RNA–Protein interactions for RNA: ENST00000335459.9

TRABD2A-201, Transcript of TraB domain containing 2A, humanhuman

TSL 1 (best) BASIC

Gene TRABD2A, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2A-201ENST00000335459 NISCHQ9Y2I1 1504 aa46.56■■■■■ 5.04
TRABD2A-201ENST00000335459 CCDC180Q9P1Z9 1646 aa41.07■■■■■ 4.16
TRABD2A-201ENST00000335459 ABCC9O60706 1549 aa39.95■■■■□ 3.99
TRABD2A-201ENST00000335459 ZCCHC6Q5VYS8 1495 aaKnown RBP38.88■■■■□ 3.81
TRABD2A-201ENST00000335459 DCAF8L2P0C7V8 631 aa38.82■■■■□ 3.81
TRABD2A-201ENST00000335459 NACADO15069 1562 aa38.5■■■■□ 3.75
TRABD2A-201ENST00000335459 RB1CC1Q8TDY2 1594 aa38.45■■■■□ 3.75
TRABD2A-201ENST00000335459 DCAF1Q9Y4B6 1507 aa38.42■■■■□ 3.74
TRABD2A-201ENST00000335459 MYO15BQ96JP2 1530 aa38.37■■■■□ 3.73
TRABD2A-201ENST00000335459 UNC13AQ9UPW8 1703 aa37.78■■■■□ 3.64
TRABD2A-201ENST00000335459 SCRIBQ14160 1630 aa37.7■■■■□ 3.63
TRABD2A-201ENST00000335459 PABPN1Q86U42 306 aaKnown RBP eCLIP37.47■■■■□ 3.59
TRABD2A-201ENST00000335459 BICRAQ9NZM4 1560 aa37.44■■■■□ 3.58
TRABD2A-201ENST00000335459 SHROOM4Q9ULL8 1493 aa37.25■■■■□ 3.55
TRABD2A-201ENST00000335459 DNAJC5BQ9UF47 199 aa36.38■■■■□ 3.42
TRABD2A-201ENST00000335459 CECR2Q9BXF3 1484 aa36.35■■■■□ 3.41
TRABD2A-201ENST00000335459 EIF4G1Q04637 1599 aaKnown RBP36.35■■■■□ 3.41
TRABD2A-201ENST00000335459 CC2D2AQ9P2K1 1620 aa36.11■■■■□ 3.37
TRABD2A-201ENST00000335459 SMARCA4P51532 1647 aa36.04■■■■□ 3.36
TRABD2A-201ENST00000335459 BAZ1AQ9NRL2 1556 aaPredicted RBP35.99■■■■□ 3.35
TRABD2A-201ENST00000335459 MROH2BQ7Z745 1585 aa35.98■■■■□ 3.35
TRABD2A-201ENST00000335459 ATAD2BQ9ULI0 1458 aa35.73■■■■□ 3.31
TRABD2A-201ENST00000335459 RSF1Q96T23 1441 aaPredicted RBP35.7■■■■□ 3.31
TRABD2A-201ENST00000335459 WIZO95785 1651 aa35.64■■■■□ 3.3
TRABD2A-201ENST00000335459 PEG3Q9GZU2 1588 aa35.61■■■■□ 3.29
TRABD2A-201ENST00000335459 SMARCA2P51531 1590 aa35.6■■■■□ 3.29
TRABD2A-201ENST00000335459 NCAPD3P42695 1498 aa35.58■■■■□ 3.29
TRABD2A-201ENST00000335459 BAZ1BQ9UIG0 1483 aaKnown RBP35.42■■■■□ 3.26
TRABD2A-201ENST00000335459 HMGXB3Q12766 1538 aa35.41■■■■□ 3.26
TRABD2A-201ENST00000335459 SUPT5HO00267 1087 aaKnown RBP35.23■■■■□ 3.23
TRABD2A-201ENST00000335459 TOP2AP11388 1531 aaKnown RBP35.15■■■■□ 3.22
TRABD2A-201ENST00000335459 CCDC88BA6NC98 1476 aa34.82■■■■□ 3.16
TRABD2A-201ENST00000335459 NESP48681 1621 aa34.76■■■■□ 3.16
TRABD2A-201ENST00000335459 CADPSQ9ULU8 1353 aa34.59■■■■□ 3.13
TRABD2A-201ENST00000335459 LAMC3Q9Y6N6 1575 aa34.53■■■■□ 3.12
TRABD2A-201ENST00000335459 CFTRP13569 1480 aa34.49■■■■□ 3.11
TRABD2A-201ENST00000335459 KIF21AQ7Z4S6 1674 aa34.31■■■■□ 3.08
TRABD2A-201ENST00000335459 ERCC6Q03468 1493 aa34.28■■■■□ 3.08
TRABD2A-201ENST00000335459 PDS5BQ9NTI5 1447 aa34.26■■■■□ 3.08
TRABD2A-201ENST00000335459 PRDM2Q13029 1718 aa34.23■■■■□ 3.07
TRABD2A-201ENST00000335459 FANCD2Q9BXW9 1451 aa34.21■■■■□ 3.07
TRABD2A-201ENST00000335459 CEP164Q9UPV0 1460 aa34.08■■■■□ 3.05
TRABD2A-201ENST00000335459 THOC2Q8NI27 1593 aaKnown RBP34.03■■■■□ 3.04
TRABD2A-201ENST00000335459 MRC2Q9UBG0 1479 aa33.93■■■■□ 3.02
TRABD2A-201ENST00000335459 URB2Q14146 1524 aaKnown RBP33.9■■■■□ 3.02
TRABD2A-201ENST00000335459 WDR62O43379 1518 aa33.83■■■■□ 3.01
TRABD2A-201ENST00000335459 ABCC8Q09428 1581 aa33.78■■■■□ 3
TRABD2A-201ENST00000335459 TOPBP1Q92547 1522 aa33.73■■■□□ 2.99
TRABD2A-201ENST00000335459 CUX1P39880 1505 aa33.7■■■□□ 2.99
TRABD2A-201ENST00000335459 DNMBPQ6XZF7 1577 aa33.68■■■□□ 2.98
TRABD2A-201ENST00000335459 CUX2O14529 1486 aa33.67■■■□□ 2.98
TRABD2A-201ENST00000335459 WRNQ14191 1432 aaPredicted RBP eCLIP33.59■■■□□ 2.97
TRABD2A-201ENST00000335459 SYNJ1O43426 1573 aa33.58■■■□□ 2.97
TRABD2A-201ENST00000335459 POLA1P09884 1462 aaPredicted RBP33.5■■■□□ 2.95
TRABD2A-201ENST00000335459 FGD5Q6ZNL6 1462 aa33.49■■■□□ 2.95
TRABD2A-201ENST00000335459 TOP2BQ02880 1626 aa33.46■■■□□ 2.95
TRABD2A-201ENST00000335459 BIVM-ERCC5R4GMW8 1640 aa33.45■■■□□ 2.95
TRABD2A-201ENST00000335459 CHIC1Q5VXU3 224 aa33.45■■■□□ 2.95
TRABD2A-201ENST00000335459 RAD54L2Q9Y4B4 1467 aa33.42■■■□□ 2.94
TRABD2A-201ENST00000335459 TARBP1Q13395 1621 aaKnown RBP33.35■■■□□ 2.93
TRABD2A-201ENST00000335459 SOGA1O94964 1423 aa33.33■■■□□ 2.93
TRABD2A-201ENST00000335459 IFT140Q96RY7 1462 aa33.32■■■□□ 2.93
TRABD2A-201ENST00000335459 ZNF608Q9ULD9 1512 aaPredicted RBP33.31■■■□□ 2.92
TRABD2A-201ENST00000335459 TDRD9Q8NDG6 1382 aaKnown RBP33.17■■■□□ 2.9
TRABD2A-201ENST00000335459 WDR97A6NE52 1622 aa33.17■■■□□ 2.9
TRABD2A-201ENST00000335459 AQRO60306 1485 aaKnown RBP eCLIP33.17■■■□□ 2.9
TRABD2A-201ENST00000335459 TRIM41Q8WV44 630 aa33.14■■■□□ 2.9
TRABD2A-201ENST00000335459 ABCA10Q8WWZ4 1543 aa33.12■■■□□ 2.89
TRABD2A-201ENST00000335459 EIF4G3O43432 1585 aaKnown RBP33.12■■■□□ 2.89
TRABD2A-201ENST00000335459 ABCA5Q8WWZ7 1642 aa32.99■■■□□ 2.87
TRABD2A-201ENST00000335459 GAPVD1Q14C86 1478 aa32.95■■■□□ 2.87
TRABD2A-201ENST00000335459 RUSC2Q8N2Y8 1516 aa32.89■■■□□ 2.86
TRABD2A-201ENST00000335459 PBRM1Q86U86 1689 aa32.88■■■□□ 2.85
TRABD2A-201ENST00000335459 GRIN2BQ13224 1484 aa32.84■■■□□ 2.85
TRABD2A-201ENST00000335459 SNAPC4Q5SXM2 1469 aa32.81■■■□□ 2.84
TRABD2A-201ENST00000335459 KIF27Q86VH2 1401 aa32.8■■■□□ 2.84
TRABD2A-201ENST00000335459 IGF1RP08069 1367 aa32.71■■■□□ 2.83
TRABD2A-201ENST00000335459 ERICH3Q5RHP9 1530 aa32.69■■■□□ 2.82
TRABD2A-201ENST00000335459 MAGI1Q96QZ7 1491 aaPredicted RBP32.68■■■□□ 2.82
TRABD2A-201ENST00000335459 FBLN2P98095 1184 aa32.65■■■□□ 2.82
TRABD2A-201ENST00000335459 CHD1O14646 1710 aa32.64■■■□□ 2.82
TRABD2A-201ENST00000335459 ADAMTS12P58397 1594 aa32.63■■■□□ 2.81
TRABD2A-201ENST00000335459 FAM9AQ8IZU1 332 aaPredicted RBP32.6■■■□□ 2.81
TRABD2A-201ENST00000335459 SYNJ2O15056 1496 aa32.58■■■□□ 2.81
TRABD2A-201ENST00000335459 CHMP7Q8WUX9 453 aaPredicted RBP32.55■■■□□ 2.8
TRABD2A-201ENST00000335459 FHAD1B1AJZ9 1412 aa32.54■■■□□ 2.8
TRABD2A-201ENST00000335459 CARMIL1Q5VZK9 1371 aa32.48■■■□□ 2.79
TRABD2A-201ENST00000335459 CUL7Q14999 1698 aa32.48■■■□□ 2.79
TRABD2A-201ENST00000335459 GRIN2AQ12879 1464 aa32.46■■■□□ 2.79
TRABD2A-201ENST00000335459 HRCP23327 699 aa32.45■■■□□ 2.79
TRABD2A-201ENST00000335459 OSCARQ8IYS5 282 aa32.43■■■□□ 2.78
TRABD2A-201ENST00000335459 CSRNP3Q8WYN3 585 aa32.43■■■□□ 2.78
TRABD2A-201ENST00000335459 EEA1Q15075 1411 aa32.39■■■□□ 2.77
TRABD2A-201ENST00000335459 PRXQ9BXM0 1461 aa32.36■■■□□ 2.77
TRABD2A-201ENST00000335459 CEP170Q5SW79 1584 aa32.35■■■□□ 2.77
TRABD2A-201ENST00000335459 RAPGEF2Q9Y4G8 1499 aa32.31■■■□□ 2.76
TRABD2A-201ENST00000335459 NUP160Q12769 1436 aa32.29■■■□□ 2.76
TRABD2A-201ENST00000335459 LOC105371045A0A1W2PR82 267 aa32.28■■■□□ 2.76
TRABD2A-201ENST00000335459 CLASP1Q7Z460 1538 aa32.24■■■□□ 2.75
TRABD2A-201ENST00000335459 EHMT2Q96KQ7 1210 aa32.24■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms