RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 DCAF8L2P0C7V8 631 aa32.99■■■□□ 2.87
SYNM-204ENST00000594047 EHMT2Q96KQ7 1210 aa30.67■■■□□ 2.5
SYNM-204ENST00000594047 SUPT5HO00267 1087 aaKnown RBP30.43■■■□□ 2.46
SYNM-204ENST00000594047 SHROOM4Q9ULL8 1493 aa30.03■■■□□ 2.4
SYNM-204ENST00000594047 TTBK1Q5TCY1 1321 aaPredicted RBP29.43■■■□□ 2.3
SYNM-204ENST00000594047 RANGAP1P46060 587 aaPredicted RBP29.23■■■□□ 2.27
SYNM-204ENST00000594047 FAM9AQ8IZU1 332 aaPredicted RBP29.08■■■□□ 2.25
SYNM-204ENST00000594047 APLP2Q06481 763 aa28.97■■■□□ 2.23
SYNM-204ENST00000594047 ATP1B4Q9UN42 357 aaPredicted RBP28.86■■■□□ 2.21
SYNM-204ENST00000594047 NISCHQ9Y2I1 1504 aa28.59■■■□□ 2.17
SYNM-204ENST00000594047 PCGF6Q9BYE7 350 aa28.25■■■□□ 2.11
SYNM-204ENST00000594047 PELP1Q8IZL8 1130 aaKnown RBP28.23■■■□□ 2.11
SYNM-204ENST00000594047 MYT1LQ9UL68 1186 aa28.04■■■□□ 2.08
SYNM-204ENST00000594047 CHIC1Q5VXU3 224 aa28.03■■■□□ 2.08
SYNM-204ENST00000594047 UBTFP17480 764 aaKnown RBP27.88■■■□□ 2.05
SYNM-204ENST00000594047 PPARGC1BQ86YN6 1023 aaKnown RBP27.86■■■□□ 2.05
SYNM-204ENST00000594047 TRIM41Q8WV44 630 aa27.77■■■□□ 2.04
SYNM-204ENST00000594047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.71■■■□□ 2.03
SYNM-204ENST00000594047 HNRNPUL2Q1KMD3 747 aaKnown RBP27.71■■■□□ 2.03
SYNM-204ENST00000594047 ERICH6Q7L0X2 663 aa27.7■■■□□ 2.02
SYNM-204ENST00000594047 CCER1Q8TC90 406 aaPredicted RBP27.68■■■□□ 2.02
SYNM-204ENST00000594047 CNGB1Q14028 1251 aaPredicted RBP27.63■■■□□ 2.01
SYNM-204ENST00000594047 POLR3GLQ9BT43 218 aa27.61■■■□□ 2.01
SYNM-204ENST00000594047 YTHDC1Q96MU7 727 aaKnown RBP27.57■■■□□ 2
SYNM-204ENST00000594047 ITGAEP38570 1179 aa27.51■■□□□ 1.99
SYNM-204ENST00000594047 SLC4A1APQ9BWU0 796 aaKnown RBP27.32■■□□□ 1.96
SYNM-204ENST00000594047 CENPBP07199 599 aaPredicted RBP27.06■■□□□ 1.92
SYNM-204ENST00000594047 NEFLP07196 543 aa27.03■■□□□ 1.92
SYNM-204ENST00000594047 MYT1Q01538 1121 aa26.84■■□□□ 1.89
SYNM-204ENST00000594047 PABPN1Q86U42 306 aaKnown RBP eCLIP26.71■■□□□ 1.87
SYNM-204ENST00000594047 FBLN2P98095 1184 aa26.69■■□□□ 1.86
SYNM-204ENST00000594047 PLPPR3Q6T4P5 718 aa26.66■■□□□ 1.86
SYNM-204ENST00000594047 ZEB1P37275 1124 aaPredicted RBP26.65■■□□□ 1.86
SYNM-204ENST00000594047 DAXXQ9UER7 740 aaPredicted RBP26.6■■□□□ 1.85
SYNM-204ENST00000594047 BCL11AQ9H165 835 aa26.59■■□□□ 1.85
SYNM-204ENST00000594047 SLC24A1O60721 1099 aa26.58■■□□□ 1.85
SYNM-204ENST00000594047 LOC105371045A0A1W2PR82 267 aa26.53■■□□□ 1.84
SYNM-204ENST00000594047 BCANQ96GW7 911 aa26.5■■□□□ 1.83
SYNM-204ENST00000594047 ARID3CA6NKF2 412 aa26.47■■□□□ 1.83
SYNM-204ENST00000594047 FAM50AQ14320 339 aaKnown RBP26.47■■□□□ 1.83
SYNM-204ENST00000594047 TRIM52Q96A61 297 aa26.41■■□□□ 1.82
SYNM-204ENST00000594047 ZNF326Q5BKZ1 582 aaKnown RBP26.38■■□□□ 1.81
SYNM-204ENST00000594047 CLSPNQ9HAW4 1339 aa26.31■■□□□ 1.8
SYNM-204ENST00000594047 ABCC9O60706 1549 aa26.28■■□□□ 1.8
SYNM-204ENST00000594047 NEUROD1Q13562 356 aa26.26■■□□□ 1.79
SYNM-204ENST00000594047 TRIM26Q12899 539 aaPredicted RBP26.12■■□□□ 1.77
SYNM-204ENST00000594047 P3H3Q8IVL6 736 aa26.07■■□□□ 1.76
SYNM-204ENST00000594047 ZNF316A6NFI3 1004 aaPredicted RBP25.99■■□□□ 1.75
SYNM-204ENST00000594047 ZNF777Q9ULD5 760 aaPredicted RBP25.93■■□□□ 1.74
SYNM-204ENST00000594047 HRCP23327 699 aa25.89■■□□□ 1.73
SYNM-204ENST00000594047 SENP3Q9H4L4 574 aaPredicted RBP25.89■■□□□ 1.73
SYNM-204ENST00000594047 PLEKHG5O94827 1062 aa25.85■■□□□ 1.73
SYNM-204ENST00000594047 ESF1Q9H501 851 aaKnown RBP25.78■■□□□ 1.72
SYNM-204ENST00000594047 CHGAP10645 457 aaKnown RBP25.78■■□□□ 1.72
SYNM-204ENST00000594047 ZBTB47Q9UFB7 747 aaPredicted RBP25.76■■□□□ 1.71
SYNM-204ENST00000594047 SCAF1Q9H7N4 1312 aaKnown RBP25.74■■□□□ 1.71
SYNM-204ENST00000594047 A0A0G2JS52 829 aa25.72■■□□□ 1.71
SYNM-204ENST00000594047 CANXP27824 592 aaKnown RBP25.7■■□□□ 1.7
SYNM-204ENST00000594047 STAG3Q9UJ98 1225 aa25.69■■□□□ 1.7
SYNM-204ENST00000594047 NEFMP07197 916 aa25.52■■□□□ 1.68
SYNM-204ENST00000594047 DIEXFQ68CQ4 756 aaKnown RBP25.51■■□□□ 1.67
SYNM-204ENST00000594047 RTL5Q5HYW3 569 aaPredicted RBP25.51■■□□□ 1.67
SYNM-204ENST00000594047 ZBTB7CA1YPR0 619 aa25.48■■□□□ 1.67
SYNM-204ENST00000594047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.39■■□□□ 1.66
SYNM-204ENST00000594047 ANP32CO43423 234 aa25.38■■□□□ 1.65
SYNM-204ENST00000594047 NPM1P06748 294 aaKnown RBP eCLIP25.37■■□□□ 1.65
SYNM-204ENST00000594047 SALL2Q9Y467 1007 aaPredicted RBP25.31■■□□□ 1.64
SYNM-204ENST00000594047 NPM2Q86SE8 214 aaKnown RBP25.22■■□□□ 1.63
SYNM-204ENST00000594047 C14orf37Q86TY3 774 aa25.21■■□□□ 1.63
SYNM-204ENST00000594047 CHIC2Q9UKJ5 165 aa25.17■■□□□ 1.62
SYNM-204ENST00000594047 KDM2AQ9Y2K7 1162 aa25.05■■□□□ 1.6
SYNM-204ENST00000594047 CDK11AQ9UQ88 783 aaPredicted RBP25.02■■□□□ 1.6
SYNM-204ENST00000594047 KCNH8Q96L42 1107 aa25.02■■□□□ 1.6
SYNM-204ENST00000594047 ARID4BQ4LE39 1312 aaPredicted RBP25.02■■□□□ 1.6
SYNM-204ENST00000594047 ARXQ96QS3 562 aa24.99■■□□□ 1.59
SYNM-204ENST00000594047 HAP1P54257 671 aaPredicted RBP24.95■■□□□ 1.59
SYNM-204ENST00000594047 FAM9BQ8IZU0 186 aa24.92■■□□□ 1.58
SYNM-204ENST00000594047 GTF3C3Q9Y5Q9 886 aa24.91■■□□□ 1.58
SYNM-204ENST00000594047 SENP3-EIF4A1A0A087X0R7 540 aa24.89■■□□□ 1.57
SYNM-204ENST00000594047 HSP90AA1P07900 732 aaKnown RBP24.87■■□□□ 1.57
SYNM-204ENST00000594047 CHMP7Q8WUX9 453 aaPredicted RBP24.87■■□□□ 1.57
SYNM-204ENST00000594047 TULP1O00294 542 aaPredicted RBP24.86■■□□□ 1.57
SYNM-204ENST00000594047 PPP1R15AO75807 674 aaPredicted RBP24.85■■□□□ 1.57
SYNM-204ENST00000594047 TRHP20396 242 aaPredicted RBP24.81■■□□□ 1.56
SYNM-204ENST00000594047 SCRIBQ14160 1630 aa24.81■■□□□ 1.56
SYNM-204ENST00000594047 CSRNP3Q8WYN3 585 aa24.79■■□□□ 1.56
SYNM-204ENST00000594047 LMOD2Q6P5Q4 547 aa24.78■■□□□ 1.56
SYNM-204ENST00000594047 HIRIP3Q9BW71 556 aaPredicted RBP24.77■■□□□ 1.56
SYNM-204ENST00000594047 TONSLQ96HA7 1378 aa24.7■■□□□ 1.54
SYNM-204ENST00000594047 TAOK2Q9UL54 1235 aa24.68■■□□□ 1.54
SYNM-204ENST00000594047 DDX10Q13206 875 aaKnown RBP24.68■■□□□ 1.54
SYNM-204ENST00000594047 TMC1Q8TDI8 760 aa24.66■■□□□ 1.54
SYNM-204ENST00000594047 PPM1GO15355 546 aaPredicted RBP24.66■■□□□ 1.54
SYNM-204ENST00000594047 HNRNPUQ00839 825 aaKnown RBP eCLIP24.64■■□□□ 1.54
SYNM-204ENST00000594047 ANP32AP39687 249 aaKnown RBP24.62■■□□□ 1.53
SYNM-204ENST00000594047 RGL3Q3MIN7 710 aa24.62■■□□□ 1.53
SYNM-204ENST00000594047 TPRNQ4KMQ1 711 aa24.61■■□□□ 1.53
SYNM-204ENST00000594047 TSPY4P0CV99 314 aa24.6■■□□□ 1.53
SYNM-204ENST00000594047 TSPY10P0CW01 314 aa24.6■■□□□ 1.53
SYNM-204ENST00000594047 WDR43Q15061 677 aaKnown RBP eCLIP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms