Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 POM121L13P-201ENST00000422362 380 ntBASIC18.9■□□□□ 0.62
KRT78Q8N1N4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 AP003097.1-201ENST00000530657 1135 ntBASIC18.9■□□□□ 0.62
KRT78Q8N1N4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
KRT78Q8N1N4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
KRT78Q8N1N4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
KRT78Q8N1N4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.89■□□□□ 0.62
KRT78Q8N1N4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
KRT78Q8N1N4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.89■□□□□ 0.62
KRT78Q8N1N4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT78Q8N1N4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 RNF165-205ENST00000588679 2904 ntBASIC18.88■□□□□ 0.61
KRT78Q8N1N4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 AP006587.1-201ENST00000534129 1502 ntBASIC18.88■□□□□ 0.61
KRT78Q8N1N4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT78Q8N1N4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT78Q8N1N4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms