Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRAV9-2A0A087WT02 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRAV9-2A0A087WT02 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV9-2A0A087WT02 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV9-2A0A087WT02 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV9-2A0A087WT02 SETD8P1-201ENST00000623146 1180 ntBASIC18.87■□□□□ 0.61
TRAV9-2A0A087WT02 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV9-2A0A087WT02 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV9-2A0A087WT02 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV9-2A0A087WT02 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV9-2A0A087WT02 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV9-2A0A087WT02 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAV9-2A0A087WT02 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV9-2A0A087WT02 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV9-2A0A087WT02 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV9-2A0A087WT02 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV9-2A0A087WT02 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV9-2A0A087WT02 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV9-2A0A087WT02 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAV9-2A0A087WT02 AC093323.1-202ENST00000635031 2045 ntBASIC18.83■□□□□ 0.6
TRAV9-2A0A087WT02 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV9-2A0A087WT02 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRAV9-2A0A087WT02 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV9-2A0A087WT02 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRAV9-2A0A087WT02 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV9-2A0A087WT02 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV9-2A0A087WT02 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV9-2A0A087WT02 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAV9-2A0A087WT02 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV9-2A0A087WT02 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.81■□□□□ 0.6
TRAV9-2A0A087WT02 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV9-2A0A087WT02 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV9-2A0A087WT02 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV9-2A0A087WT02 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
TRAV9-2A0A087WT02 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV9-2A0A087WT02 AC097358.2-201ENST00000607541 1159 ntBASIC18.8■□□□□ 0.6
TRAV9-2A0A087WT02 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV9-2A0A087WT02 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV9-2A0A087WT02 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV9-2A0A087WT02 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV9-2A0A087WT02 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV9-2A0A087WT02 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRAV9-2A0A087WT02 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV9-2A0A087WT02 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV9-2A0A087WT02 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV9-2A0A087WT02 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV9-2A0A087WT02 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV9-2A0A087WT02 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV9-2A0A087WT02 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV9-2A0A087WT02 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.76■□□□□ 0.59
TRAV9-2A0A087WT02 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV9-2A0A087WT02 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV9-2A0A087WT02 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV9-2A0A087WT02 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV9-2A0A087WT02 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV9-2A0A087WT02 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV9-2A0A087WT02 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.75■□□□□ 0.59
TRAV9-2A0A087WT02 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV9-2A0A087WT02 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV9-2A0A087WT02 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV9-2A0A087WT02 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV9-2A0A087WT02 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV9-2A0A087WT02 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV9-2A0A087WT02 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV9-2A0A087WT02 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV9-2A0A087WT02 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV9-2A0A087WT02 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV9-2A0A087WT02 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV9-2A0A087WT02 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV9-2A0A087WT02 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV9-2A0A087WT02 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV9-2A0A087WT02 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV9-2A0A087WT02 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV9-2A0A087WT02 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV9-2A0A087WT02 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TRAV9-2A0A087WT02 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV9-2A0A087WT02 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV9-2A0A087WT02 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRAV9-2A0A087WT02 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV9-2A0A087WT02 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV9-2A0A087WT02 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV9-2A0A087WT02 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV9-2A0A087WT02 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRAV9-2A0A087WT02 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV9-2A0A087WT02 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV9-2A0A087WT02 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV9-2A0A087WT02 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV9-2A0A087WT02 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV9-2A0A087WT02 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TRAV9-2A0A087WT02 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV9-2A0A087WT02 AC020928.2-201ENST00000588717 2197 ntBASIC18.67■□□□□ 0.58
TRAV9-2A0A087WT02 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRAV9-2A0A087WT02 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV9-2A0A087WT02 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV9-2A0A087WT02 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV9-2A0A087WT02 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRAV9-2A0A087WT02 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV9-2A0A087WT02 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV9-2A0A087WT02 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAV9-2A0A087WT02 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms