RNA–Protein interactions for RNA: ENST00000375835.8

SHC3-202, Transcript of SHC adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHC3, Length 9,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3-202ENST00000375835 PELP1Q8IZL8 1130 aaKnown RBP29.8■■■□□ 2.36
SHC3-202ENST00000375835 MYT1Q01538 1121 aa28.95■■■□□ 2.22
SHC3-202ENST00000375835 DCAF8L2P0C7V8 631 aa28.44■■■□□ 2.14
SHC3-202ENST00000375835 CCER1Q8TC90 406 aaPredicted RBP28.25■■■□□ 2.11
SHC3-202ENST00000375835 ERICH6Q7L0X2 663 aa28.02■■■□□ 2.08
SHC3-202ENST00000375835 CENPBP07199 599 aaPredicted RBP27.95■■■□□ 2.06
SHC3-202ENST00000375835 SUPT5HO00267 1087 aaKnown RBP27.71■■■□□ 2.03
SHC3-202ENST00000375835 ZEB1P37275 1124 aaPredicted RBP27.7■■■□□ 2.02
SHC3-202ENST00000375835 APLP2Q06481 763 aa27.59■■■□□ 2.01
SHC3-202ENST00000375835 NISCHQ9Y2I1 1504 aa27.53■■■□□ 2
SHC3-202ENST00000375835 YTHDC1Q96MU7 727 aaKnown RBP27.36■■□□□ 1.97
SHC3-202ENST00000375835 NEFLP07196 543 aa27.24■■□□□ 1.95
SHC3-202ENST00000375835 FAM9AQ8IZU1 332 aaPredicted RBP27.14■■□□□ 1.94
SHC3-202ENST00000375835 PCGF6Q9BYE7 350 aa26.96■■□□□ 1.91
SHC3-202ENST00000375835 TTBK1Q5TCY1 1321 aaPredicted RBP26.92■■□□□ 1.9
SHC3-202ENST00000375835 SHROOM4Q9ULL8 1493 aa26.89■■□□□ 1.9
SHC3-202ENST00000375835 DAXXQ9UER7 740 aaPredicted RBP26.72■■□□□ 1.87
SHC3-202ENST00000375835 EHMT2Q96KQ7 1210 aa26.6■■□□□ 1.85
SHC3-202ENST00000375835 RTL5Q5HYW3 569 aaPredicted RBP26.27■■□□□ 1.8
SHC3-202ENST00000375835 TRIM26Q12899 539 aaPredicted RBP26.04■■□□□ 1.76
SHC3-202ENST00000375835 ZNF316A6NFI3 1004 aaPredicted RBP26.04■■□□□ 1.76
SHC3-202ENST00000375835 TRIM41Q8WV44 630 aa26.03■■□□□ 1.76
SHC3-202ENST00000375835 HRCP23327 699 aa25.94■■□□□ 1.74
SHC3-202ENST00000375835 UBTFP17480 764 aaKnown RBP25.79■■□□□ 1.72
SHC3-202ENST00000375835 ATP1B4Q9UN42 357 aaPredicted RBP25.6■■□□□ 1.69
SHC3-202ENST00000375835 GLIPR1L2Q4G1C9 344 aa25.55■■□□□ 1.68
SHC3-202ENST00000375835 RANGAP1P46060 587 aaPredicted RBP25.48■■□□□ 1.67
SHC3-202ENST00000375835 CLSPNQ9HAW4 1339 aa25.48■■□□□ 1.67
SHC3-202ENST00000375835 MYT1LQ9UL68 1186 aa25.48■■□□□ 1.67
SHC3-202ENST00000375835 DIEXFQ68CQ4 756 aaKnown RBP25.41■■□□□ 1.66
SHC3-202ENST00000375835 CDK11AQ9UQ88 783 aaPredicted RBP25.33■■□□□ 1.65
SHC3-202ENST00000375835 ANP32AP39687 249 aaKnown RBP25.15■■□□□ 1.62
SHC3-202ENST00000375835 ANP32BQ92688 251 aaKnown RBP25.13■■□□□ 1.61
SHC3-202ENST00000375835 POLR3GLQ9BT43 218 aa25.08■■□□□ 1.6
SHC3-202ENST00000375835 ZBTB47Q9UFB7 747 aaPredicted RBP25.04■■□□□ 1.6
SHC3-202ENST00000375835 GTF3C3Q9Y5Q9 886 aa25.02■■□□□ 1.6
SHC3-202ENST00000375835 ANP32CO43423 234 aa24.92■■□□□ 1.58
SHC3-202ENST00000375835 PPARGC1BQ86YN6 1023 aaKnown RBP24.84■■□□□ 1.57
SHC3-202ENST00000375835 EIF5BO60841 1220 aaKnown RBP24.79■■□□□ 1.56
SHC3-202ENST00000375835 ITGAEP38570 1179 aa24.79■■□□□ 1.56
SHC3-202ENST00000375835 HNRNPUL2Q1KMD3 747 aaKnown RBP24.76■■□□□ 1.55
SHC3-202ENST00000375835 ACIN1Q9UKV3 1341 aaKnown RBP24.73■■□□□ 1.55
SHC3-202ENST00000375835 SLC4A1APQ9BWU0 796 aaKnown RBP24.7■■□□□ 1.54
SHC3-202ENST00000375835 CANXP27824 592 aaKnown RBP24.69■■□□□ 1.54
SHC3-202ENST00000375835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.65■■□□□ 1.54
SHC3-202ENST00000375835 UPF2Q9HAU5 1272 aaKnown RBP24.64■■□□□ 1.54
SHC3-202ENST00000375835 BCANQ96GW7 911 aa24.61■■□□□ 1.53
SHC3-202ENST00000375835 NEFMP07197 916 aa24.61■■□□□ 1.53
SHC3-202ENST00000375835 HSP90AA1P07900 732 aaKnown RBP24.53■■□□□ 1.52
SHC3-202ENST00000375835 CHIC1Q5VXU3 224 aa24.51■■□□□ 1.51
SHC3-202ENST00000375835 TNNT2P45379 298 aaPredicted RBP24.48■■□□□ 1.51
SHC3-202ENST00000375835 CNGB1Q14028 1251 aaPredicted RBP24.45■■□□□ 1.51
SHC3-202ENST00000375835 ANP32EQ9BTT0 268 aa24.41■■□□□ 1.5
SHC3-202ENST00000375835 FAM50AQ14320 339 aaKnown RBP24.37■■□□□ 1.49
SHC3-202ENST00000375835 LOC105371045A0A1W2PR82 267 aa24.37■■□□□ 1.49
SHC3-202ENST00000375835 DCAF1Q9Y4B6 1507 aa24.29■■□□□ 1.48
SHC3-202ENST00000375835 TRIM52Q96A61 297 aa24.27■■□□□ 1.48
SHC3-202ENST00000375835 NPM2Q86SE8 214 aaKnown RBP24.26■■□□□ 1.47
SHC3-202ENST00000375835 CCDC180Q9P1Z9 1646 aa24.25■■□□□ 1.47
SHC3-202ENST00000375835 NEUROD1Q13562 356 aa24.23■■□□□ 1.47
SHC3-202ENST00000375835 DDRGK1Q96HY6 314 aa24.18■■□□□ 1.46
SHC3-202ENST00000375835 TRIM44Q96DX7 344 aaPredicted RBP24.16■■□□□ 1.46
SHC3-202ENST00000375835 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.11■■□□□ 1.45
SHC3-202ENST00000375835 BECN1Q14457 450 aa24.1■■□□□ 1.45
SHC3-202ENST00000375835 FKBP8Q14318 412 aa24.1■■□□□ 1.45
SHC3-202ENST00000375835 NBR1Q14596 966 aa24.06■■□□□ 1.44
SHC3-202ENST00000375835 ERICH6BQ5W0A0 696 aa24.03■■□□□ 1.44
SHC3-202ENST00000375835 CDK11BP21127 795 aaKnown RBP24.01■■□□□ 1.43
SHC3-202ENST00000375835 ZNF326Q5BKZ1 582 aaKnown RBP24.01■■□□□ 1.43
SHC3-202ENST00000375835 CCDC136Q96JN2 1154 aa24■■□□□ 1.43
SHC3-202ENST00000375835 GOLGA6L22H0YM25 854 aa23.99■■□□□ 1.43
SHC3-202ENST00000375835 NCLP19338 710 aaKnown RBP23.98■■□□□ 1.43
SHC3-202ENST00000375835 TONSLQ96HA7 1378 aa23.97■■□□□ 1.43
SHC3-202ENST00000375835 SLC24A1O60721 1099 aa23.89■■□□□ 1.41
SHC3-202ENST00000375835 HNRNPUQ00839 825 aaKnown RBP eCLIP23.87■■□□□ 1.41
SHC3-202ENST00000375835 MYH16Q9H6N6 1097 aa23.86■■□□□ 1.41
SHC3-202ENST00000375835 BCL11AQ9H165 835 aa23.77■■□□□ 1.4
SHC3-202ENST00000375835 PPM1GO15355 546 aaPredicted RBP23.77■■□□□ 1.4
SHC3-202ENST00000375835 GOLGA6L6A8MZA4 724 aa23.72■■□□□ 1.39
SHC3-202ENST00000375835 ZRSR1Q15695 479 aaKnown RBP23.67■■□□□ 1.38
SHC3-202ENST00000375835 PTMAP06454 111 aaKnown RBP23.67■■□□□ 1.38
SHC3-202ENST00000375835 CASC1Q6TDU7 716 aa23.65■■□□□ 1.38
SHC3-202ENST00000375835 ARXQ96QS3 562 aa23.65■■□□□ 1.38
SHC3-202ENST00000375835 SCAF1Q9H7N4 1312 aaKnown RBP23.65■■□□□ 1.38
SHC3-202ENST00000375835 CHAF1AQ13111 956 aaPredicted RBP23.65■■□□□ 1.38
SHC3-202ENST00000375835 TMC1Q8TDI8 760 aa23.64■■□□□ 1.37
SHC3-202ENST00000375835 NAP1L5Q96NT1 182 aaPredicted RBP23.64■■□□□ 1.37
SHC3-202ENST00000375835 DNTTIP2Q5QJE6 756 aaKnown RBP23.63■■□□□ 1.37
SHC3-202ENST00000375835 WDR43Q15061 677 aaKnown RBP eCLIP23.61■■□□□ 1.37
SHC3-202ENST00000375835 NRDCO43847 1150 aa23.59■■□□□ 1.37
SHC3-202ENST00000375835 FAM9BQ8IZU0 186 aa23.55■■□□□ 1.36
SHC3-202ENST00000375835 L1TD1Q5T7N2 865 aaKnown RBP23.52■■□□□ 1.36
SHC3-202ENST00000375835 NOP58Q9Y2X3 529 aaKnown RBP23.48■■□□□ 1.35
SHC3-202ENST00000375835 MRS2Q9HD23 443 aa23.46■■□□□ 1.35
SHC3-202ENST00000375835 PTMSP20962 102 aa23.45■■□□□ 1.34
SHC3-202ENST00000375835 DDX10Q13206 875 aaKnown RBP23.41■■□□□ 1.34
SHC3-202ENST00000375835 MSNP26038 577 aaKnown RBP23.39■■□□□ 1.33
SHC3-202ENST00000375835 CHMP4BQ9H444 224 aaKnown RBP23.38■■□□□ 1.33
SHC3-202ENST00000375835 CFAP44Q96MT7 982 aa23.3■■□□□ 1.32
SHC3-202ENST00000375835 CSRNP3Q8WYN3 585 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms