RNA–Protein interactions for RNA: ENST00000577427.1

SCO1-203, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3 BASIC

Gene SCO1, Length 1,601 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-203ENST00000577427 NISCHQ9Y2I1 1504 aa43.08■■■■■ 4.49
SCO1-203ENST00000577427 CCDC180Q9P1Z9 1646 aa37.44■■■■□ 3.58
SCO1-203ENST00000577427 ZCCHC6Q5VYS8 1495 aaKnown RBP36.34■■■■□ 3.41
SCO1-203ENST00000577427 DCAF1Q9Y4B6 1507 aa35.67■■■■□ 3.3
SCO1-203ENST00000577427 SHROOM4Q9ULL8 1493 aa35.47■■■■□ 3.27
SCO1-203ENST00000577427 DCAF8L2P0C7V8 631 aa35.24■■■■□ 3.23
SCO1-203ENST00000577427 MYO15BQ96JP2 1530 aa35.02■■■■□ 3.2
SCO1-203ENST00000577427 ABCC9O60706 1549 aa34.7■■■■□ 3.14
SCO1-203ENST00000577427 NACADO15069 1562 aa34.64■■■■□ 3.14
SCO1-203ENST00000577427 SCRIBQ14160 1630 aa34.43■■■■□ 3.1
SCO1-203ENST00000577427 SUPT5HO00267 1087 aaKnown RBP34.4■■■■□ 3.1
SCO1-203ENST00000577427 RB1CC1Q8TDY2 1594 aa34.22■■■■□ 3.07
SCO1-203ENST00000577427 UNC13AQ9UPW8 1703 aa33.65■■■□□ 2.98
SCO1-203ENST00000577427 RSF1Q96T23 1441 aaPredicted RBP33.59■■■□□ 2.97
SCO1-203ENST00000577427 CECR2Q9BXF3 1484 aa33.37■■■□□ 2.93
SCO1-203ENST00000577427 MROH2BQ7Z745 1585 aa33.29■■■□□ 2.92
SCO1-203ENST00000577427 BAZ1AQ9NRL2 1556 aaPredicted RBP33.26■■■□□ 2.92
SCO1-203ENST00000577427 CHIC1Q5VXU3 224 aa33.24■■■□□ 2.91
SCO1-203ENST00000577427 BICRAQ9NZM4 1560 aa33.14■■■□□ 2.9
SCO1-203ENST00000577427 WIZO95785 1651 aa33.12■■■□□ 2.89
SCO1-203ENST00000577427 SMARCA4P51532 1647 aa33.06■■■□□ 2.88
SCO1-203ENST00000577427 TOP2AP11388 1531 aaKnown RBP32.79■■■□□ 2.84
SCO1-203ENST00000577427 PABPN1Q86U42 306 aaKnown RBP eCLIP32.74■■■□□ 2.83
SCO1-203ENST00000577427 PEG3Q9GZU2 1588 aa32.62■■■□□ 2.81
SCO1-203ENST00000577427 EIF4G1Q04637 1599 aaKnown RBP32.51■■■□□ 2.8
SCO1-203ENST00000577427 SMARCA2P51531 1590 aa32.5■■■□□ 2.79
SCO1-203ENST00000577427 CCDC88BA6NC98 1476 aa32.39■■■□□ 2.77
SCO1-203ENST00000577427 TRIM41Q8WV44 630 aa32.33■■■□□ 2.77
SCO1-203ENST00000577427 ATAD2BQ9ULI0 1458 aa32.28■■■□□ 2.76
SCO1-203ENST00000577427 BAZ1BQ9UIG0 1483 aaKnown RBP32.18■■■□□ 2.74
SCO1-203ENST00000577427 HMGXB3Q12766 1538 aa31.99■■■□□ 2.71
SCO1-203ENST00000577427 LOC105371045A0A1W2PR82 267 aa31.95■■■□□ 2.71
SCO1-203ENST00000577427 ABCC8Q09428 1581 aa31.94■■■□□ 2.7
SCO1-203ENST00000577427 NCAPD3P42695 1498 aa31.89■■■□□ 2.7
SCO1-203ENST00000577427 FAM9AQ8IZU1 332 aaPredicted RBP31.71■■■□□ 2.67
SCO1-203ENST00000577427 WRNQ14191 1432 aaPredicted RBP eCLIP31.64■■■□□ 2.66
SCO1-203ENST00000577427 EEA1Q15075 1411 aa31.56■■■□□ 2.64
SCO1-203ENST00000577427 SYNJ1O43426 1573 aa31.54■■■□□ 2.64
SCO1-203ENST00000577427 PRDM2Q13029 1718 aa31.48■■■□□ 2.63
SCO1-203ENST00000577427 CC2D2AQ9P2K1 1620 aa31.48■■■□□ 2.63
SCO1-203ENST00000577427 BIVM-ERCC5R4GMW8 1640 aa31.4■■■□□ 2.62
SCO1-203ENST00000577427 TOP2BQ02880 1626 aa31.39■■■□□ 2.62
SCO1-203ENST00000577427 SOGA1O94964 1423 aa31.39■■■□□ 2.62
SCO1-203ENST00000577427 CFTRP13569 1480 aa31.36■■■□□ 2.61
SCO1-203ENST00000577427 RUSC2Q8N2Y8 1516 aa31.24■■■□□ 2.59
SCO1-203ENST00000577427 EHMT2Q96KQ7 1210 aa31.22■■■□□ 2.59
SCO1-203ENST00000577427 CSRNP3Q8WYN3 585 aa31.2■■■□□ 2.59
SCO1-203ENST00000577427 KIF21BO75037 1637 aa31.17■■■□□ 2.58
SCO1-203ENST00000577427 PCGF6Q9BYE7 350 aa31.16■■■□□ 2.58
SCO1-203ENST00000577427 GOLGA3Q08378 1498 aa31.14■■■□□ 2.58
SCO1-203ENST00000577427 CUX1P39880 1505 aa31.11■■■□□ 2.57
SCO1-203ENST00000577427 TNIKQ9UKE5 1360 aa31.1■■■□□ 2.57
SCO1-203ENST00000577427 CADPSQ9ULU8 1353 aa31.1■■■□□ 2.57
SCO1-203ENST00000577427 CEP164Q9UPV0 1460 aa31.08■■■□□ 2.57
SCO1-203ENST00000577427 TRIM26Q12899 539 aaPredicted RBP31.06■■■□□ 2.56
SCO1-203ENST00000577427 CEP162Q5TB80 1403 aa30.99■■■□□ 2.55
SCO1-203ENST00000577427 UBTFP17480 764 aaKnown RBP30.86■■■□□ 2.53
SCO1-203ENST00000577427 ERICH3Q5RHP9 1530 aa30.83■■■□□ 2.53
SCO1-203ENST00000577427 LAMC3Q9Y6N6 1575 aa30.81■■■□□ 2.52
SCO1-203ENST00000577427 FANCD2Q9BXW9 1451 aa30.81■■■□□ 2.52
SCO1-203ENST00000577427 KIF27Q86VH2 1401 aa30.8■■■□□ 2.52
SCO1-203ENST00000577427 HRCP23327 699 aa30.8■■■□□ 2.52
SCO1-203ENST00000577427 RAPGEF2Q9Y4G8 1499 aa30.76■■■□□ 2.51
SCO1-203ENST00000577427 PRXQ9BXM0 1461 aa30.72■■■□□ 2.51
SCO1-203ENST00000577427 DNMBPQ6XZF7 1577 aa30.71■■■□□ 2.51
SCO1-203ENST00000577427 FGD5Q6ZNL6 1462 aa30.68■■■□□ 2.5
SCO1-203ENST00000577427 NESP48681 1621 aa30.64■■■□□ 2.5
SCO1-203ENST00000577427 CLIP1P30622 1438 aa30.62■■■□□ 2.49
SCO1-203ENST00000577427 CUX2O14529 1486 aa30.57■■■□□ 2.49
SCO1-203ENST00000577427 TOPBP1Q92547 1522 aa30.55■■■□□ 2.48
SCO1-203ENST00000577427 PDS5BQ9NTI5 1447 aa30.47■■■□□ 2.47
SCO1-203ENST00000577427 VPS8Q8N3P4 1428 aa30.45■■■□□ 2.47
SCO1-203ENST00000577427 POLA1P09884 1462 aaPredicted RBP30.43■■■□□ 2.46
SCO1-203ENST00000577427 KIF21AQ7Z4S6 1674 aa30.43■■■□□ 2.46
SCO1-203ENST00000577427 ABCA10Q8WWZ4 1543 aa30.42■■■□□ 2.46
SCO1-203ENST00000577427 WDR97A6NE52 1622 aa30.4■■■□□ 2.46
SCO1-203ENST00000577427 PPARGC1BQ86YN6 1023 aaKnown RBP30.4■■■□□ 2.46
SCO1-203ENST00000577427 URB2Q14146 1524 aaKnown RBP30.39■■■□□ 2.45
SCO1-203ENST00000577427 IGF1RP08069 1367 aa30.38■■■□□ 2.45
SCO1-203ENST00000577427 CUL7Q14999 1698 aa30.31■■■□□ 2.44
SCO1-203ENST00000577427 RAD54L2Q9Y4B4 1467 aa30.3■■■□□ 2.44
SCO1-203ENST00000577427 CARMIL1Q5VZK9 1371 aa30.27■■■□□ 2.44
SCO1-203ENST00000577427 DNAJC5BQ9UF47 199 aa30.26■■■□□ 2.44
SCO1-203ENST00000577427 ARAP1Q96P48 1450 aa30.26■■■□□ 2.44
SCO1-203ENST00000577427 ABCA5Q8WWZ7 1642 aa30.2■■■□□ 2.42
SCO1-203ENST00000577427 ZEB1P37275 1124 aaPredicted RBP30.19■■■□□ 2.42
SCO1-203ENST00000577427 RANGAP1P46060 587 aaPredicted RBP30.14■■■□□ 2.41
SCO1-203ENST00000577427 APLP2Q06481 763 aa30.14■■■□□ 2.41
SCO1-203ENST00000577427 ARHGAP35Q9NRY4 1499 aa30.13■■■□□ 2.41
SCO1-203ENST00000577427 CTTNBP2Q8WZ74 1663 aa30.11■■■□□ 2.41
SCO1-203ENST00000577427 MRC2Q9UBG0 1479 aa30.09■■■□□ 2.41
SCO1-203ENST00000577427 TARBP1Q13395 1621 aaKnown RBP30.09■■■□□ 2.41
SCO1-203ENST00000577427 TTBK1Q5TCY1 1321 aaPredicted RBP30.07■■■□□ 2.4
SCO1-203ENST00000577427 GAPVD1Q14C86 1478 aa30.02■■■□□ 2.4
SCO1-203ENST00000577427 PBRM1Q86U86 1689 aa29.97■■■□□ 2.39
SCO1-203ENST00000577427 EFCAB5A4FU69 1503 aa29.95■■■□□ 2.39
SCO1-203ENST00000577427 WDR62O43379 1518 aa29.93■■■□□ 2.38
SCO1-203ENST00000577427 TDRD9Q8NDG6 1382 aaKnown RBP29.91■■■□□ 2.38
SCO1-203ENST00000577427 MAP3K1Q13233 1512 aa29.87■■■□□ 2.37
SCO1-203ENST00000577427 FHAD1B1AJZ9 1412 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms