Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 AC044849.2-201ENST00000606596 710 ntBASIC18.48■□□□□ 0.55
TRGV1A0A0A0MS02 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRGV1A0A0A0MS02 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.48■□□□□ 0.55
TRGV1A0A0A0MS02 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRGV1A0A0A0MS02 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.47■□□□□ 0.55
TRGV1A0A0A0MS02 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.47■□□□□ 0.55
TRGV1A0A0A0MS02 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.47■□□□□ 0.55
TRGV1A0A0A0MS02 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.47■□□□□ 0.55
TRGV1A0A0A0MS02 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRGV1A0A0A0MS02 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRGV1A0A0A0MS02 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.46■□□□□ 0.55
TRGV1A0A0A0MS02 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRGV1A0A0A0MS02 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.46■□□□□ 0.54
TRGV1A0A0A0MS02 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRGV1A0A0A0MS02 DRD5P2-201ENST00000421395 2012 ntBASIC18.45■□□□□ 0.54
TRGV1A0A0A0MS02 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRGV1A0A0A0MS02 AC142086.6-201ENST00000621154 1765 ntBASIC18.45■□□□□ 0.54
TRGV1A0A0A0MS02 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.45■□□□□ 0.54
TRGV1A0A0A0MS02 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV1A0A0A0MS02 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV1A0A0A0MS02 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.44■□□□□ 0.54
TRGV1A0A0A0MS02 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV1A0A0A0MS02 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV1A0A0A0MS02 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV1A0A0A0MS02 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRGV1A0A0A0MS02 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRGV1A0A0A0MS02 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRGV1A0A0A0MS02 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRGV1A0A0A0MS02 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRGV1A0A0A0MS02 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV1A0A0A0MS02 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV1A0A0A0MS02 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV1A0A0A0MS02 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRGV1A0A0A0MS02 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV1A0A0A0MS02 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV1A0A0A0MS02 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV1A0A0A0MS02 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV1A0A0A0MS02 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.42■□□□□ 0.54
TRGV1A0A0A0MS02 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.41■□□□□ 0.54
TRGV1A0A0A0MS02 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRGV1A0A0A0MS02 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRGV1A0A0A0MS02 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.41■□□□□ 0.54
TRGV1A0A0A0MS02 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRGV1A0A0A0MS02 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV1A0A0A0MS02 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV1A0A0A0MS02 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV1A0A0A0MS02 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.4■□□□□ 0.54
TRGV1A0A0A0MS02 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV1A0A0A0MS02 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV1A0A0A0MS02 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV1A0A0A0MS02 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRGV1A0A0A0MS02 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV1A0A0A0MS02 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV1A0A0A0MS02 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV1A0A0A0MS02 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.39■□□□□ 0.53
TRGV1A0A0A0MS02 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
TRGV1A0A0A0MS02 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV1A0A0A0MS02 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV1A0A0A0MS02 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV1A0A0A0MS02 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TRGV1A0A0A0MS02 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV1A0A0A0MS02 AC100797.4-201ENST00000631653 1827 ntBASIC18.38■□□□□ 0.53
TRGV1A0A0A0MS02 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TRGV1A0A0A0MS02 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV1A0A0A0MS02 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.38■□□□□ 0.53
TRGV1A0A0A0MS02 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRGV1A0A0A0MS02 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
TRGV1A0A0A0MS02 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV1A0A0A0MS02 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV1A0A0A0MS02 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV1A0A0A0MS02 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV1A0A0A0MS02 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRGV1A0A0A0MS02 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.36■□□□□ 0.53
TRGV1A0A0A0MS02 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV1A0A0A0MS02 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV1A0A0A0MS02 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV1A0A0A0MS02 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.35■□□□□ 0.53
TRGV1A0A0A0MS02 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV1A0A0A0MS02 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV1A0A0A0MS02 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRGV1A0A0A0MS02 RPS2P35-201ENST00000443417 897 ntBASIC18.35■□□□□ 0.53
TRGV1A0A0A0MS02 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.35■□□□□ 0.53
TRGV1A0A0A0MS02 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.35■□□□□ 0.53
TRGV1A0A0A0MS02 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV1A0A0A0MS02 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRGV1A0A0A0MS02 LINC00273-201ENST00000539813 1452 ntBASIC18.34■□□□□ 0.53
TRGV1A0A0A0MS02 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV1A0A0A0MS02 AC135983.2-203ENST00000454486 1613 ntBASIC18.34■□□□□ 0.53
TRGV1A0A0A0MS02 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRGV1A0A0A0MS02 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRGV1A0A0A0MS02 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRGV1A0A0A0MS02 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.33■□□□□ 0.52
TRGV1A0A0A0MS02 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV1A0A0A0MS02 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV1A0A0A0MS02 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.33■□□□□ 0.52
TRGV1A0A0A0MS02 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV1A0A0A0MS02 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV1A0A0A0MS02 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.32■□□□□ 0.52
TRGV1A0A0A0MS02 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV1A0A0A0MS02 WHAMMP2-203ENST00000563942 1603 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms