Protein–RNA interactions for Protein: A0A075B6U4

TRAV7, T-cell receptor alpha variable 7 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV7A0A075B6U4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV7A0A075B6U4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV7A0A075B6U4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRAV7A0A075B6U4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV7A0A075B6U4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRAV7A0A075B6U4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV7A0A075B6U4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV7A0A075B6U4 DRD5P2-201ENST00000421395 2012 ntBASIC15.37■□□□□ 0.05
TRAV7A0A075B6U4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV7A0A075B6U4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV7A0A075B6U4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV7A0A075B6U4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV7A0A075B6U4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV7A0A075B6U4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV7A0A075B6U4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV7A0A075B6U4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV7A0A075B6U4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TRAV7A0A075B6U4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV7A0A075B6U4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV7A0A075B6U4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TRAV7A0A075B6U4 AC020928.2-201ENST00000588717 2197 ntBASIC15.35■□□□□ 0.05
TRAV7A0A075B6U4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV7A0A075B6U4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV7A0A075B6U4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV7A0A075B6U4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV7A0A075B6U4 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV7A0A075B6U4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV7A0A075B6U4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAV7A0A075B6U4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV7A0A075B6U4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV7A0A075B6U4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV7A0A075B6U4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV7A0A075B6U4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV7A0A075B6U4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV7A0A075B6U4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV7A0A075B6U4 AC012676.1-201ENST00000574705 1949 ntBASIC15.31■□□□□ 0.04
TRAV7A0A075B6U4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRAV7A0A075B6U4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV7A0A075B6U4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV7A0A075B6U4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV7A0A075B6U4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV7A0A075B6U4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV7A0A075B6U4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
TRAV7A0A075B6U4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV7A0A075B6U4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRAV7A0A075B6U4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV7A0A075B6U4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV7A0A075B6U4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV7A0A075B6U4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV7A0A075B6U4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV7A0A075B6U4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV7A0A075B6U4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRAV7A0A075B6U4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV7A0A075B6U4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV7A0A075B6U4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV7A0A075B6U4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV7A0A075B6U4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV7A0A075B6U4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV7A0A075B6U4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV7A0A075B6U4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV7A0A075B6U4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV7A0A075B6U4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRAV7A0A075B6U4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV7A0A075B6U4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV7A0A075B6U4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRAV7A0A075B6U4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV7A0A075B6U4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV7A0A075B6U4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV7A0A075B6U4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV7A0A075B6U4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV7A0A075B6U4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
TRAV7A0A075B6U4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV7A0A075B6U4 AC133561.1-201ENST00000568600 2415 ntBASIC15.26■□□□□ 0.03
TRAV7A0A075B6U4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV7A0A075B6U4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV7A0A075B6U4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV7A0A075B6U4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV7A0A075B6U4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV7A0A075B6U4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV7A0A075B6U4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV7A0A075B6U4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV7A0A075B6U4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV7A0A075B6U4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV7A0A075B6U4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV7A0A075B6U4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV7A0A075B6U4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV7A0A075B6U4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV7A0A075B6U4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV7A0A075B6U4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV7A0A075B6U4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAV7A0A075B6U4 AC079834.2-201ENST00000609776 1949 ntBASIC15.22■□□□□ 0.03
TRAV7A0A075B6U4 CLDN5-201ENST00000403084 2357 ntBASIC15.22■□□□□ 0.03
TRAV7A0A075B6U4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV7A0A075B6U4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV7A0A075B6U4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV7A0A075B6U4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV7A0A075B6U4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV7A0A075B6U4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV7A0A075B6U4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV7A0A075B6U4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms