RNA–Protein interactions for RNA: ENST00000437974.5

ARHGEF28-204, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARHGEF28, Length 5,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-204ENST00000437974 DCAF8L2P0C7V8 631 aa32.09■■■□□ 2.73
ARHGEF28-204ENST00000437974 SUPT5HO00267 1087 aaKnown RBP30.02■■■□□ 2.4
ARHGEF28-204ENST00000437974 NISCHQ9Y2I1 1504 aa29.95■■■□□ 2.39
ARHGEF28-204ENST00000437974 SHROOM4Q9ULL8 1493 aa29.44■■■□□ 2.3
ARHGEF28-204ENST00000437974 EHMT2Q96KQ7 1210 aa29.22■■■□□ 2.27
ARHGEF28-204ENST00000437974 APLP2Q06481 763 aa28.92■■■□□ 2.22
ARHGEF28-204ENST00000437974 FAM9AQ8IZU1 332 aaPredicted RBP28.82■■■□□ 2.2
ARHGEF28-204ENST00000437974 PELP1Q8IZL8 1130 aaKnown RBP28.56■■■□□ 2.16
ARHGEF28-204ENST00000437974 TTBK1Q5TCY1 1321 aaPredicted RBP28.19■■■□□ 2.1
ARHGEF28-204ENST00000437974 RANGAP1P46060 587 aaPredicted RBP28.09■■■□□ 2.09
ARHGEF28-204ENST00000437974 PCGF6Q9BYE7 350 aa28.09■■■□□ 2.09
ARHGEF28-204ENST00000437974 ATP1B4Q9UN42 357 aaPredicted RBP28■■■□□ 2.07
ARHGEF28-204ENST00000437974 TRIM41Q8WV44 630 aa27.85■■■□□ 2.05
ARHGEF28-204ENST00000437974 UBTFP17480 764 aaKnown RBP27.68■■■□□ 2.02
ARHGEF28-204ENST00000437974 CCER1Q8TC90 406 aaPredicted RBP27.53■■■□□ 2
ARHGEF28-204ENST00000437974 ZEB1P37275 1124 aaPredicted RBP27.51■■□□□ 1.99
ARHGEF28-204ENST00000437974 CENPBP07199 599 aaPredicted RBP27.44■■□□□ 1.98
ARHGEF28-204ENST00000437974 ERICH6Q7L0X2 663 aa27.35■■□□□ 1.97
ARHGEF28-204ENST00000437974 MYT1LQ9UL68 1186 aa27.18■■□□□ 1.94
ARHGEF28-204ENST00000437974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.09■■□□□ 1.93
ARHGEF28-204ENST00000437974 HNRNPUL2Q1KMD3 747 aaKnown RBP27.09■■□□□ 1.93
ARHGEF28-204ENST00000437974 PPARGC1BQ86YN6 1023 aaKnown RBP27.07■■□□□ 1.92
ARHGEF28-204ENST00000437974 NEFLP07196 543 aa27.05■■□□□ 1.92
ARHGEF28-204ENST00000437974 YTHDC1Q96MU7 727 aaKnown RBP27.03■■□□□ 1.92
ARHGEF28-204ENST00000437974 TRIM26Q12899 539 aaPredicted RBP26.85■■□□□ 1.89
ARHGEF28-204ENST00000437974 ITGAEP38570 1179 aa26.8■■□□□ 1.88
ARHGEF28-204ENST00000437974 POLR3GLQ9BT43 218 aa26.73■■□□□ 1.87
ARHGEF28-204ENST00000437974 HRCP23327 699 aa26.65■■□□□ 1.86
ARHGEF28-204ENST00000437974 LOC105371045A0A1W2PR82 267 aa26.64■■□□□ 1.86
ARHGEF28-204ENST00000437974 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
ARHGEF28-204ENST00000437974 SLC4A1APQ9BWU0 796 aaKnown RBP26.42■■□□□ 1.82
ARHGEF28-204ENST00000437974 DAXXQ9UER7 740 aaPredicted RBP26.39■■□□□ 1.82
ARHGEF28-204ENST00000437974 CNGB1Q14028 1251 aaPredicted RBP26.36■■□□□ 1.81
ARHGEF28-204ENST00000437974 MYT1Q01538 1121 aa26.3■■□□□ 1.8
ARHGEF28-204ENST00000437974 PABPN1Q86U42 306 aaKnown RBP eCLIP26.27■■□□□ 1.8
ARHGEF28-204ENST00000437974 ABCC9O60706 1549 aa26.2■■□□□ 1.79
ARHGEF28-204ENST00000437974 FAM50AQ14320 339 aaKnown RBP26.14■■□□□ 1.78
ARHGEF28-204ENST00000437974 TRIM52Q96A61 297 aa26.08■■□□□ 1.77
ARHGEF28-204ENST00000437974 FBLN2P98095 1184 aa26.02■■□□□ 1.76
ARHGEF28-204ENST00000437974 DIEXFQ68CQ4 756 aaKnown RBP25.96■■□□□ 1.75
ARHGEF28-204ENST00000437974 CLSPNQ9HAW4 1339 aa25.9■■□□□ 1.74
ARHGEF28-204ENST00000437974 NEUROD1Q13562 356 aa25.8■■□□□ 1.72
ARHGEF28-204ENST00000437974 ZNF326Q5BKZ1 582 aaKnown RBP25.76■■□□□ 1.71
ARHGEF28-204ENST00000437974 ZNF316A6NFI3 1004 aaPredicted RBP25.72■■□□□ 1.71
ARHGEF28-204ENST00000437974 BCANQ96GW7 911 aa25.69■■□□□ 1.7
ARHGEF28-204ENST00000437974 ZBTB47Q9UFB7 747 aaPredicted RBP25.59■■□□□ 1.69
ARHGEF28-204ENST00000437974 SLC24A1O60721 1099 aa25.56■■□□□ 1.68
ARHGEF28-204ENST00000437974 ARID3CA6NKF2 412 aa25.54■■□□□ 1.68
ARHGEF28-204ENST00000437974 P3H3Q8IVL6 736 aa25.51■■□□□ 1.67
ARHGEF28-204ENST00000437974 RTL5Q5HYW3 569 aaPredicted RBP25.5■■□□□ 1.67
ARHGEF28-204ENST00000437974 ANP32CO43423 234 aa25.48■■□□□ 1.67
ARHGEF28-204ENST00000437974 NEFMP07197 916 aa25.48■■□□□ 1.67
ARHGEF28-204ENST00000437974 GTF3C3Q9Y5Q9 886 aa25.48■■□□□ 1.67
ARHGEF28-204ENST00000437974 ESF1Q9H501 851 aaKnown RBP25.46■■□□□ 1.67
ARHGEF28-204ENST00000437974 ZNF777Q9ULD5 760 aaPredicted RBP25.44■■□□□ 1.66
ARHGEF28-204ENST00000437974 CDK11AQ9UQ88 783 aaPredicted RBP25.41■■□□□ 1.66
ARHGEF28-204ENST00000437974 CANXP27824 592 aaKnown RBP25.36■■□□□ 1.65
ARHGEF28-204ENST00000437974 CSRNP3Q8WYN3 585 aa25.29■■□□□ 1.64
ARHGEF28-204ENST00000437974 NPM1P06748 294 aaKnown RBP eCLIP25.29■■□□□ 1.64
ARHGEF28-204ENST00000437974 BCL11AQ9H165 835 aa25.27■■□□□ 1.64
ARHGEF28-204ENST00000437974 STAG3Q9UJ98 1225 aa25.25■■□□□ 1.63
ARHGEF28-204ENST00000437974 CHGAP10645 457 aaKnown RBP25.18■■□□□ 1.62
ARHGEF28-204ENST00000437974 PLPPR3Q6T4P5 718 aa25.18■■□□□ 1.62
ARHGEF28-204ENST00000437974 ACIN1Q9UKV3 1341 aaKnown RBP25.09■■□□□ 1.61
ARHGEF28-204ENST00000437974 SCRIBQ14160 1630 aa25.04■■□□□ 1.6
ARHGEF28-204ENST00000437974 TONSLQ96HA7 1378 aa24.9■■□□□ 1.58
ARHGEF28-204ENST00000437974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.87■■□□□ 1.571e-6■■□□□ 13.1
ARHGEF28-204ENST00000437974 DCAF1Q9Y4B6 1507 aa24.85■■□□□ 1.57
ARHGEF28-204ENST00000437974 ZCCHC6Q5VYS8 1495 aaKnown RBP24.81■■□□□ 1.56
ARHGEF28-204ENST00000437974 CHMP7Q8WUX9 453 aaPredicted RBP24.81■■□□□ 1.56
ARHGEF28-204ENST00000437974 TSPY4P0CV99 314 aa24.79■■□□□ 1.56
ARHGEF28-204ENST00000437974 TSPY10P0CW01 314 aa24.79■■□□□ 1.56
ARHGEF28-204ENST00000437974 CHIC2Q9UKJ5 165 aa24.77■■□□□ 1.56
ARHGEF28-204ENST00000437974 FKBP8Q14318 412 aa24.73■■□□□ 1.55
ARHGEF28-204ENST00000437974 ANP32AP39687 249 aaKnown RBP24.72■■□□□ 1.55
ARHGEF28-204ENST00000437974 SCAF1Q9H7N4 1312 aaKnown RBP24.7■■□□□ 1.54
ARHGEF28-204ENST00000437974 NPM2Q86SE8 214 aaKnown RBP24.68■■□□□ 1.54
ARHGEF28-204ENST00000437974 DDX10Q13206 875 aaKnown RBP24.66■■□□□ 1.54
ARHGEF28-204ENST00000437974 HSP90AA1P07900 732 aaKnown RBP24.63■■□□□ 1.53
ARHGEF28-204ENST00000437974 MTUS2Q5JR59 1369 aa24.62■■□□□ 1.53
ARHGEF28-204ENST00000437974 HNRNPUQ00839 825 aaKnown RBP eCLIP24.61■■□□□ 1.53
ARHGEF28-204ENST00000437974 FAM9BQ8IZU0 186 aa24.6■■□□□ 1.53
ARHGEF28-204ENST00000437974 KDM2AQ9Y2K7 1162 aa24.6■■□□□ 1.53
ARHGEF28-204ENST00000437974 UPF2Q9HAU5 1272 aaKnown RBP24.58■■□□□ 1.53
ARHGEF28-204ENST00000437974 SALL2Q9Y467 1007 aaPredicted RBP24.57■■□□□ 1.52
ARHGEF28-204ENST00000437974 A0A0G2JS52 829 aa24.56■■□□□ 1.52
ARHGEF28-204ENST00000437974 WDR43Q15061 677 aaKnown RBP eCLIP24.56■■□□□ 1.52
ARHGEF28-204ENST00000437974 TMC1Q8TDI8 760 aa24.56■■□□□ 1.52
ARHGEF28-204ENST00000437974 PPP1R15AO75807 674 aaPredicted RBP24.53■■□□□ 1.52
ARHGEF28-204ENST00000437974 KCNH8Q96L42 1107 aa24.53■■□□□ 1.52
ARHGEF28-204ENST00000437974 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.5■■□□□ 1.51
ARHGEF28-204ENST00000437974 ANP32BQ92688 251 aaKnown RBP24.49■■□□□ 1.51
ARHGEF28-204ENST00000437974 ZBTB7CA1YPR0 619 aa24.47■■□□□ 1.51
ARHGEF28-204ENST00000437974 C14orf37Q86TY3 774 aa24.47■■□□□ 1.51
ARHGEF28-204ENST00000437974 PLEKHD1A6NEE1 506 aa24.45■■□□□ 1.5
ARHGEF28-204ENST00000437974 PLEKHG5O94827 1062 aa24.42■■□□□ 1.5
ARHGEF28-204ENST00000437974 MYO15BQ96JP2 1530 aa24.41■■□□□ 1.5
ARHGEF28-204ENST00000437974 SENP3Q9H4L4 574 aaPredicted RBP24.41■■□□□ 1.5
ARHGEF28-204ENST00000437974 ARID4BQ4LE39 1312 aaPredicted RBP24.4■■□□□ 1.5
ARHGEF28-204ENST00000437974 MIER1Q8N108 512 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms