RNA–Protein interactions for RNA: ENST00000548815.2

NBL1-209, Transcript of NBL1, DAN family BMP antagonist, humanhuman

APPRIS P3 TSL 3 BASIC

Gene NBL1, Length 1,953 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBL1-209ENST00000548815 NISCHQ9Y2I1 1504 aa42.17■■■■■ 4.34
NBL1-209ENST00000548815 CCDC180Q9P1Z9 1646 aa36.19■■■■□ 3.38
NBL1-209ENST00000548815 ZCCHC6Q5VYS8 1495 aaKnown RBP35.6■■■■□ 3.29
NBL1-209ENST00000548815 SHROOM4Q9ULL8 1493 aa35.51■■■■□ 3.27
NBL1-209ENST00000548815 DCAF8L2P0C7V8 631 aa34.94■■■■□ 3.18
NBL1-209ENST00000548815 DCAF1Q9Y4B6 1507 aa34.66■■■■□ 3.14
NBL1-209ENST00000548815 SUPT5HO00267 1087 aaKnown RBP34.6■■■■□ 3.13
NBL1-209ENST00000548815 MYO15BQ96JP2 1530 aa33.83■■■■□ 3.01
NBL1-209ENST00000548815 SCRIBQ14160 1630 aa33.74■■■□□ 2.99
NBL1-209ENST00000548815 ABCC9O60706 1549 aa33.73■■■□□ 2.99
NBL1-209ENST00000548815 NACADO15069 1562 aa33.51■■■□□ 2.95
NBL1-209ENST00000548815 CHIC1Q5VXU3 224 aa33.45■■■□□ 2.94
NBL1-209ENST00000548815 RSF1Q96T23 1441 aaPredicted RBP33.15■■■□□ 2.9
NBL1-209ENST00000548815 RB1CC1Q8TDY2 1594 aa33.06■■■□□ 2.88
NBL1-209ENST00000548815 CECR2Q9BXF3 1484 aa32.86■■■□□ 2.85
NBL1-209ENST00000548815 MROH2BQ7Z745 1585 aa32.74■■■□□ 2.83
NBL1-209ENST00000548815 UNC13AQ9UPW8 1703 aa32.57■■■□□ 2.8
NBL1-209ENST00000548815 WIZO95785 1651 aa32.57■■■□□ 2.8
NBL1-209ENST00000548815 BAZ1AQ9NRL2 1556 aaPredicted RBP32.46■■■□□ 2.79
NBL1-209ENST00000548815 LOC105371045A0A1W2PR82 267 aa32.39■■■□□ 2.78
NBL1-209ENST00000548815 TRIM41Q8WV44 630 aa32.31■■■□□ 2.76
NBL1-209ENST00000548815 SMARCA4P51532 1647 aa32.25■■■□□ 2.75
NBL1-209ENST00000548815 BICRAQ9NZM4 1560 aa32.12■■■□□ 2.73
NBL1-209ENST00000548815 PABPN1Q86U42 306 aaKnown RBP eCLIP32.1■■■□□ 2.73
NBL1-209ENST00000548815 TOP2AP11388 1531 aaKnown RBP32.09■■■□□ 2.73
NBL1-209ENST00000548815 FAM9AQ8IZU1 332 aaPredicted RBP31.98■■■□□ 2.71
NBL1-209ENST00000548815 EIF4G1Q04637 1599 aaKnown RBP31.97■■■□□ 2.71
NBL1-209ENST00000548815 PCGF6Q9BYE7 350 aa31.92■■■□□ 2.7
NBL1-209ENST00000548815 SMARCA2P51531 1590 aa31.88■■■□□ 2.69
NBL1-209ENST00000548815 CCDC88BA6NC98 1476 aa31.87■■■□□ 2.69
NBL1-209ENST00000548815 EHMT2Q96KQ7 1210 aa31.68■■■□□ 2.66
NBL1-209ENST00000548815 PEG3Q9GZU2 1588 aa31.65■■■□□ 2.66
NBL1-209ENST00000548815 HRCP23327 699 aa31.65■■■□□ 2.66
NBL1-209ENST00000548815 ABCC8Q09428 1581 aa31.65■■■□□ 2.66
NBL1-209ENST00000548815 TRIM26Q12899 539 aaPredicted RBP31.48■■■□□ 2.63
NBL1-209ENST00000548815 ATAD2BQ9ULI0 1458 aa31.48■■■□□ 2.63
NBL1-209ENST00000548815 BAZ1BQ9UIG0 1483 aaKnown RBP31.39■■■□□ 2.62
NBL1-209ENST00000548815 SOGA1O94964 1423 aa31.22■■■□□ 2.59
NBL1-209ENST00000548815 WRNQ14191 1432 aaPredicted RBP eCLIP31.18■■■□□ 2.58
NBL1-209ENST00000548815 RUSC2Q8N2Y8 1516 aa31.09■■■□□ 2.57
NBL1-209ENST00000548815 EEA1Q15075 1411 aa31.09■■■□□ 2.57
NBL1-209ENST00000548815 SYNJ1O43426 1573 aa31.07■■■□□ 2.56
NBL1-209ENST00000548815 PPARGC1BQ86YN6 1023 aaKnown RBP31.01■■■□□ 2.56
NBL1-209ENST00000548815 CSRNP3Q8WYN3 585 aa31.01■■■□□ 2.56
NBL1-209ENST00000548815 HMGXB3Q12766 1538 aa30.96■■■□□ 2.55
NBL1-209ENST00000548815 NCAPD3P42695 1498 aa30.94■■■□□ 2.54
NBL1-209ENST00000548815 CEP162Q5TB80 1403 aa30.9■■■□□ 2.54
NBL1-209ENST00000548815 TNIKQ9UKE5 1360 aa30.9■■■□□ 2.54
NBL1-209ENST00000548815 GOLGA3Q08378 1498 aa30.84■■■□□ 2.53
NBL1-209ENST00000548815 UBTFP17480 764 aaKnown RBP30.84■■■□□ 2.53
NBL1-209ENST00000548815 TOP2BQ02880 1626 aa30.75■■■□□ 2.51
NBL1-209ENST00000548815 KIF21BO75037 1637 aa30.71■■■□□ 2.51
NBL1-209ENST00000548815 CEP164Q9UPV0 1460 aa30.71■■■□□ 2.51
NBL1-209ENST00000548815 BIVM-ERCC5R4GMW8 1640 aa30.69■■■□□ 2.5
NBL1-209ENST00000548815 ZEB1P37275 1124 aaPredicted RBP30.63■■■□□ 2.49
NBL1-209ENST00000548815 CFTRP13569 1480 aa30.57■■■□□ 2.48
NBL1-209ENST00000548815 TTBK1Q5TCY1 1321 aaPredicted RBP30.56■■■□□ 2.48
NBL1-209ENST00000548815 CUX1P39880 1505 aa30.53■■■□□ 2.48
NBL1-209ENST00000548815 RAPGEF2Q9Y4G8 1499 aa30.51■■■□□ 2.47
NBL1-209ENST00000548815 PRDM2Q13029 1718 aa30.46■■■□□ 2.47
NBL1-209ENST00000548815 CC2D2AQ9P2K1 1620 aa30.44■■■□□ 2.46
NBL1-209ENST00000548815 CLIP1P30622 1438 aa30.43■■■□□ 2.46
NBL1-209ENST00000548815 CADPSQ9ULU8 1353 aa30.3■■■□□ 2.44
NBL1-209ENST00000548815 RANGAP1P46060 587 aaPredicted RBP30.3■■■□□ 2.44
NBL1-209ENST00000548815 ERICH3Q5RHP9 1530 aa30.29■■■□□ 2.44
NBL1-209ENST00000548815 PRXQ9BXM0 1461 aa30.28■■■□□ 2.44
NBL1-209ENST00000548815 KIF27Q86VH2 1401 aa30.27■■■□□ 2.44
NBL1-209ENST00000548815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.27■■■□□ 2.44
NBL1-209ENST00000548815 VPS8Q8N3P4 1428 aa30.26■■■□□ 2.43
NBL1-209ENST00000548815 CCER1Q8TC90 406 aaPredicted RBP30.21■■■□□ 2.43
NBL1-209ENST00000548815 APLP2Q06481 763 aa30.09■■■□□ 2.41
NBL1-209ENST00000548815 CUX2O14529 1486 aa30.07■■■□□ 2.4
NBL1-209ENST00000548815 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
NBL1-209ENST00000548815 FANCD2Q9BXW9 1451 aa30.03■■■□□ 2.4
NBL1-209ENST00000548815 ARAP1Q96P48 1450 aa30.02■■■□□ 2.4
NBL1-209ENST00000548815 IGF1RP08069 1367 aa29.93■■■□□ 2.38
NBL1-209ENST00000548815 NESP48681 1621 aa29.92■■■□□ 2.38
NBL1-209ENST00000548815 DNMBPQ6XZF7 1577 aa29.87■■■□□ 2.37
NBL1-209ENST00000548815 HNRNPUL2Q1KMD3 747 aaKnown RBP29.86■■■□□ 2.37
NBL1-209ENST00000548815 CARMIL1Q5VZK9 1371 aa29.82■■■□□ 2.36
NBL1-209ENST00000548815 ARHGAP35Q9NRY4 1499 aa29.82■■■□□ 2.36
NBL1-209ENST00000548815 TOPBP1Q92547 1522 aa29.8■■■□□ 2.36
NBL1-209ENST00000548815 RAD54L2Q9Y4B4 1467 aa29.77■■■□□ 2.36
NBL1-209ENST00000548815 LAMC3Q9Y6N6 1575 aa29.75■■■□□ 2.35
NBL1-209ENST00000548815 POLA1P09884 1462 aaPredicted RBP29.74■■■□□ 2.35
NBL1-209ENST00000548815 KANK4Q5T7N3 995 aaPredicted RBP29.7■■■□□ 2.35
NBL1-209ENST00000548815 ABCA10Q8WWZ4 1543 aa29.7■■■□□ 2.34
NBL1-209ENST00000548815 URB2Q14146 1524 aaKnown RBP29.62■■■□□ 2.33
NBL1-209ENST00000548815 DNAJC5BQ9UF47 199 aa29.6■■■□□ 2.33
NBL1-209ENST00000548815 WDR97A6NE52 1622 aa29.54■■■□□ 2.32
NBL1-209ENST00000548815 PDS5BQ9NTI5 1447 aa29.53■■■□□ 2.32
NBL1-209ENST00000548815 CUL7Q14999 1698 aa29.53■■■□□ 2.32
NBL1-209ENST00000548815 KIF21AQ7Z4S6 1674 aa29.49■■■□□ 2.31
NBL1-209ENST00000548815 RRBP1Q9P2E9 1410 aaKnown RBP29.48■■■□□ 2.31
NBL1-209ENST00000548815 TIAM1Q13009 1591 aa29.46■■■□□ 2.31
NBL1-209ENST00000548815 P3H3Q8IVL6 736 aa29.44■■■□□ 2.3
NBL1-209ENST00000548815 CTTNBP2Q8WZ74 1663 aa29.43■■■□□ 2.3
NBL1-209ENST00000548815 MAP3K1Q13233 1512 aa29.41■■■□□ 2.3
NBL1-209ENST00000548815 ABCA5Q8WWZ7 1642 aa29.4■■■□□ 2.3
NBL1-209ENST00000548815 FHAD1B1AJZ9 1412 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms