RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 NISCHQ9Y2I1 1504 aa45.62■■■■■ 4.89
HIGD1A-204ENST00000452906 CCDC180Q9P1Z9 1646 aa40.96■■■■■ 4.15
HIGD1A-204ENST00000452906 ABCC9O60706 1549 aa40.52■■■■■ 4.08
HIGD1A-204ENST00000452906 RB1CC1Q8TDY2 1594 aa38.81■■■■□ 3.8
HIGD1A-204ENST00000452906 NACADO15069 1562 aa38.61■■■■□ 3.77
HIGD1A-204ENST00000452906 DCAF8L2P0C7V8 631 aa38.21■■■■□ 3.71
HIGD1A-204ENST00000452906 MYO15BQ96JP2 1530 aa38.21■■■■□ 3.71
HIGD1A-204ENST00000452906 UNC13AQ9UPW8 1703 aa37.97■■■■□ 3.67
HIGD1A-204ENST00000452906 ZCCHC6Q5VYS8 1495 aaKnown RBP37.87■■■■□ 3.65
HIGD1A-204ENST00000452906 DCAF1Q9Y4B6 1507 aa37.78■■■■□ 3.64
HIGD1A-204ENST00000452906 DNAJC5BQ9UF47 199 aa37.7■■■■□ 3.63
HIGD1A-204ENST00000452906 PABPN1Q86U42 306 aaKnown RBP eCLIP37.67■■■■□ 3.62
HIGD1A-204ENST00000452906 BICRAQ9NZM4 1560 aa37.61■■■■□ 3.61
HIGD1A-204ENST00000452906 SHROOM4Q9ULL8 1493 aa37.27■■■■□ 3.56
HIGD1A-204ENST00000452906 SCRIBQ14160 1630 aa37.19■■■■□ 3.54
HIGD1A-204ENST00000452906 CC2D2AQ9P2K1 1620 aa36.69■■■■□ 3.46
HIGD1A-204ENST00000452906 EIF4G1Q04637 1599 aaKnown RBP36.69■■■■□ 3.46
HIGD1A-204ENST00000452906 CECR2Q9BXF3 1484 aa36.51■■■■□ 3.44
HIGD1A-204ENST00000452906 NCAPD3P42695 1498 aa35.59■■■■□ 3.29
HIGD1A-204ENST00000452906 SMARCA4P51532 1647 aa35.56■■■■□ 3.28
HIGD1A-204ENST00000452906 ATAD2BQ9ULI0 1458 aa35.48■■■■□ 3.27
HIGD1A-204ENST00000452906 SMARCA2P51531 1590 aa35.47■■■■□ 3.27
HIGD1A-204ENST00000452906 BAZ1AQ9NRL2 1556 aaPredicted RBP35.43■■■■□ 3.26
HIGD1A-204ENST00000452906 HMGXB3Q12766 1538 aa35.41■■■■□ 3.26
HIGD1A-204ENST00000452906 PEG3Q9GZU2 1588 aa35.26■■■■□ 3.24
HIGD1A-204ENST00000452906 BAZ1BQ9UIG0 1483 aaKnown RBP35.17■■■■□ 3.22
HIGD1A-204ENST00000452906 MROH2BQ7Z745 1585 aa35.1■■■■□ 3.21
HIGD1A-204ENST00000452906 ERCC6Q03468 1493 aa35.01■■■■□ 3.19
HIGD1A-204ENST00000452906 CUX2O14529 1486 aa34.94■■■■□ 3.18
HIGD1A-204ENST00000452906 NESP48681 1621 aa34.86■■■■□ 3.17
HIGD1A-204ENST00000452906 LAMC3Q9Y6N6 1575 aa34.8■■■■□ 3.16
HIGD1A-204ENST00000452906 WIZO95785 1651 aa34.72■■■■□ 3.15
HIGD1A-204ENST00000452906 SUPT5HO00267 1087 aaKnown RBP34.58■■■■□ 3.13
HIGD1A-204ENST00000452906 THOC2Q8NI27 1593 aaKnown RBP34.57■■■■□ 3.13
HIGD1A-204ENST00000452906 DNAJC5Q9H3Z4 198 aa34.54■■■■□ 3.12
HIGD1A-204ENST00000452906 PDS5BQ9NTI5 1447 aa34.54■■■■□ 3.12
HIGD1A-204ENST00000452906 KIF21AQ7Z4S6 1674 aa34.54■■■■□ 3.12
HIGD1A-204ENST00000452906 RSF1Q96T23 1441 aaPredicted RBP34.51■■■■□ 3.12
HIGD1A-204ENST00000452906 CADPSQ9ULU8 1353 aa34.49■■■■□ 3.11
HIGD1A-204ENST00000452906 TOP2AP11388 1531 aaKnown RBP34.35■■■■□ 3.09
HIGD1A-204ENST00000452906 MRC2Q9UBG0 1479 aa34.23■■■■□ 3.07
HIGD1A-204ENST00000452906 WDR62O43379 1518 aa34.17■■■■□ 3.06
HIGD1A-204ENST00000452906 CFTRP13569 1480 aa34.17■■■■□ 3.06
HIGD1A-204ENST00000452906 CEP164Q9UPV0 1460 aa34.14■■■■□ 3.06
HIGD1A-204ENST00000452906 FANCD2Q9BXW9 1451 aa34.1■■■■□ 3.05
HIGD1A-204ENST00000452906 PRDM2Q13029 1718 aa34.01■■■■□ 3.04
HIGD1A-204ENST00000452906 CCDC88BA6NC98 1476 aa33.88■■■■□ 3.01
HIGD1A-204ENST00000452906 URB2Q14146 1524 aaKnown RBP33.79■■■■□ 3
HIGD1A-204ENST00000452906 ABCC8Q09428 1581 aa33.51■■■□□ 2.96
HIGD1A-204ENST00000452906 TOPBP1Q92547 1522 aa33.49■■■□□ 2.95
HIGD1A-204ENST00000452906 IFT140Q96RY7 1462 aa33.46■■■□□ 2.95
HIGD1A-204ENST00000452906 DNMBPQ6XZF7 1577 aa33.43■■■□□ 2.94
HIGD1A-204ENST00000452906 ZNF608Q9ULD9 1512 aaPredicted RBP33.3■■■□□ 2.92
HIGD1A-204ENST00000452906 OSCARQ8IYS5 282 aa33.29■■■□□ 2.92
HIGD1A-204ENST00000452906 EIF4G3O43432 1585 aaKnown RBP33.22■■■□□ 2.91
HIGD1A-204ENST00000452906 TARBP1Q13395 1621 aaKnown RBP33.21■■■□□ 2.91
HIGD1A-204ENST00000452906 POLA1P09884 1462 aaPredicted RBP33.15■■■□□ 2.9
HIGD1A-204ENST00000452906 CHIC1Q5VXU3 224 aa33.06■■■□□ 2.88
HIGD1A-204ENST00000452906 TRIM41Q8WV44 630 aa33.03■■■□□ 2.88
HIGD1A-204ENST00000452906 AQRO60306 1485 aaKnown RBP eCLIP33.02■■■□□ 2.883e-7■■■□□ 16.1
HIGD1A-204ENST00000452906 WDR97A6NE52 1622 aa33■■■□□ 2.87
HIGD1A-204ENST00000452906 CUX1P39880 1505 aa32.98■■■□□ 2.87
HIGD1A-204ENST00000452906 SOGA1O94964 1423 aa32.98■■■□□ 2.87
HIGD1A-204ENST00000452906 FGD5Q6ZNL6 1462 aa32.98■■■□□ 2.87
HIGD1A-204ENST00000452906 RAD54L2Q9Y4B4 1467 aa32.96■■■□□ 2.87
HIGD1A-204ENST00000452906 CHD1O14646 1710 aa32.96■■■□□ 2.87
HIGD1A-204ENST00000452906 RIMBP3CA6NJZ7 1639 aa32.88■■■□□ 2.85
HIGD1A-204ENST00000452906 RIMBP3BA6NNM3 1639 aa32.88■■■□□ 2.85
HIGD1A-204ENST00000452906 RIMBP3Q9UFD9 1639 aa32.88■■■□□ 2.85
HIGD1A-204ENST00000452906 TDRD9Q8NDG6 1382 aaKnown RBP32.83■■■□□ 2.85
HIGD1A-204ENST00000452906 ARHGEF11O15085 1522 aa32.79■■■□□ 2.84
HIGD1A-204ENST00000452906 SNAPC4Q5SXM2 1469 aa32.74■■■□□ 2.83
HIGD1A-204ENST00000452906 MAGI1Q96QZ7 1491 aaPredicted RBP32.74■■■□□ 2.83
HIGD1A-204ENST00000452906 GRIN2BQ13224 1484 aa32.72■■■□□ 2.83
HIGD1A-204ENST00000452906 FBLN2P98095 1184 aa32.7■■■□□ 2.83
HIGD1A-204ENST00000452906 PBRM1Q86U86 1689 aa32.67■■■□□ 2.82
HIGD1A-204ENST00000452906 ABCA10Q8WWZ4 1543 aa32.66■■■□□ 2.82
HIGD1A-204ENST00000452906 ABCA5Q8WWZ7 1642 aa32.62■■■□□ 2.81
HIGD1A-204ENST00000452906 GAPVD1Q14C86 1478 aa32.61■■■□□ 2.81
HIGD1A-204ENST00000452906 BIVM-ERCC5R4GMW8 1640 aa32.61■■■□□ 2.81
HIGD1A-204ENST00000452906 SYNJ2O15056 1496 aa32.6■■■□□ 2.81
HIGD1A-204ENST00000452906 TOP2BQ02880 1626 aa32.59■■■□□ 2.81
HIGD1A-204ENST00000452906 SYNJ1O43426 1573 aa32.58■■■□□ 2.81
HIGD1A-204ENST00000452906 CHMP7Q8WUX9 453 aaPredicted RBP32.56■■■□□ 2.8
HIGD1A-204ENST00000452906 WRNQ14191 1432 aaPredicted RBP eCLIP32.56■■■□□ 2.8
HIGD1A-204ENST00000452906 CLASP1Q7Z460 1538 aa32.56■■■□□ 2.8
HIGD1A-204ENST00000452906 ARAP1Q96P48 1450 aa32.46■■■□□ 2.79
HIGD1A-204ENST00000452906 CYB5RLQ6IPT4 315 aa32.43■■■□□ 2.78
HIGD1A-204ENST00000452906 ADAMTS12P58397 1594 aa32.34■■■□□ 2.77
HIGD1A-204ENST00000452906 GRIN2AQ12879 1464 aa32.29■■■□□ 2.76
HIGD1A-204ENST00000452906 ERICH3Q5RHP9 1530 aa32.28■■■□□ 2.76
HIGD1A-204ENST00000452906 FHAD1B1AJZ9 1412 aa32.23■■■□□ 2.75
HIGD1A-204ENST00000452906 NUP160Q12769 1436 aa32.18■■■□□ 2.74
HIGD1A-204ENST00000452906 EEA1Q15075 1411 aa32.17■■■□□ 2.74
HIGD1A-204ENST00000452906 CEP170Q5SW79 1584 aa32.16■■■□□ 2.74
HIGD1A-204ENST00000452906 SHROOM2Q13796 1616 aa32.07■■■□□ 2.72
HIGD1A-204ENST00000452906 TRHP20396 242 aaPredicted RBP31.99■■■□□ 2.71
HIGD1A-204ENST00000452906 ERCC6L2Q5T890 1561 aa31.98■■■□□ 2.71
HIGD1A-204ENST00000452906 KIF27Q86VH2 1401 aa31.92■■■□□ 2.7
HIGD1A-204ENST00000452906 CUL7Q14999 1698 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms