RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 NISCHQ9Y2I1 1504 aa47.42■■■■■ 5.18
HOXA6-201ENST00000222728 CCDC180Q9P1Z9 1646 aa42.03■■■■■ 4.32
HOXA6-201ENST00000222728 ABCC9O60706 1549 aa40.75■■■■■ 4.11
HOXA6-201ENST00000222728 ZCCHC6Q5VYS8 1495 aaKnown RBP39.59■■■■□ 3.93
HOXA6-201ENST00000222728 DCAF8L2P0C7V8 631 aa39.5■■■■□ 3.91
HOXA6-201ENST00000222728 NACADO15069 1562 aa39.35■■■■□ 3.89
HOXA6-201ENST00000222728 RB1CC1Q8TDY2 1594 aa39.33■■■■□ 3.89
HOXA6-201ENST00000222728 DCAF1Q9Y4B6 1507 aa39.19■■■■□ 3.86
HOXA6-201ENST00000222728 MYO15BQ96JP2 1530 aa39.16■■■■□ 3.86
HOXA6-201ENST00000222728 UNC13AQ9UPW8 1703 aa38.66■■■■□ 3.78
HOXA6-201ENST00000222728 SCRIBQ14160 1630 aa38.45■■■■□ 3.75
HOXA6-201ENST00000222728 BICRAQ9NZM4 1560 aa38.18■■■■□ 3.7
HOXA6-201ENST00000222728 PABPN1Q86U42 306 aaKnown RBP eCLIP38.13■■■■□ 3.69
HOXA6-201ENST00000222728 SHROOM4Q9ULL8 1493 aa37.82■■■■□ 3.64
HOXA6-201ENST00000222728 EIF4G1Q04637 1599 aaKnown RBP37.11■■■■□ 3.53
HOXA6-201ENST00000222728 DNAJC5BQ9UF47 199 aa37■■■■□ 3.51
HOXA6-201ENST00000222728 CECR2Q9BXF3 1484 aa36.94■■■■□ 3.5
HOXA6-201ENST00000222728 CC2D2AQ9P2K1 1620 aa36.89■■■■□ 3.5
HOXA6-201ENST00000222728 SMARCA4P51532 1647 aa36.77■■■■□ 3.48
HOXA6-201ENST00000222728 BAZ1AQ9NRL2 1556 aaPredicted RBP36.72■■■■□ 3.47
HOXA6-201ENST00000222728 MROH2BQ7Z745 1585 aa36.61■■■■□ 3.45
HOXA6-201ENST00000222728 ATAD2BQ9ULI0 1458 aa36.39■■■■□ 3.42
HOXA6-201ENST00000222728 SMARCA2P51531 1590 aa36.37■■■■□ 3.41
HOXA6-201ENST00000222728 PEG3Q9GZU2 1588 aa36.32■■■■□ 3.41
HOXA6-201ENST00000222728 WIZO95785 1651 aa36.32■■■■□ 3.4
HOXA6-201ENST00000222728 RSF1Q96T23 1441 aaPredicted RBP36.27■■■■□ 3.4
HOXA6-201ENST00000222728 NCAPD3P42695 1498 aa36.26■■■■□ 3.4
HOXA6-201ENST00000222728 HMGXB3Q12766 1538 aa36.17■■■■□ 3.38
HOXA6-201ENST00000222728 BAZ1BQ9UIG0 1483 aaKnown RBP36.14■■■■□ 3.38
HOXA6-201ENST00000222728 TOP2AP11388 1531 aaKnown RBP35.84■■■■□ 3.33
HOXA6-201ENST00000222728 SUPT5HO00267 1087 aaKnown RBP35.74■■■■□ 3.31
HOXA6-201ENST00000222728 CCDC88BA6NC98 1476 aa35.42■■■■□ 3.26
HOXA6-201ENST00000222728 NESP48681 1621 aa35.41■■■■□ 3.26
HOXA6-201ENST00000222728 LAMC3Q9Y6N6 1575 aa35.3■■■■□ 3.24
HOXA6-201ENST00000222728 CADPSQ9ULU8 1353 aa35.24■■■■□ 3.23
HOXA6-201ENST00000222728 CFTRP13569 1480 aa35.13■■■■□ 3.21
HOXA6-201ENST00000222728 PRDM2Q13029 1718 aa35.12■■■■□ 3.21
HOXA6-201ENST00000222728 KIF21AQ7Z4S6 1674 aa35.09■■■■□ 3.21
HOXA6-201ENST00000222728 ERCC6Q03468 1493 aa35.06■■■■□ 3.2
HOXA6-201ENST00000222728 PDS5BQ9NTI5 1447 aa34.99■■■■□ 3.19
HOXA6-201ENST00000222728 FANCD2Q9BXW9 1451 aa34.89■■■■□ 3.18
HOXA6-201ENST00000222728 CEP164Q9UPV0 1460 aa34.8■■■■□ 3.16
HOXA6-201ENST00000222728 THOC2Q8NI27 1593 aaKnown RBP34.78■■■■□ 3.16
HOXA6-201ENST00000222728 MRC2Q9UBG0 1479 aa34.66■■■■□ 3.14
HOXA6-201ENST00000222728 WDR62O43379 1518 aa34.55■■■■□ 3.12
HOXA6-201ENST00000222728 URB2Q14146 1524 aaKnown RBP34.55■■■■□ 3.12
HOXA6-201ENST00000222728 CUX2O14529 1486 aa34.47■■■■□ 3.11
HOXA6-201ENST00000222728 DNMBPQ6XZF7 1577 aa34.4■■■■□ 3.1
HOXA6-201ENST00000222728 TOPBP1Q92547 1522 aa34.4■■■■□ 3.1
HOXA6-201ENST00000222728 ABCC8Q09428 1581 aa34.35■■■■□ 3.09
HOXA6-201ENST00000222728 CUX1P39880 1505 aa34.31■■■■□ 3.08
HOXA6-201ENST00000222728 WRNQ14191 1432 aaPredicted RBP eCLIP34.19■■■■□ 3.06
HOXA6-201ENST00000222728 SYNJ1O43426 1573 aa34.19■■■■□ 3.06
HOXA6-201ENST00000222728 BIVM-ERCC5R4GMW8 1640 aa34.15■■■■□ 3.06
HOXA6-201ENST00000222728 POLA1P09884 1462 aaPredicted RBP34.13■■■■□ 3.05
HOXA6-201ENST00000222728 TOP2BQ02880 1626 aa34.12■■■■□ 3.05
HOXA6-201ENST00000222728 FGD5Q6ZNL6 1462 aa34.12■■■■□ 3.05
HOXA6-201ENST00000222728 IFT140Q96RY7 1462 aa34.02■■■■□ 3.04
HOXA6-201ENST00000222728 TARBP1Q13395 1621 aaKnown RBP34.02■■■■□ 3.04
HOXA6-201ENST00000222728 RAD54L2Q9Y4B4 1467 aa34.01■■■■□ 3.03
HOXA6-201ENST00000222728 SOGA1O94964 1423 aa33.96■■■■□ 3.03
HOXA6-201ENST00000222728 ZNF608Q9ULD9 1512 aaPredicted RBP33.92■■■■□ 3.02
HOXA6-201ENST00000222728 WDR97A6NE52 1622 aa33.9■■■■□ 3.02
HOXA6-201ENST00000222728 EIF4G3O43432 1585 aaKnown RBP33.84■■■■□ 3.01
HOXA6-201ENST00000222728 ABCA10Q8WWZ4 1543 aa33.76■■■■□ 3
HOXA6-201ENST00000222728 AQRO60306 1485 aaKnown RBP eCLIP33.76■■■□□ 2.99
HOXA6-201ENST00000222728 TDRD9Q8NDG6 1382 aaKnown RBP33.75■■■□□ 2.99
HOXA6-201ENST00000222728 TRIM41Q8WV44 630 aa33.66■■■□□ 2.98
HOXA6-201ENST00000222728 ABCA5Q8WWZ7 1642 aa33.66■■■□□ 2.98
HOXA6-201ENST00000222728 PBRM1Q86U86 1689 aa33.65■■■□□ 2.98
HOXA6-201ENST00000222728 GAPVD1Q14C86 1478 aa33.59■■■□□ 2.97
HOXA6-201ENST00000222728 CHIC1Q5VXU3 224 aa33.55■■■□□ 2.96
HOXA6-201ENST00000222728 GRIN2BQ13224 1484 aa33.5■■■□□ 2.95
HOXA6-201ENST00000222728 SNAPC4Q5SXM2 1469 aa33.46■■■□□ 2.95
HOXA6-201ENST00000222728 CHD1O14646 1710 aa33.42■■■□□ 2.94
HOXA6-201ENST00000222728 KIF27Q86VH2 1401 aa33.42■■■□□ 2.94
HOXA6-201ENST00000222728 MAGI1Q96QZ7 1491 aaPredicted RBP33.37■■■□□ 2.93
HOXA6-201ENST00000222728 ERICH3Q5RHP9 1530 aa33.37■■■□□ 2.93
HOXA6-201ENST00000222728 RUSC2Q8N2Y8 1516 aa33.36■■■□□ 2.93
HOXA6-201ENST00000222728 ADAMTS12P58397 1594 aa33.31■■■□□ 2.92
HOXA6-201ENST00000222728 FBLN2P98095 1184 aa33.27■■■□□ 2.92
HOXA6-201ENST00000222728 SYNJ2O15056 1496 aa33.25■■■□□ 2.91
HOXA6-201ENST00000222728 IGF1RP08069 1367 aa33.23■■■□□ 2.91
HOXA6-201ENST00000222728 CUL7Q14999 1698 aa33.21■■■□□ 2.91
HOXA6-201ENST00000222728 CHMP7Q8WUX9 453 aaPredicted RBP33.19■■■□□ 2.9
HOXA6-201ENST00000222728 FHAD1B1AJZ9 1412 aa33.19■■■□□ 2.9
HOXA6-201ENST00000222728 OSCARQ8IYS5 282 aa33.11■■■□□ 2.89
HOXA6-201ENST00000222728 GRIN2AQ12879 1464 aa33.11■■■□□ 2.89
HOXA6-201ENST00000222728 CARMIL1Q5VZK9 1371 aa33.06■■■□□ 2.88
HOXA6-201ENST00000222728 FAM9AQ8IZU1 332 aaPredicted RBP33.05■■■□□ 2.88
HOXA6-201ENST00000222728 EEA1Q15075 1411 aa33.01■■■□□ 2.87
HOXA6-201ENST00000222728 CEP170Q5SW79 1584 aa32.99■■■□□ 2.87
HOXA6-201ENST00000222728 CSRNP3Q8WYN3 585 aa32.95■■■□□ 2.87
HOXA6-201ENST00000222728 DNAJC5Q9H3Z4 198 aa32.93■■■□□ 2.86
HOXA6-201ENST00000222728 CLASP1Q7Z460 1538 aa32.92■■■□□ 2.86
HOXA6-201ENST00000222728 RAPGEF2Q9Y4G8 1499 aa32.92■■■□□ 2.86
HOXA6-201ENST00000222728 NUP160Q12769 1436 aa32.91■■■□□ 2.86
HOXA6-201ENST00000222728 PRXQ9BXM0 1461 aa32.89■■■□□ 2.86
HOXA6-201ENST00000222728 KIF21BO75037 1637 aa32.76■■■□□ 2.83
HOXA6-201ENST00000222728 CTTNBP2Q8WZ74 1663 aa32.75■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms