RNA–Protein interactions for RNA: ENST00000640141.1

KCNMA1-278, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-278ENST00000640141 DCAF8L2P0C7V8 631 aa31.87■■■□□ 2.69
KCNMA1-278ENST00000640141 SUPT5HO00267 1087 aaKnown RBP30.17■■■□□ 2.42
KCNMA1-278ENST00000640141 NISCHQ9Y2I1 1504 aa30.07■■■□□ 2.4
KCNMA1-278ENST00000640141 SHROOM4Q9ULL8 1493 aa29.52■■■□□ 2.32
KCNMA1-278ENST00000640141 EHMT2Q96KQ7 1210 aa29.15■■■□□ 2.26
KCNMA1-278ENST00000640141 APLP2Q06481 763 aa28.94■■■□□ 2.22
KCNMA1-278ENST00000640141 PELP1Q8IZL8 1130 aaKnown RBP28.85■■■□□ 2.21
KCNMA1-278ENST00000640141 FAM9AQ8IZU1 332 aaPredicted RBP28.59■■■□□ 2.17
KCNMA1-278ENST00000640141 TTBK1Q5TCY1 1321 aaPredicted RBP28.19■■■□□ 2.1
KCNMA1-278ENST00000640141 PCGF6Q9BYE7 350 aa28.1■■■□□ 2.09
KCNMA1-278ENST00000640141 TRIM41Q8WV44 630 aa28.01■■■□□ 2.07
KCNMA1-278ENST00000640141 RANGAP1P46060 587 aaPredicted RBP27.97■■■□□ 2.07
KCNMA1-278ENST00000640141 ZEB1P37275 1124 aaPredicted RBP27.87■■■□□ 2.05
KCNMA1-278ENST00000640141 ATP1B4Q9UN42 357 aaPredicted RBP27.84■■■□□ 2.05
KCNMA1-278ENST00000640141 CCER1Q8TC90 406 aaPredicted RBP27.77■■■□□ 2.04
KCNMA1-278ENST00000640141 CENPBP07199 599 aaPredicted RBP27.77■■■□□ 2.04
KCNMA1-278ENST00000640141 UBTFP17480 764 aaKnown RBP27.74■■■□□ 2.03
KCNMA1-278ENST00000640141 ERICH6Q7L0X2 663 aa27.55■■■□□ 2
KCNMA1-278ENST00000640141 NEFLP07196 543 aa27.28■■□□□ 1.96
KCNMA1-278ENST00000640141 YTHDC1Q96MU7 727 aaKnown RBP27.05■■□□□ 1.92
KCNMA1-278ENST00000640141 PPARGC1BQ86YN6 1023 aaKnown RBP27.05■■□□□ 1.92
KCNMA1-278ENST00000640141 TRIM26Q12899 539 aaPredicted RBP26.99■■□□□ 1.91
KCNMA1-278ENST00000640141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.9■■□□□ 1.9
KCNMA1-278ENST00000640141 HNRNPUL2Q1KMD3 747 aaKnown RBP26.9■■□□□ 1.9
KCNMA1-278ENST00000640141 MYT1LQ9UL68 1186 aa26.87■■□□□ 1.89
KCNMA1-278ENST00000640141 ITGAEP38570 1179 aa26.82■■□□□ 1.88
KCNMA1-278ENST00000640141 POLR3GLQ9BT43 218 aa26.67■■□□□ 1.86
KCNMA1-278ENST00000640141 CHIC1Q5VXU3 224 aa26.6■■□□□ 1.85
KCNMA1-278ENST00000640141 LOC105371045A0A1W2PR82 267 aa26.58■■□□□ 1.85
KCNMA1-278ENST00000640141 HRCP23327 699 aa26.57■■□□□ 1.84
KCNMA1-278ENST00000640141 MYT1Q01538 1121 aa26.54■■□□□ 1.84
KCNMA1-278ENST00000640141 DAXXQ9UER7 740 aaPredicted RBP26.51■■□□□ 1.83
KCNMA1-278ENST00000640141 CNGB1Q14028 1251 aaPredicted RBP26.31■■□□□ 1.8
KCNMA1-278ENST00000640141 SLC4A1APQ9BWU0 796 aaKnown RBP26.23■■□□□ 1.79
KCNMA1-278ENST00000640141 FAM50AQ14320 339 aaKnown RBP26.17■■□□□ 1.78
KCNMA1-278ENST00000640141 PABPN1Q86U42 306 aaKnown RBP eCLIP26.11■■□□□ 1.77
KCNMA1-278ENST00000640141 TRIM52Q96A61 297 aa26.07■■□□□ 1.76
KCNMA1-278ENST00000640141 ABCC9O60706 1549 aa26.07■■□□□ 1.76
KCNMA1-278ENST00000640141 DIEXFQ68CQ4 756 aaKnown RBP26.03■■□□□ 1.76
KCNMA1-278ENST00000640141 CLSPNQ9HAW4 1339 aa25.96■■□□□ 1.75
KCNMA1-278ENST00000640141 NEUROD1Q13562 356 aa25.89■■□□□ 1.74
KCNMA1-278ENST00000640141 ZNF316A6NFI3 1004 aaPredicted RBP25.86■■□□□ 1.73
KCNMA1-278ENST00000640141 RTL5Q5HYW3 569 aaPredicted RBP25.8■■□□□ 1.72
KCNMA1-278ENST00000640141 FBLN2P98095 1184 aa25.76■■□□□ 1.71
KCNMA1-278ENST00000640141 ZNF326Q5BKZ1 582 aaKnown RBP25.73■■□□□ 1.71
KCNMA1-278ENST00000640141 ANP32CO43423 234 aa25.71■■□□□ 1.71
KCNMA1-278ENST00000640141 ZBTB47Q9UFB7 747 aaPredicted RBP25.57■■□□□ 1.68
KCNMA1-278ENST00000640141 CSRNP3Q8WYN3 585 aa25.53■■□□□ 1.68
KCNMA1-278ENST00000640141 P3H3Q8IVL6 736 aa25.48■■□□□ 1.67
KCNMA1-278ENST00000640141 BCANQ96GW7 911 aa25.46■■□□□ 1.67
KCNMA1-278ENST00000640141 NEFMP07197 916 aa25.44■■□□□ 1.66
KCNMA1-278ENST00000640141 CDK11AQ9UQ88 783 aaPredicted RBP25.43■■□□□ 1.66
KCNMA1-278ENST00000640141 ARID3CA6NKF2 412 aa25.4■■□□□ 1.66
KCNMA1-278ENST00000640141 CANXP27824 592 aaKnown RBP25.39■■□□□ 1.65
KCNMA1-278ENST00000640141 GTF3C3Q9Y5Q9 886 aa25.36■■□□□ 1.65
KCNMA1-278ENST00000640141 ZNF777Q9ULD5 760 aaPredicted RBP25.35■■□□□ 1.65
KCNMA1-278ENST00000640141 SLC24A1O60721 1099 aa25.33■■□□□ 1.65
KCNMA1-278ENST00000640141 ESF1Q9H501 851 aaKnown RBP25.18■■□□□ 1.62
KCNMA1-278ENST00000640141 BCL11AQ9H165 835 aa25.16■■□□□ 1.62
KCNMA1-278ENST00000640141 TONSLQ96HA7 1378 aa25.09■■□□□ 1.61
KCNMA1-278ENST00000640141 SCRIBQ14160 1630 aa25.08■■□□□ 1.6
KCNMA1-278ENST00000640141 NPM1P06748 294 aaKnown RBP eCLIP25.04■■□□□ 1.6
KCNMA1-278ENST00000640141 STAG3Q9UJ98 1225 aa25.03■■□□□ 1.6
KCNMA1-278ENST00000640141 CHGAP10645 457 aaKnown RBP25.03■■□□□ 1.6
KCNMA1-278ENST00000640141 ANP32AP39687 249 aaKnown RBP25.02■■□□□ 1.6
KCNMA1-278ENST00000640141 ACIN1Q9UKV3 1341 aaKnown RBP25■■□□□ 1.59
KCNMA1-278ENST00000640141 HNRNPUQ00839 825 aaKnown RBP eCLIP24.83■■□□□ 1.57
KCNMA1-278ENST00000640141 NPM2Q86SE8 214 aaKnown RBP24.83■■□□□ 1.57
KCNMA1-278ENST00000640141 ZCCHC6Q5VYS8 1495 aaKnown RBP24.83■■□□□ 1.56
KCNMA1-278ENST00000640141 TSPY4P0CV99 314 aa24.81■■□□□ 1.56
KCNMA1-278ENST00000640141 TSPY10P0CW01 314 aa24.81■■□□□ 1.56
KCNMA1-278ENST00000640141 DDX10Q13206 875 aaKnown RBP24.81■■□□□ 1.56
KCNMA1-278ENST00000640141 CHIC2Q9UKJ5 165 aa24.81■■□□□ 1.56
KCNMA1-278ENST00000640141 FAM9BQ8IZU0 186 aa24.79■■□□□ 1.56
KCNMA1-278ENST00000640141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.79■■□□□ 1.56
KCNMA1-278ENST00000640141 FKBP8Q14318 412 aa24.78■■□□□ 1.56
KCNMA1-278ENST00000640141 UPF2Q9HAU5 1272 aaKnown RBP24.76■■□□□ 1.55
KCNMA1-278ENST00000640141 DCAF1Q9Y4B6 1507 aa24.75■■□□□ 1.55
KCNMA1-278ENST00000640141 PLPPR3Q6T4P5 718 aa24.74■■□□□ 1.55
KCNMA1-278ENST00000640141 HSP90AA1P07900 732 aaKnown RBP24.73■■□□□ 1.55
KCNMA1-278ENST00000640141 TMC1Q8TDI8 760 aa24.73■■□□□ 1.55
KCNMA1-278ENST00000640141 MTUS2Q5JR59 1369 aa24.72■■□□□ 1.55
KCNMA1-278ENST00000640141 ANP32BQ92688 251 aaKnown RBP24.68■■□□□ 1.54
KCNMA1-278ENST00000640141 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.68■■□□□ 1.54
KCNMA1-278ENST00000640141 CHMP7Q8WUX9 453 aaPredicted RBP24.68■■□□□ 1.54
KCNMA1-278ENST00000640141 SALL2Q9Y467 1007 aaPredicted RBP24.66■■□□□ 1.54
KCNMA1-278ENST00000640141 WDR43Q15061 677 aaKnown RBP eCLIP24.65■■□□□ 1.54
KCNMA1-278ENST00000640141 KDM2AQ9Y2K7 1162 aa24.62■■□□□ 1.53
KCNMA1-278ENST00000640141 MRS2Q9HD23 443 aa24.57■■□□□ 1.52
KCNMA1-278ENST00000640141 CCDC136Q96JN2 1154 aa24.57■■□□□ 1.52
KCNMA1-278ENST00000640141 CLIP1P30622 1438 aa24.56■■□□□ 1.52
KCNMA1-278ENST00000640141 CCDC180Q9P1Z9 1646 aa24.54■■□□□ 1.52
KCNMA1-278ENST00000640141 EIF4G2P78344 907 aaKnown RBP eCLIP24.48■■□□□ 1.51
KCNMA1-278ENST00000640141 RSF1Q96T23 1441 aaPredicted RBP24.45■■□□□ 1.5
KCNMA1-278ENST00000640141 PLEKHD1A6NEE1 506 aa24.44■■□□□ 1.5
KCNMA1-278ENST00000640141 RRP7BPQ9NSQ0 103 aa24.43■■□□□ 1.5
KCNMA1-278ENST00000640141 EEA1Q15075 1411 aa24.42■■□□□ 1.5
KCNMA1-278ENST00000640141 RB1CC1Q8TDY2 1594 aa24.39■■□□□ 1.5
KCNMA1-278ENST00000640141 MYH16Q9H6N6 1097 aa24.38■■□□□ 1.49
KCNMA1-278ENST00000640141 KCNH8Q96L42 1107 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms