Protein–RNA interactions for Protein: A6PVI3

NCBP2L, Nuclear cap-binding protein subunit 2-like, humanhuman

Known RBP Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2LA6PVI3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCBP2LA6PVI3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCBP2LA6PVI3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.59■□□□□ 0.89
NCBP2LA6PVI3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCBP2LA6PVI3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCBP2LA6PVI3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NCBP2LA6PVI3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
NCBP2LA6PVI3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCBP2LA6PVI3 LINC00273-201ENST00000539813 1452 ntBASIC20.59■□□□□ 0.89
NCBP2LA6PVI3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.59■□□□□ 0.89
NCBP2LA6PVI3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCBP2LA6PVI3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NCBP2LA6PVI3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCBP2LA6PVI3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.58■□□□□ 0.89
NCBP2LA6PVI3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.57■□□□□ 0.88
NCBP2LA6PVI3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.57■□□□□ 0.88
NCBP2LA6PVI3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.57■□□□□ 0.88
NCBP2LA6PVI3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCBP2LA6PVI3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.57■□□□□ 0.88
NCBP2LA6PVI3 ZNRF2P2-203ENST00000454624 420 ntBASIC20.57■□□□□ 0.88
NCBP2LA6PVI3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.57■□□□□ 0.88
NCBP2LA6PVI3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCBP2LA6PVI3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.56■□□□□ 0.88
NCBP2LA6PVI3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCBP2LA6PVI3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCBP2LA6PVI3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NCBP2LA6PVI3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCBP2LA6PVI3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NCBP2LA6PVI3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.54■□□□□ 0.88
NCBP2LA6PVI3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.54■□□□□ 0.88
NCBP2LA6PVI3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.54■□□□□ 0.88
NCBP2LA6PVI3 AP004833.2-201ENST00000532228 1454 ntBASIC20.54■□□□□ 0.88
NCBP2LA6PVI3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCBP2LA6PVI3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCBP2LA6PVI3 AC135983.2-203ENST00000454486 1613 ntBASIC20.53■□□□□ 0.88
NCBP2LA6PVI3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NCBP2LA6PVI3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.53■□□□□ 0.88
NCBP2LA6PVI3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NCBP2LA6PVI3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCBP2LA6PVI3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NCBP2LA6PVI3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCBP2LA6PVI3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NCBP2LA6PVI3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
NCBP2LA6PVI3 WHAMMP2-203ENST00000563942 1603 ntBASIC20.51■□□□□ 0.87
NCBP2LA6PVI3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCBP2LA6PVI3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NCBP2LA6PVI3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCBP2LA6PVI3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.5■□□□□ 0.87
NCBP2LA6PVI3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.5■□□□□ 0.87
NCBP2LA6PVI3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCBP2LA6PVI3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.49■□□□□ 0.87
NCBP2LA6PVI3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCBP2LA6PVI3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCBP2LA6PVI3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NCBP2LA6PVI3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCBP2LA6PVI3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCBP2LA6PVI3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCBP2LA6PVI3 LINC01971-201ENST00000617888 1048 ntBASIC20.48■□□□□ 0.87
NCBP2LA6PVI3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCBP2LA6PVI3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCBP2LA6PVI3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.47■□□□□ 0.87
NCBP2LA6PVI3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.47■□□□□ 0.87
NCBP2LA6PVI3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCBP2LA6PVI3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.47■□□□□ 0.87
NCBP2LA6PVI3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NCBP2LA6PVI3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.47■□□□□ 0.87
NCBP2LA6PVI3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCBP2LA6PVI3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.46■□□□□ 0.87
NCBP2LA6PVI3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCBP2LA6PVI3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCBP2LA6PVI3 MIR7108-201ENST00000614319 87 ntBASIC20.46■□□□□ 0.87
NCBP2LA6PVI3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCBP2LA6PVI3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.46■□□□□ 0.87
NCBP2LA6PVI3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCBP2LA6PVI3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.45■□□□□ 0.86
NCBP2LA6PVI3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.45■□□□□ 0.86
NCBP2LA6PVI3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.45■□□□□ 0.86
NCBP2LA6PVI3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.45■□□□□ 0.86
NCBP2LA6PVI3 AC100797.4-201ENST00000631653 1827 ntBASIC20.45■□□□□ 0.86
NCBP2LA6PVI3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCBP2LA6PVI3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.44■□□□□ 0.86
NCBP2LA6PVI3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCBP2LA6PVI3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.44■□□□□ 0.86
NCBP2LA6PVI3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
NCBP2LA6PVI3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.43■□□□□ 0.86
NCBP2LA6PVI3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCBP2LA6PVI3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.43■□□□□ 0.86
NCBP2LA6PVI3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.42■□□□□ 0.86
NCBP2LA6PVI3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCBP2LA6PVI3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.42■□□□□ 0.86
NCBP2LA6PVI3 DUX4L11-201ENST00000611504 1267 ntBASIC20.42■□□□□ 0.86
NCBP2LA6PVI3 DUX4L12-201ENST00000614593 1267 ntBASIC20.42■□□□□ 0.86
NCBP2LA6PVI3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.42■□□□□ 0.86
NCBP2LA6PVI3 DUX4L14-201ENST00000621227 1267 ntBASIC20.42■□□□□ 0.86
NCBP2LA6PVI3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCBP2LA6PVI3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.42■□□□□ 0.86
NCBP2LA6PVI3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCBP2LA6PVI3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCBP2LA6PVI3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCBP2LA6PVI3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms