201ENST00000299954 STAG3Q9UJ98 1225 aa24.75■■□□□ 1.55
PITPNC1-201ENST00000299954 TONSLQ96HA7 1378 aa24.74■■□□□ 1.55
PITPNC1-201ENST00000299954 ESF1Q9H501 851 aaKnown RBP24.67■■□□□ 1.54
PITPNC1-201ENST00000299954 TMC1Q8TDI8 760 aa24.65■■□□□ 1.54
PITPNC1-201ENST00000299954 SENP3Q9H4L4 574 aaPredicted RBP24.63■■□□□ 1.53
PITPNC1-201ENST00000299954 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.63■■□□□ 1.53
PITPNC1-201ENST00000299954 ABCC9O60706 1549 aa24.62■■□□□ 1.53
PITPNC1-201ENST00000299954 HIRIP3Q9BW71 556 aaPredicted RBP24.61■■□□□ 1.53
PITPNC1-201ENST00000299954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.61■■□□□ 1.53
PITPNC1-201ENST00000299954 CHIC2Q9UKJ5 165 aa24.6■■□□□ 1.53
PITPNC1-201ENST00000299954 PLEKHG5O94827 1062 aa24.59■■□□□ 1.53
PITPNC1-201ENST00000299954 SENP3-EIF4A1A0A087X0R7 540 aa24.58■■□□□ 1.53
PITPNC1-201ENST00000299954 CSRNP3Q8WYN3 585 aa24.58■■□□□ 1.53
PITPNC1-201ENST00000299954 WDR43Q15061 677 aaKnown RBP eCLIP24.58■■□□□ 1.52
PITPNC1-201ENST00000299954 SCAF1Q9H7N4 1312 aaKnown RBP24.56■■□□□ 1.52
PITPNC1-201ENST00000299954 KDM2AQ9Y2K7 1162 aa24.56■■□□□ 1.52
PITPNC1-201ENST00000299954 A0A0G2JS52 829 aa24.55■■□□□ 1.52
PITPNC1-201ENST00000299954 MRS2Q9HD23 443 aa24.54■■□□□ 1.52
PITPNC1-201ENST00000299954 TPRNQ4KMQ1 711 aa24.52■■□□□ 1.52
PITPNC1-201ENST00000299954 ZBTB7CA1YPR0 619 aa24.48■■□□□ 1.51
PITPNC1-201ENST00000299954 CDK11BP21127 795 aaKnown RBP24.46■■□□□ 1.51
PITPNC1-201ENST00000299954 MIER1Q8N108 512 aa24.45■■□□□ 1.5
PITPNC1-201ENST00000299954 NCLP19338 710 aaKnown RBP24.41■■□□□ 1.5
PITPNC1-201ENST00000299954 MYH16Q9H6N6 1097 aa24.41■■□□□ 1.5
PITPNC1-201ENST00000299954 TRIM44Q96DX7 344 aaPredicted RBP24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms