RNA–Protein interactions for RNA: ENST00000418381.5

UBR3-203, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 7,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-203ENST00000418381 DCAF8L2P0C7V8 631 aa31.21■■■□□ 2.59
UBR3-203ENST00000418381 EHMT2Q96KQ7 1210 aa29.06■■■□□ 2.24
UBR3-203ENST00000418381 SUPT5HO00267 1087 aaKnown RBP28.57■■■□□ 2.16
UBR3-203ENST00000418381 PELP1Q8IZL8 1130 aaKnown RBP28.23■■■□□ 2.11
UBR3-203ENST00000418381 FAM9AQ8IZU1 332 aaPredicted RBP28.15■■■□□ 2.1
UBR3-203ENST00000418381 APLP2Q06481 763 aa28.05■■■□□ 2.08
UBR3-203ENST00000418381 SHROOM4Q9ULL8 1493 aa27.99■■■□□ 2.07
UBR3-203ENST00000418381 TTBK1Q5TCY1 1321 aaPredicted RBP27.96■■■□□ 2.07
UBR3-203ENST00000418381 RANGAP1P46060 587 aaPredicted RBP27.75■■■□□ 2.03
UBR3-203ENST00000418381 ATP1B4Q9UN42 357 aaPredicted RBP27.71■■■□□ 2.03
UBR3-203ENST00000418381 ERICH6Q7L0X2 663 aa27.58■■■□□ 2.01
UBR3-203ENST00000418381 MYT1LQ9UL68 1186 aa27.18■■□□□ 1.94
UBR3-203ENST00000418381 CHIC1Q5VXU3 224 aa27.07■■□□□ 1.92
UBR3-203ENST00000418381 CCER1Q8TC90 406 aaPredicted RBP27.07■■□□□ 1.92
UBR3-203ENST00000418381 PCGF6Q9BYE7 350 aa26.99■■□□□ 1.91
UBR3-203ENST00000418381 MYT1Q01538 1121 aa26.75■■□□□ 1.87
UBR3-203ENST00000418381 POLR3GLQ9BT43 218 aa26.66■■□□□ 1.86
UBR3-203ENST00000418381 SLC4A1APQ9BWU0 796 aaKnown RBP26.61■■□□□ 1.85
UBR3-203ENST00000418381 NEFLP07196 543 aa26.54■■□□□ 1.84
UBR3-203ENST00000418381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.54■■□□□ 1.84
UBR3-203ENST00000418381 HNRNPUL2Q1KMD3 747 aaKnown RBP26.54■■□□□ 1.84
UBR3-203ENST00000418381 CNGB1Q14028 1251 aaPredicted RBP26.52■■□□□ 1.84
UBR3-203ENST00000418381 UBTFP17480 764 aaKnown RBP26.51■■□□□ 1.83
UBR3-203ENST00000418381 YTHDC1Q96MU7 727 aaKnown RBP26.5■■□□□ 1.83
UBR3-203ENST00000418381 DAXXQ9UER7 740 aaPredicted RBP26.43■■□□□ 1.82
UBR3-203ENST00000418381 CENPBP07199 599 aaPredicted RBP26.41■■□□□ 1.82
UBR3-203ENST00000418381 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
UBR3-203ENST00000418381 ITGAEP38570 1179 aa26.16■■□□□ 1.78
UBR3-203ENST00000418381 PPARGC1BQ86YN6 1023 aaKnown RBP26.15■■□□□ 1.78
UBR3-203ENST00000418381 NISCHQ9Y2I1 1504 aa26.15■■□□□ 1.78
UBR3-203ENST00000418381 SLC24A1O60721 1099 aa26.02■■□□□ 1.76
UBR3-203ENST00000418381 CLSPNQ9HAW4 1339 aa25.85■■□□□ 1.73
UBR3-203ENST00000418381 BCL11AQ9H165 835 aa25.84■■□□□ 1.73
UBR3-203ENST00000418381 ZEB1P37275 1124 aaPredicted RBP25.74■■□□□ 1.71
UBR3-203ENST00000418381 ZNF316A6NFI3 1004 aaPredicted RBP25.72■■□□□ 1.71
UBR3-203ENST00000418381 BCANQ96GW7 911 aa25.71■■□□□ 1.71
UBR3-203ENST00000418381 PLPPR3Q6T4P5 718 aa25.57■■□□□ 1.68
UBR3-203ENST00000418381 ZBTB47Q9UFB7 747 aaPredicted RBP25.43■■□□□ 1.66
UBR3-203ENST00000418381 FBLN2P98095 1184 aa25.27■■□□□ 1.64
UBR3-203ENST00000418381 TRIM52Q96A61 297 aa25.24■■□□□ 1.63
UBR3-203ENST00000418381 RTL5Q5HYW3 569 aaPredicted RBP25.21■■□□□ 1.63
UBR3-203ENST00000418381 FAM50AQ14320 339 aaKnown RBP25.2■■□□□ 1.62
UBR3-203ENST00000418381 ZNF326Q5BKZ1 582 aaKnown RBP25.2■■□□□ 1.62
UBR3-203ENST00000418381 CANXP27824 592 aaKnown RBP25.08■■□□□ 1.61
UBR3-203ENST00000418381 A0A0G2JS52 829 aa25.04■■□□□ 1.6
UBR3-203ENST00000418381 NEUROD1Q13562 356 aa25■■□□□ 1.59
UBR3-203ENST00000418381 NEFMP07197 916 aa25■■□□□ 1.59
UBR3-203ENST00000418381 SCAF1Q9H7N4 1312 aaKnown RBP24.99■■□□□ 1.59
UBR3-203ENST00000418381 ESF1Q9H501 851 aaKnown RBP24.97■■□□□ 1.59
UBR3-203ENST00000418381 ARID3CA6NKF2 412 aa24.85■■□□□ 1.57
UBR3-203ENST00000418381 STAG3Q9UJ98 1225 aa24.81■■□□□ 1.56
UBR3-203ENST00000418381 PLEKHG5O94827 1062 aa24.8■■□□□ 1.56
UBR3-203ENST00000418381 TRIM26Q12899 539 aaPredicted RBP24.74■■□□□ 1.55
UBR3-203ENST00000418381 CHGAP10645 457 aaKnown RBP24.67■■□□□ 1.54
UBR3-203ENST00000418381 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
UBR3-203ENST00000418381 LOC105371045A0A1W2PR82 267 aa24.58■■□□□ 1.53
UBR3-203ENST00000418381 ZNF777Q9ULD5 760 aaPredicted RBP24.57■■□□□ 1.52
UBR3-203ENST00000418381 ZBTB7CA1YPR0 619 aa24.56■■□□□ 1.52
UBR3-203ENST00000418381 TULP1O00294 542 aaPredicted RBP24.55■■□□□ 1.52
UBR3-203ENST00000418381 HRCP23327 699 aa24.52■■□□□ 1.52
UBR3-203ENST00000418381 SENP3Q9H4L4 574 aaPredicted RBP24.51■■□□□ 1.51
UBR3-203ENST00000418381 HSP90AA1P07900 732 aaKnown RBP24.49■■□□□ 1.51
UBR3-203ENST00000418381 CDK11BP21127 795 aaKnown RBP24.46■■□□□ 1.51
UBR3-203ENST00000418381 CDK11AQ9UQ88 783 aaPredicted RBP24.46■■□□□ 1.51
UBR3-203ENST00000418381 ANP32CO43423 234 aa24.45■■□□□ 1.5
UBR3-203ENST00000418381 NPM2Q86SE8 214 aaKnown RBP24.44■■□□□ 1.5
UBR3-203ENST00000418381 P3H3Q8IVL6 736 aa24.41■■□□□ 1.5
UBR3-203ENST00000418381 DIEXFQ68CQ4 756 aaKnown RBP24.36■■□□□ 1.49
UBR3-203ENST00000418381 C14orf37Q86TY3 774 aa24.35■■□□□ 1.49
UBR3-203ENST00000418381 ANP32BQ92688 251 aaKnown RBP24.31■■□□□ 1.48
UBR3-203ENST00000418381 NCBP3Q53F19 620 aaKnown RBP24.3■■□□□ 1.48
UBR3-203ENST00000418381 NPM1P06748 294 aaKnown RBP eCLIP24.29■■□□□ 1.48
UBR3-203ENST00000418381 ARXQ96QS3 562 aa24.28■■□□□ 1.48
UBR3-203ENST00000418381 HAP1P54257 671 aaPredicted RBP24.26■■□□□ 1.47
UBR3-203ENST00000418381 SALL2Q9Y467 1007 aaPredicted RBP24.19■■□□□ 1.46
UBR3-203ENST00000418381 ABCC9O60706 1549 aa24.14■■□□□ 1.46
UBR3-203ENST00000418381 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.14■■□□□ 1.453e-6■■■□□ 15.2
UBR3-203ENST00000418381 NPHP1O15259 732 aa24.11■■□□□ 1.45
UBR3-203ENST00000418381 ANP32AP39687 249 aaKnown RBP24.1■■□□□ 1.45
UBR3-203ENST00000418381 EIF5BO60841 1220 aaKnown RBP24.05■■□□□ 1.44
UBR3-203ENST00000418381 UPF2Q9HAU5 1272 aaKnown RBP24.02■■□□□ 1.44
UBR3-203ENST00000418381 TAOK2Q9UL54 1235 aa24.01■■□□□ 1.43
UBR3-203ENST00000418381 ARID4BQ4LE39 1312 aaPredicted RBP23.97■■□□□ 1.43
UBR3-203ENST00000418381 TPRNQ4KMQ1 711 aa23.91■■□□□ 1.42
UBR3-203ENST00000418381 PPP1R15AO75807 674 aaPredicted RBP23.86■■□□□ 1.41
UBR3-203ENST00000418381 LMOD2Q6P5Q4 547 aa23.82■■□□□ 1.4
UBR3-203ENST00000418381 MYH16Q9H6N6 1097 aa23.8■■□□□ 1.4
UBR3-203ENST00000418381 KDM2AQ9Y2K7 1162 aa23.79■■□□□ 1.4
UBR3-203ENST00000418381 FAM9BQ8IZU0 186 aa23.79■■□□□ 1.4
UBR3-203ENST00000418381 CLSTN1O94985 981 aa23.79■■□□□ 1.4
UBR3-203ENST00000418381 GTF3C3Q9Y5Q9 886 aa23.75■■□□□ 1.39
UBR3-203ENST00000418381 WDR43Q15061 677 aaKnown RBP eCLIP23.75■■□□□ 1.39
UBR3-203ENST00000418381 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.67■■□□□ 1.38
UBR3-203ENST00000418381 PPM1GO15355 546 aaPredicted RBP23.66■■□□□ 1.38
UBR3-203ENST00000418381 CHIC2Q9UKJ5 165 aa23.65■■□□□ 1.38
UBR3-203ENST00000418381 TRHP20396 242 aaPredicted RBP23.65■■□□□ 1.38
UBR3-203ENST00000418381 NBR1Q14596 966 aa23.63■■□□□ 1.37
UBR3-203ENST00000418381 TMC1Q8TDI8 760 aa23.61■■□□□ 1.37
UBR3-203ENST00000418381 ZRSR1Q15695 479 aaKnown RBP23.58■■□□□ 1.37
UBR3-203ENST00000418381 KCNH8Q96L42 1107 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms