RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 DCAF8L2P0C7V8 631 aa29.93■■■□□ 2.38
CACNA1A-225ENST00000636389 PELP1Q8IZL8 1130 aaKnown RBP28.5■■■□□ 2.15
CACNA1A-225ENST00000636389 EHMT2Q96KQ7 1210 aa28.15■■■□□ 2.1
CACNA1A-225ENST00000636389 SUPT5HO00267 1087 aaKnown RBP27.82■■■□□ 2.04
CACNA1A-225ENST00000636389 ERICH6Q7L0X2 663 aa27.69■■■□□ 2.02
CACNA1A-225ENST00000636389 APLP2Q06481 763 aa27.48■■□□□ 1.99
CACNA1A-225ENST00000636389 FAM9AQ8IZU1 332 aaPredicted RBP27.37■■□□□ 1.97
CACNA1A-225ENST00000636389 CCER1Q8TC90 406 aaPredicted RBP27.25■■□□□ 1.95
CACNA1A-225ENST00000636389 TTBK1Q5TCY1 1321 aaPredicted RBP27.2■■□□□ 1.94
CACNA1A-225ENST00000636389 SHROOM4Q9ULL8 1493 aa27.05■■□□□ 1.92
CACNA1A-225ENST00000636389 MYT1Q01538 1121 aa26.88■■□□□ 1.89
CACNA1A-225ENST00000636389 RANGAP1P46060 587 aaPredicted RBP26.8■■□□□ 1.88
CACNA1A-225ENST00000636389 ATP1B4Q9UN42 357 aaPredicted RBP26.8■■□□□ 1.88
CACNA1A-225ENST00000636389 PCGF6Q9BYE7 350 aa26.63■■□□□ 1.85
CACNA1A-225ENST00000636389 CENPBP07199 599 aaPredicted RBP26.58■■□□□ 1.85
CACNA1A-225ENST00000636389 NEFLP07196 543 aa26.51■■□□□ 1.83
CACNA1A-225ENST00000636389 DAXXQ9UER7 740 aaPredicted RBP26.4■■□□□ 1.82
CACNA1A-225ENST00000636389 YTHDC1Q96MU7 727 aaKnown RBP26.3■■□□□ 1.8
CACNA1A-225ENST00000636389 MYT1LQ9UL68 1186 aa26.17■■□□□ 1.78
CACNA1A-225ENST00000636389 CHIC1Q5VXU3 224 aa26.03■■□□□ 1.76
CACNA1A-225ENST00000636389 POLR3GLQ9BT43 218 aa26.02■■□□□ 1.76
CACNA1A-225ENST00000636389 SLC4A1APQ9BWU0 796 aaKnown RBP25.88■■□□□ 1.73
CACNA1A-225ENST00000636389 CNGB1Q14028 1251 aaPredicted RBP25.85■■□□□ 1.73
CACNA1A-225ENST00000636389 UBTFP17480 764 aaKnown RBP25.82■■□□□ 1.72
CACNA1A-225ENST00000636389 ZEB1P37275 1124 aaPredicted RBP25.81■■□□□ 1.72
CACNA1A-225ENST00000636389 ZNF316A6NFI3 1004 aaPredicted RBP25.68■■□□□ 1.7
CACNA1A-225ENST00000636389 CLSPNQ9HAW4 1339 aa25.61■■□□□ 1.69
CACNA1A-225ENST00000636389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.6■■□□□ 1.69
CACNA1A-225ENST00000636389 HNRNPUL2Q1KMD3 747 aaKnown RBP25.6■■□□□ 1.69
CACNA1A-225ENST00000636389 TRIM41Q8WV44 630 aa25.56■■□□□ 1.68
CACNA1A-225ENST00000636389 NISCHQ9Y2I1 1504 aa25.52■■□□□ 1.68
CACNA1A-225ENST00000636389 PPARGC1BQ86YN6 1023 aaKnown RBP25.49■■□□□ 1.67
CACNA1A-225ENST00000636389 ITGAEP38570 1179 aa25.45■■□□□ 1.66
CACNA1A-225ENST00000636389 RTL5Q5HYW3 569 aaPredicted RBP25.39■■□□□ 1.65
CACNA1A-225ENST00000636389 SLC24A1O60721 1099 aa25.29■■□□□ 1.64
CACNA1A-225ENST00000636389 BCL11AQ9H165 835 aa25.24■■□□□ 1.63
CACNA1A-225ENST00000636389 ZBTB47Q9UFB7 747 aaPredicted RBP25.1■■□□□ 1.61
CACNA1A-225ENST00000636389 BCANQ96GW7 911 aa24.77■■□□□ 1.56
CACNA1A-225ENST00000636389 CANXP27824 592 aaKnown RBP24.71■■□□□ 1.55
CACNA1A-225ENST00000636389 TRIM26Q12899 539 aaPredicted RBP24.59■■□□□ 1.53
CACNA1A-225ENST00000636389 TRIM52Q96A61 297 aa24.57■■□□□ 1.52
CACNA1A-225ENST00000636389 ZNF326Q5BKZ1 582 aaKnown RBP24.53■■□□□ 1.52
CACNA1A-225ENST00000636389 NEFMP07197 916 aa24.53■■□□□ 1.52
CACNA1A-225ENST00000636389 FAM50AQ14320 339 aaKnown RBP24.53■■□□□ 1.52
CACNA1A-225ENST00000636389 HRCP23327 699 aa24.52■■□□□ 1.52
CACNA1A-225ENST00000636389 NEUROD1Q13562 356 aa24.45■■□□□ 1.5
CACNA1A-225ENST00000636389 CDK11AQ9UQ88 783 aaPredicted RBP24.44■■□□□ 1.5
CACNA1A-225ENST00000636389 ANP32BQ92688 251 aaKnown RBP24.39■■□□□ 1.5
CACNA1A-225ENST00000636389 EIF5BO60841 1220 aaKnown RBP24.36■■□□□ 1.49
CACNA1A-225ENST00000636389 HSP90AA1P07900 732 aaKnown RBP24.33■■□□□ 1.49
CACNA1A-225ENST00000636389 PLPPR3Q6T4P5 718 aa24.33■■□□□ 1.49
CACNA1A-225ENST00000636389 DIEXFQ68CQ4 756 aaKnown RBP24.31■■□□□ 1.48
CACNA1A-225ENST00000636389 NPM2Q86SE8 214 aaKnown RBP24.27■■□□□ 1.48
CACNA1A-225ENST00000636389 CDK11BP21127 795 aaKnown RBP24.24■■□□□ 1.47
CACNA1A-225ENST00000636389 ANP32CO43423 234 aa24.22■■□□□ 1.47
CACNA1A-225ENST00000636389 ANP32AP39687 249 aaKnown RBP24.17■■□□□ 1.46
CACNA1A-225ENST00000636389 FBLN2P98095 1184 aa24.11■■□□□ 1.45
CACNA1A-225ENST00000636389 A0A0G2JS52 829 aa24.1■■□□□ 1.45
CACNA1A-225ENST00000636389 LOC105371045A0A1W2PR82 267 aa24.04■■□□□ 1.44
CACNA1A-225ENST00000636389 SCAF1Q9H7N4 1312 aaKnown RBP24.04■■□□□ 1.44
CACNA1A-225ENST00000636389 ARXQ96QS3 562 aa24.03■■□□□ 1.44
CACNA1A-225ENST00000636389 ESF1Q9H501 851 aaKnown RBP24.03■■□□□ 1.44
CACNA1A-225ENST00000636389 TULP1O00294 542 aaPredicted RBP23.98■■□□□ 1.43
CACNA1A-225ENST00000636389 GLIPR1L2Q4G1C9 344 aa23.97■■□□□ 1.43
CACNA1A-225ENST00000636389 STAG3Q9UJ98 1225 aa23.94■■□□□ 1.42
CACNA1A-225ENST00000636389 UPF2Q9HAU5 1272 aaKnown RBP23.94■■□□□ 1.42
CACNA1A-225ENST00000636389 GTF3C3Q9Y5Q9 886 aa23.89■■□□□ 1.41
CACNA1A-225ENST00000636389 ARID3CA6NKF2 412 aa23.82■■□□□ 1.4
CACNA1A-225ENST00000636389 CHGAP10645 457 aaKnown RBP23.8■■□□□ 1.4
CACNA1A-225ENST00000636389 PLEKHG5O94827 1062 aa23.77■■□□□ 1.4
CACNA1A-225ENST00000636389 NCBP3Q53F19 620 aaKnown RBP23.75■■□□□ 1.39
CACNA1A-225ENST00000636389 ZNF777Q9ULD5 760 aaPredicted RBP23.7■■□□□ 1.39
CACNA1A-225ENST00000636389 SALL2Q9Y467 1007 aaPredicted RBP23.69■■□□□ 1.38
CACNA1A-225ENST00000636389 NBR1Q14596 966 aa23.68■■□□□ 1.38
CACNA1A-225ENST00000636389 ZBTB7CA1YPR0 619 aa23.67■■□□□ 1.38
CACNA1A-225ENST00000636389 TPRNQ4KMQ1 711 aa23.52■■□□□ 1.36
CACNA1A-225ENST00000636389 C14orf37Q86TY3 774 aa23.5■■□□□ 1.35
CACNA1A-225ENST00000636389 P3H3Q8IVL6 736 aa23.49■■□□□ 1.35
CACNA1A-225ENST00000636389 MYH16Q9H6N6 1097 aa23.49■■□□□ 1.35
CACNA1A-225ENST00000636389 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.47■■□□□ 1.35
CACNA1A-225ENST00000636389 SENP3Q9H4L4 574 aaPredicted RBP23.46■■□□□ 1.35
CACNA1A-225ENST00000636389 TAOK2Q9UL54 1235 aa23.45■■□□□ 1.34
CACNA1A-225ENST00000636389 FAM9BQ8IZU0 186 aa23.44■■□□□ 1.34
CACNA1A-225ENST00000636389 FKBP8Q14318 412 aa23.43■■□□□ 1.34
CACNA1A-225ENST00000636389 ZRSR1Q15695 479 aaKnown RBP23.43■■□□□ 1.34
CACNA1A-225ENST00000636389 NCLP19338 710 aaKnown RBP23.42■■□□□ 1.34
CACNA1A-225ENST00000636389 TRIM44Q96DX7 344 aaPredicted RBP23.38■■□□□ 1.33
CACNA1A-225ENST00000636389 HAP1P54257 671 aaPredicted RBP23.36■■□□□ 1.33
CACNA1A-225ENST00000636389 NPHP1O15259 732 aa23.36■■□□□ 1.33
CACNA1A-225ENST00000636389 TNNT2P45379 298 aaPredicted RBP23.35■■□□□ 1.33
CACNA1A-225ENST00000636389 WDR43Q15061 677 aaKnown RBP eCLIP23.34■■□□□ 1.33
CACNA1A-225ENST00000636389 HNRNPUQ00839 825 aaKnown RBP eCLIP23.33■■□□□ 1.32
CACNA1A-225ENST00000636389 DNTTIP2Q5QJE6 756 aaKnown RBP23.32■■□□□ 1.32
CACNA1A-225ENST00000636389 CLSTN1O94985 981 aa23.31■■□□□ 1.32
CACNA1A-225ENST00000636389 CCDC136Q96JN2 1154 aa23.31■■□□□ 1.32
CACNA1A-225ENST00000636389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.31■■□□□ 1.32
CACNA1A-225ENST00000636389 PTMAP06454 111 aaKnown RBP23.28■■□□□ 1.32
CACNA1A-225ENST00000636389 TMC1Q8TDI8 760 aa23.26■■□□□ 1.31
CACNA1A-225ENST00000636389 NPM1P06748 294 aaKnown RBP eCLIP23.26■■□□□ 1.31
CACNA1A-225ENST00000636389 PABPN1Q86U42 306 aaKnown RBP eCLIP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms