Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV9A0A0B4J1U6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV9A0A0B4J1U6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV9A0A0B4J1U6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TRBV9A0A0B4J1U6 AC044849.2-201ENST00000606596 710 ntBASIC20.27■□□□□ 0.84
TRBV9A0A0B4J1U6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV9A0A0B4J1U6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV9A0A0B4J1U6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV9A0A0B4J1U6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRBV9A0A0B4J1U6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.26■□□□□ 0.83
TRBV9A0A0B4J1U6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV9A0A0B4J1U6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.26■□□□□ 0.83
TRBV9A0A0B4J1U6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV9A0A0B4J1U6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.25■□□□□ 0.83
TRBV9A0A0B4J1U6 AP004833.2-201ENST00000532228 1454 ntBASIC20.24■□□□□ 0.83
TRBV9A0A0B4J1U6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV9A0A0B4J1U6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV9A0A0B4J1U6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV9A0A0B4J1U6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRBV9A0A0B4J1U6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV9A0A0B4J1U6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV9A0A0B4J1U6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.22■□□□□ 0.83
TRBV9A0A0B4J1U6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.22■□□□□ 0.83
TRBV9A0A0B4J1U6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.22■□□□□ 0.83
TRBV9A0A0B4J1U6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV9A0A0B4J1U6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRBV9A0A0B4J1U6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TRBV9A0A0B4J1U6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.2■□□□□ 0.82
TRBV9A0A0B4J1U6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
TRBV9A0A0B4J1U6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV9A0A0B4J1U6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.2■□□□□ 0.82
TRBV9A0A0B4J1U6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRBV9A0A0B4J1U6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV9A0A0B4J1U6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV9A0A0B4J1U6 RPS2P35-201ENST00000443417 897 ntBASIC20.19■□□□□ 0.82
TRBV9A0A0B4J1U6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV9A0A0B4J1U6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV9A0A0B4J1U6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV9A0A0B4J1U6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV9A0A0B4J1U6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV9A0A0B4J1U6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.18■□□□□ 0.82
TRBV9A0A0B4J1U6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.17■□□□□ 0.82
TRBV9A0A0B4J1U6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV9A0A0B4J1U6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV9A0A0B4J1U6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV9A0A0B4J1U6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.17■□□□□ 0.82
TRBV9A0A0B4J1U6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.17■□□□□ 0.82
TRBV9A0A0B4J1U6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV9A0A0B4J1U6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.16■□□□□ 0.82
TRBV9A0A0B4J1U6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV9A0A0B4J1U6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.16■□□□□ 0.82
TRBV9A0A0B4J1U6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRBV9A0A0B4J1U6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV9A0A0B4J1U6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.15■□□□□ 0.82
TRBV9A0A0B4J1U6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.15■□□□□ 0.82
TRBV9A0A0B4J1U6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV9A0A0B4J1U6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TRBV9A0A0B4J1U6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV9A0A0B4J1U6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV9A0A0B4J1U6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TRBV9A0A0B4J1U6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV9A0A0B4J1U6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.14■□□□□ 0.81
TRBV9A0A0B4J1U6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV9A0A0B4J1U6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TRBV9A0A0B4J1U6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.13■□□□□ 0.81
TRBV9A0A0B4J1U6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV9A0A0B4J1U6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV9A0A0B4J1U6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV9A0A0B4J1U6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV9A0A0B4J1U6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV9A0A0B4J1U6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV9A0A0B4J1U6 LINC00273-201ENST00000539813 1452 ntBASIC20.11■□□□□ 0.81
TRBV9A0A0B4J1U6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TRBV9A0A0B4J1U6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV9A0A0B4J1U6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.11■□□□□ 0.81
TRBV9A0A0B4J1U6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV9A0A0B4J1U6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV9A0A0B4J1U6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.1■□□□□ 0.81
TRBV9A0A0B4J1U6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.1■□□□□ 0.81
TRBV9A0A0B4J1U6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV9A0A0B4J1U6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV9A0A0B4J1U6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV9A0A0B4J1U6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV9A0A0B4J1U6 AL121749.1-202ENST00000609313 2153 ntBASIC20.1■□□□□ 0.81
TRBV9A0A0B4J1U6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV9A0A0B4J1U6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV9A0A0B4J1U6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.09■□□□□ 0.81
TRBV9A0A0B4J1U6 AC135983.2-203ENST00000454486 1613 ntBASIC20.09■□□□□ 0.81
TRBV9A0A0B4J1U6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TRBV9A0A0B4J1U6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRBV9A0A0B4J1U6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRBV9A0A0B4J1U6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRBV9A0A0B4J1U6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TRBV9A0A0B4J1U6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TRBV9A0A0B4J1U6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV9A0A0B4J1U6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
TRBV9A0A0B4J1U6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TRBV9A0A0B4J1U6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV9A0A0B4J1U6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV9A0A0B4J1U6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms