RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 DCAF8L2P0C7V8 631 aa29.93■■■□□ 2.38
CACNA1A-225ENST00000636389 PELP1Q8IZL8 1130 aaKnown RBP28.5■■■□□ 2.15
CACNA1A-225ENST00000636389 EHMT2Q96KQ7 1210 aa28.15■■■□□ 2.1
CACNA1A-225ENST00000636389 SUPT5HO00267 1087 aaKnown RBP27.82■■■□□ 2.04
CACNA1A-225ENST00000636389 ERICH6Q7L0X2 663 aa27.69■■■□□ 2.02
CACNA1A-225ENST00000636389 APLP2Q06481 763 aa27.48■■□□□ 1.99
CACNA1A-225ENST00000636389 FAM9AQ8IZU1 332 aaPredicted RBP27.37■■□□□ 1.97
CACNA1A-225ENST00000636389 CCER1Q8TC90 406 aaPredicted RBP27.25■■□□□ 1.95
CACNA1A-225ENST00000636389 TTBK1Q5TCY1 1321 aaPredicted RBP27.2■■□□□ 1.94
CACNA1A-225ENST00000636389 SHROOM4Q9ULL8 1493 aa27.05■■□□□ 1.92
CACNA1A-225ENST00000636389 MYT1Q01538 1121 aa26.88■■□□□ 1.89
CACNA1A-225ENST00000636389 RANGAP1P46060 587 aaPredicted RBP26.8■■□□□ 1.88
CACNA1A-225ENST00000636389 ATP1B4Q9UN42 357 aaPredicted RBP26.8■■□□□ 1.88
CACNA1A-225ENST00000636389 PCGF6Q9BYE7 350 aa26.63■■□□□ 1.85
CACNA1A-225ENST00000636389 CENPBP07199 599 aaPredicted RBP26.58■■□□□ 1.85
CACNA1A-225ENST00000636389 NEFLP07196 543 aa26.51■■□□□ 1.83
CACNA1A-225ENST00000636389 DAXXQ9UER7 740 aaPredicted RBP26.4■■□□□ 1.82
CACNA1A-225ENST00000636389 YTHDC1Q96MU7 727 aaKnown RBP26.3■■□□□ 1.8
CACNA1A-225ENST00000636389 MYT1LQ9UL68 1186 aa26.17■■□□□ 1.78
CACNA1A-225ENST00000636389 CHIC1Q5VXU3 224 aa26.03■■□□□ 1.76
CACNA1A-225ENST00000636389 POLR3GLQ9BT43 218 aa26.02■■□□□ 1.76
CACNA1A-225ENST00000636389 SLC4A1APQ9BWU0 796 aaKnown RBP25.88■■□□□ 1.73
CACNA1A-225ENST00000636389 CNGB1Q14028 1251 aaPredicted RBP25.85■■□□□ 1.73
CACNA1A-225ENST00000636389 UBTFP17480 764 aaKnown RBP25.82■■□□□ 1.72
CACNA1A-225ENST00000636389 ZEB1P37275 1124 aaPredicted RBP25.81■■□□□ 1.72
CACNA1A-225ENST00000636389 ZNF316A6NFI3 1004 aaPredicted RBP25.68■■□□□ 1.7
CACNA1A-225ENST00000636389 CLSPNQ9HAW4 1339 aa25.61■■□□□ 1.69
CACNA1A-225ENST00000636389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.6■■□□□ 1.69
CACNA1A-225ENST00000636389 HNRNPUL2Q1KMD3 747 aaKnown RBP25.6■■□□□ 1.69
CACNA1A-225ENST00000636389 TRIM41Q8WV44 630 aa25.56■■□□□ 1.68
CACNA1A-225ENST00000636389 NISCHQ9Y2I1 1504 aa25.52■■□□□ 1.68
CACNA1A-225ENST00000636389 PPARGC1BQ86YN6 1023 aaKnown RBP25.49■■□□□ 1.67
CACNA1A-225ENST00000636389 ITGAEP38570 1179 aa25.45■■□□□ 1.66
CACNA1A-225ENST00000636389 RTL5Q5HYW3 569 aaPredicted RBP25.39■■□□□ 1.65
CACNA1A-225ENST00000636389 SLC24A1O60721 1099 aa25.29■■□□□ 1.64
CACNA1A-225ENST00000636389 BCL11AQ9H165 835 aa25.24■■□□□ 1.63
CACNA1A-225ENST00000636389 ZBTB47Q9UFB7 747 aaPredicted RBP25.1■■□□□ 1.61
CACNA1A-225ENST00000636389 BCANQ96GW7 911 aa24.77■■□□□ 1.56
CACNA1A-225ENST00000636389 CANXP27824 592 aaKnown RBP24.71■■□□□ 1.55
CACNA1A-225ENST00000636389 TRIM26Q12899 539 aaPredicted RBP24.59■■□□□ 1.53
CACNA1A-225ENST00000636389 TRIM52Q96A61 297 aa24.57■■□□□ 1.52
CACNA1A-225ENST00000636389 ZNF326Q5BKZ1 582 aaKnown RBP24.53■■□□□ 1.52
CACNA1A-225ENST00000636389 NEFMP07197 916 aa24.53■■□□□ 1.52
CACNA1A-225ENST00000636389 FAM50AQ14320 339 aaKnown RBP24.53■■□□□ 1.52
CACNA1A-225ENST00000636389 HRCP23327 699 aa24.52■■□□□ 1.52
CACNA1A-225ENST00000636389 NEUROD1Q13562 356 aa24.45■■□□□ 1.5
CACNA1A-225ENST00000636389 CDK11AQ9UQ88 783 aaPredicted RBP24.44■■□□□ 1.5
CACNA1A-225ENST00000636389 ANP32BQ92688 251 aaKnown RBP24.39■■□□□ 1.5
CACNA1A-225ENST00000636389 EIF5BO60841 1220 aaKnown RBP24.36■■□□□ 1.49
CACNA1A-225ENST00000636389 HSP90AA1P07900 732 aaKnown RBP24.33■■□□□ 1.49
CACNA1A-225ENST00000636389 PLPPR3Q6T4P5 718 aa24.33■■□□□ 1.49
CACNA1A-225ENST00000636389 DIEXFQ68CQ4 756 aaKnown RBP24.31■■□□□ 1.48
CACNA1A-225ENST00000636389 NPM2Q86SE8 214 aaKnown RBP24.27■■□□□ 1.48
CACNA1A-225ENST00000636389 CDK11BP21127 795 aaKnown RBP24.24■■□□□ 1.47
CACNA1A-225ENST00000636389 ANP32CO43423 234 aa24.22■■□□□ 1.47
CACNA1A-225ENST00000636389 ANP32AP39687 249 aaKnown RBP24.17■■□□□ 1.46
CACNA1A-225ENST00000636389 FBLN2P98095 1184 aa24.11■■□□□ 1.45
CACNA1A-225ENST00000636389 A0A0G2JS52 829 aa24.1■■□□□ 1.45
CACNA1A-225ENST00000636389 LOC105371045A0A1W2PR82 267 aa24.04■■□□□ 1.44
CACNA1A-225ENST00000636389 SCAF1Q9H7N4 1312 aaKnown RBP24.04■■□□□ 1.44
CACNA1A-225ENST00000636389 ARXQ96QS3 562 aa24.03■■□□□ 1.44
CACNA1A-225ENST00000636389 ESF1Q9H501 851 aaKnown RBP24.03■■□□□ 1.44
CACNA1A-225ENST00000636389 TULP1O00294 542 aaPredicted RBP23.98■■□□□ 1.43
CACNA1A-225ENST00000636389 GLIPR1L2Q4G1C9 344 aa23.97■■□□□ 1.43
CACNA1A-225ENST00000636389 STAG3Q9UJ98 1225 aa23.94■■□□□ 1.42
CACNA1A-225ENST00000636389 UPF2Q9HAU5 1272 aaKnown RBP23.94■■□□□ 1.42
CACNA1A-225ENST00000636389 GTF3C3Q9Y5Q9 886 aa23.89■■□□□ 1.41
CACNA1A-225ENST00000636389 ARID3CA6NKF2 412 aa23.82■■□□□ 1.4
CACNA1A-225ENST00000636389 CHGAP10645 457 aaKnown RBP23.8■■□□□ 1.4
CACNA1A-225ENST00000636389 PLEKHG5O94827 1062 aa23.77■■□□□ 1.4
CACNA1A-225ENST00000636389 NCBP3Q53F19 620 aaKnown RBP23.75■■□□□ 1.39
CACNA1A-225ENST00000636389 ZNF777Q9ULD5 760 aaPredicted RBP23.7■■□□□ 1.39
CACNA1A-225ENST00000636389 SALL2Q9Y467 1007 aaPredicted RBP23.69■■□□□ 1.38
CACNA1A-225ENST00000636389 NBR1Q14596 966 aa23.68■■□□□ 1.38
CACNA1A-225ENST00000636389 ZBTB7CA1YPR0 619 aa23.67■■□□□ 1.38
CACNA1A-225ENST00000636389 TPRNQ4KMQ1 711 aa23.52■■□□□ 1.36
CACNA1A-225ENST00000636389 C14orf37Q86TY3 774 aa23.5■■□□□ 1.35
CACNA1A-225ENST00000636389 P3H3Q8IVL6 736 aa23.49■■□□□ 1.35
CACNA1A-225ENST00000636389 MYH16Q9H6N6 1097 aa23.49■■□□□ 1.35
CACNA1A-225ENST00000636389 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.47■■□□□ 1.35
CACNA1A-225ENST00000636389 SENP3Q9H4L4 574 aaPredicted RBP23.46■■□□□ 1.35
CACNA1A-225ENST00000636389 TAOK2Q9UL54 1235 aa23.45■■□□□ 1.34
CACNA1A-225ENST00000636389 FAM9BQ8IZU0 186 aa23.44■■□□□ 1.34
CACNA1A-225ENST00000636389 FKBP8Q14318 412 aa23.43■■□□□ 1.34
CACNA1A-225ENST00000636389 ZRSR1Q15695 479 aaKnown RBP23.43■■□□□ 1.34
CACNA1A-225ENST00000636389 NCLP19338 710 aaKnown RBP23.42■■□□□ 1.34
CACNA1A-225ENST00000636389 TRIM44Q96DX7 344 aaPredicted RBP23.38■■□□□ 1.33
CACNA1A-225ENST00000636389 HAP1P54257 671 aaPredicted RBP23.36■■□□□ 1.33
CACNA1A-225ENST00000636389 NPHP1O15259 732 aa23.36■■□□□ 1.33
CACNA1A-225ENST00000636389 TNNT2P45379 298 aaPredicted RBP23.35■■□□□ 1.33
CACNA1A-225ENST00000636389 WDR43Q15061 677 aaKnown RBP eCLIP23.34■■□□□ 1.33
CACNA1A-225ENST00000636389 HNRNPUQ00839 825 aaKnown RBP eCLIP23.33■■□□□ 1.32
CACNA1A-225ENST00000636389 DNTTIP2Q5QJE6 756 aaKnown RBP23.32■■□□□ 1.32
CACNA1A-225ENST00000636389 CLSTN1O94985 981 aa23.31■■□□□ 1.32
CACNA1A-225ENST00000636389 CCDC136Q96JN2 1154 aa23.31■■□□□ 1.32
CACNA1A-225ENST00000636389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.31■■□□□ 1.32
CACNA1A-225ENST00000636389 PTMAP06454 111 aaKnown RBP23.28■■□□□ 1.32
CACNA1A-225ENST00000636389 TMC1Q8TDI8 760 aa23.26■■□□□ 1.31
CACNA1A-225ENST00000636389 NPM1P06748 294 aaKnown RBP eCLIP23.26■■□□□ 1.31
CACNA1A-225ENST00000636389 PABPN1Q86U42 306 aaKnown RBP eCLIP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms