Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC189A1A4V9 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.42■■□□□ 1.66
CCDC189A1A4V9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC189A1A4V9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC189A1A4V9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC189A1A4V9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.41■■□□□ 1.66
CCDC189A1A4V9 DRD5P2-201ENST00000421395 2012 ntBASIC25.41■■□□□ 1.66
CCDC189A1A4V9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.41■■□□□ 1.66
CCDC189A1A4V9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.41■■□□□ 1.66
CCDC189A1A4V9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC189A1A4V9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC189A1A4V9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC189A1A4V9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC189A1A4V9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.4■■□□□ 1.66
CCDC189A1A4V9 MIR762-201ENST00000390236 83 ntBASIC25.4■■□□□ 1.66
CCDC189A1A4V9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC189A1A4V9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.4■■□□□ 1.66
CCDC189A1A4V9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC189A1A4V9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC189A1A4V9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC189A1A4V9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC189A1A4V9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC189A1A4V9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.66
CCDC189A1A4V9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC189A1A4V9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.38■■□□□ 1.65
CCDC189A1A4V9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
CCDC189A1A4V9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
CCDC189A1A4V9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC189A1A4V9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.38■■□□□ 1.65
CCDC189A1A4V9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC189A1A4V9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.37■■□□□ 1.65
CCDC189A1A4V9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC189A1A4V9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
CCDC189A1A4V9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.37■■□□□ 1.65
CCDC189A1A4V9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
CCDC189A1A4V9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC189A1A4V9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC189A1A4V9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC189A1A4V9 AC127502.1-201ENST00000399971 1502 ntBASIC25.37■■□□□ 1.65
CCDC189A1A4V9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC189A1A4V9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC189A1A4V9 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC189A1A4V9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC189A1A4V9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.34■■□□□ 1.65
CCDC189A1A4V9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC189A1A4V9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.34■■□□□ 1.65
CCDC189A1A4V9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC189A1A4V9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC189A1A4V9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
CCDC189A1A4V9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC189A1A4V9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.33■■□□□ 1.65
CCDC189A1A4V9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC189A1A4V9 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC189A1A4V9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.33■■□□□ 1.65
CCDC189A1A4V9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC189A1A4V9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.32■■□□□ 1.64
CCDC189A1A4V9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.32■■□□□ 1.64
CCDC189A1A4V9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC189A1A4V9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.31■■□□□ 1.64
CCDC189A1A4V9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.31■■□□□ 1.64
CCDC189A1A4V9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC189A1A4V9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.31■■□□□ 1.64
CCDC189A1A4V9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC189A1A4V9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
CCDC189A1A4V9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC189A1A4V9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC189A1A4V9 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.29■■□□□ 1.64
CCDC189A1A4V9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.29■■□□□ 1.64
CCDC189A1A4V9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.29■■□□□ 1.64
CCDC189A1A4V9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
CCDC189A1A4V9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC189A1A4V9 SUZ12P1-203ENST00000578195 985 ntBASIC25.28■■□□□ 1.64
CCDC189A1A4V9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC189A1A4V9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC189A1A4V9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.27■■□□□ 1.64
CCDC189A1A4V9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.27■■□□□ 1.64
CCDC189A1A4V9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.26■■□□□ 1.63
CCDC189A1A4V9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC189A1A4V9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC189A1A4V9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
CCDC189A1A4V9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC189A1A4V9 AC005559.1-201ENST00000589661 871 ntBASIC25.25■■□□□ 1.63
CCDC189A1A4V9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC189A1A4V9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC189A1A4V9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC189A1A4V9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC189A1A4V9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CCDC189A1A4V9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.24■■□□□ 1.63
CCDC189A1A4V9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.23■■□□□ 1.63
CCDC189A1A4V9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC189A1A4V9 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CCDC189A1A4V9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCDC189A1A4V9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCDC189A1A4V9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.22■■□□□ 1.63
CCDC189A1A4V9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.22■■□□□ 1.63
CCDC189A1A4V9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCDC189A1A4V9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCDC189A1A4V9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.22■■□□□ 1.63
CCDC189A1A4V9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CCDC189A1A4V9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms