RNA–Protein interactions for RNA: ENST00000621372.4

LSR-214, Transcript of lipolysis stimulated lipoprotein receptor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LSR, Length 2,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSR-214ENST00000621372 NISCHQ9Y2I1 1504 aa43.62■■■■■ 4.57
LSR-214ENST00000621372 CCDC180Q9P1Z9 1646 aa37.74■■■■□ 3.63
LSR-214ENST00000621372 ZCCHC6Q5VYS8 1495 aaKnown RBP36.68■■■■□ 3.46
LSR-214ENST00000621372 DCAF8L2P0C7V8 631 aa36.25■■■■□ 3.39
LSR-214ENST00000621372 SHROOM4Q9ULL8 1493 aa36.04■■■■□ 3.36
LSR-214ENST00000621372 DCAF1Q9Y4B6 1507 aa35.96■■■■□ 3.35
LSR-214ENST00000621372 ABCC9O60706 1549 aa35.71■■■■□ 3.31
LSR-214ENST00000621372 MYO15BQ96JP2 1530 aa35.41■■■■□ 3.26
LSR-214ENST00000621372 NACADO15069 1562 aa35.17■■■■□ 3.22
LSR-214ENST00000621372 SCRIBQ14160 1630 aa34.95■■■■□ 3.18
LSR-214ENST00000621372 SUPT5HO00267 1087 aaKnown RBP34.84■■■■□ 3.17
LSR-214ENST00000621372 RB1CC1Q8TDY2 1594 aa34.82■■■■□ 3.16
LSR-214ENST00000621372 UNC13AQ9UPW8 1703 aa34.08■■■■□ 3.05
LSR-214ENST00000621372 RSF1Q96T23 1441 aaPredicted RBP34.02■■■■□ 3.04
LSR-214ENST00000621372 CECR2Q9BXF3 1484 aa33.97■■■■□ 3.03
LSR-214ENST00000621372 PABPN1Q86U42 306 aaKnown RBP eCLIP33.85■■■■□ 3.01
LSR-214ENST00000621372 BICRAQ9NZM4 1560 aa33.79■■■■□ 3
LSR-214ENST00000621372 MROH2BQ7Z745 1585 aa33.76■■■■□ 3
LSR-214ENST00000621372 BAZ1AQ9NRL2 1556 aaPredicted RBP33.63■■■□□ 2.97
LSR-214ENST00000621372 WIZO95785 1651 aa33.48■■■□□ 2.95
LSR-214ENST00000621372 SMARCA4P51532 1647 aa33.44■■■□□ 2.94
LSR-214ENST00000621372 CHIC1Q5VXU3 224 aa33.41■■■□□ 2.94
LSR-214ENST00000621372 TOP2AP11388 1531 aaKnown RBP33.08■■■□□ 2.89
LSR-214ENST00000621372 PEG3Q9GZU2 1588 aa32.96■■■□□ 2.87
LSR-214ENST00000621372 ATAD2BQ9ULI0 1458 aa32.89■■■□□ 2.86
LSR-214ENST00000621372 CCDC88BA6NC98 1476 aa32.85■■■□□ 2.85
LSR-214ENST00000621372 SMARCA2P51531 1590 aa32.81■■■□□ 2.84
LSR-214ENST00000621372 EIF4G1Q04637 1599 aaKnown RBP32.77■■■□□ 2.84
LSR-214ENST00000621372 BAZ1BQ9UIG0 1483 aaKnown RBP32.72■■■□□ 2.83
LSR-214ENST00000621372 TRIM41Q8WV44 630 aa32.67■■■□□ 2.82
LSR-214ENST00000621372 NCAPD3P42695 1498 aa32.52■■■□□ 2.8
LSR-214ENST00000621372 HMGXB3Q12766 1538 aa32.43■■■□□ 2.78
LSR-214ENST00000621372 ABCC8Q09428 1581 aa32.27■■■□□ 2.76
LSR-214ENST00000621372 LOC105371045A0A1W2PR82 267 aa32.25■■■□□ 2.75
LSR-214ENST00000621372 CC2D2AQ9P2K1 1620 aa32.23■■■□□ 2.75
LSR-214ENST00000621372 FAM9AQ8IZU1 332 aaPredicted RBP32.18■■■□□ 2.74
LSR-214ENST00000621372 WRNQ14191 1432 aaPredicted RBP eCLIP32.01■■■□□ 2.72
LSR-214ENST00000621372 CFTRP13569 1480 aa31.9■■■□□ 2.7
LSR-214ENST00000621372 SYNJ1O43426 1573 aa31.82■■■□□ 2.68
LSR-214ENST00000621372 EHMT2Q96KQ7 1210 aa31.8■■■□□ 2.68
LSR-214ENST00000621372 CADPSQ9ULU8 1353 aa31.77■■■□□ 2.68
LSR-214ENST00000621372 SOGA1O94964 1423 aa31.77■■■□□ 2.68
LSR-214ENST00000621372 RUSC2Q8N2Y8 1516 aa31.63■■■□□ 2.65
LSR-214ENST00000621372 EEA1Q15075 1411 aa31.63■■■□□ 2.65
LSR-214ENST00000621372 TOP2BQ02880 1626 aa31.62■■■□□ 2.65
LSR-214ENST00000621372 CSRNP3Q8WYN3 585 aa31.58■■■□□ 2.65
LSR-214ENST00000621372 DNAJC5BQ9UF47 199 aa31.55■■■□□ 2.64
LSR-214ENST00000621372 PRDM2Q13029 1718 aa31.55■■■□□ 2.64
LSR-214ENST00000621372 BIVM-ERCC5R4GMW8 1640 aa31.54■■■□□ 2.64
LSR-214ENST00000621372 CUX1P39880 1505 aa31.53■■■□□ 2.64
LSR-214ENST00000621372 NESP48681 1621 aa31.44■■■□□ 2.62
LSR-214ENST00000621372 FANCD2Q9BXW9 1451 aa31.41■■■□□ 2.62
LSR-214ENST00000621372 LAMC3Q9Y6N6 1575 aa31.31■■■□□ 2.6
LSR-214ENST00000621372 UBTFP17480 764 aaKnown RBP31.27■■■□□ 2.6
LSR-214ENST00000621372 HRCP23327 699 aa31.25■■■□□ 2.59
LSR-214ENST00000621372 GOLGA3Q08378 1498 aa31.25■■■□□ 2.59
LSR-214ENST00000621372 TNIKQ9UKE5 1360 aa31.23■■■□□ 2.59
LSR-214ENST00000621372 CEP164Q9UPV0 1460 aa31.22■■■□□ 2.59
LSR-214ENST00000621372 KIF27Q86VH2 1401 aa31.17■■■□□ 2.58
LSR-214ENST00000621372 KIF21BO75037 1637 aa31.16■■■□□ 2.58
LSR-214ENST00000621372 FGD5Q6ZNL6 1462 aa31.16■■■□□ 2.58
LSR-214ENST00000621372 PDS5BQ9NTI5 1447 aa31.15■■■□□ 2.58
LSR-214ENST00000621372 CEP162Q5TB80 1403 aa31.11■■■□□ 2.57
LSR-214ENST00000621372 DNMBPQ6XZF7 1577 aa31.1■■■□□ 2.57
LSR-214ENST00000621372 TOPBP1Q92547 1522 aa31.08■■■□□ 2.57
LSR-214ENST00000621372 RAPGEF2Q9Y4G8 1499 aa31.07■■■□□ 2.56
LSR-214ENST00000621372 PCGF6Q9BYE7 350 aa31.07■■■□□ 2.56
LSR-214ENST00000621372 CUX2O14529 1486 aa31.05■■■□□ 2.56
LSR-214ENST00000621372 PRXQ9BXM0 1461 aa31■■■□□ 2.55
LSR-214ENST00000621372 URB2Q14146 1524 aaKnown RBP30.99■■■□□ 2.55
LSR-214ENST00000621372 POLA1P09884 1462 aaPredicted RBP30.97■■■□□ 2.55
LSR-214ENST00000621372 RAD54L2Q9Y4B4 1467 aa30.94■■■□□ 2.54
LSR-214ENST00000621372 KIF21AQ7Z4S6 1674 aa30.92■■■□□ 2.54
LSR-214ENST00000621372 ERICH3Q5RHP9 1530 aa30.91■■■□□ 2.54
LSR-214ENST00000621372 IGF1RP08069 1367 aa30.91■■■□□ 2.54
LSR-214ENST00000621372 TRIM26Q12899 539 aaPredicted RBP30.9■■■□□ 2.54
LSR-214ENST00000621372 ABCA10Q8WWZ4 1543 aa30.85■■■□□ 2.53
LSR-214ENST00000621372 CLIP1P30622 1438 aa30.81■■■□□ 2.52
LSR-214ENST00000621372 RANGAP1P46060 587 aaPredicted RBP30.78■■■□□ 2.52
LSR-214ENST00000621372 PPARGC1BQ86YN6 1023 aaKnown RBP30.77■■■□□ 2.52
LSR-214ENST00000621372 CARMIL1Q5VZK9 1371 aa30.75■■■□□ 2.51
LSR-214ENST00000621372 MRC2Q9UBG0 1479 aa30.71■■■□□ 2.51
LSR-214ENST00000621372 TDRD9Q8NDG6 1382 aaKnown RBP30.65■■■□□ 2.5
LSR-214ENST00000621372 WDR97A6NE52 1622 aa30.61■■■□□ 2.49
LSR-214ENST00000621372 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
LSR-214ENST00000621372 VPS8Q8N3P4 1428 aa30.55■■■□□ 2.48
LSR-214ENST00000621372 GAPVD1Q14C86 1478 aa30.54■■■□□ 2.48
LSR-214ENST00000621372 TARBP1Q13395 1621 aaKnown RBP30.53■■■□□ 2.48
LSR-214ENST00000621372 ABCA5Q8WWZ7 1642 aa30.52■■■□□ 2.48
LSR-214ENST00000621372 WDR62O43379 1518 aa30.49■■■□□ 2.47
LSR-214ENST00000621372 TTBK1Q5TCY1 1321 aaPredicted RBP30.49■■■□□ 2.47
LSR-214ENST00000621372 CUL7Q14999 1698 aa30.47■■■□□ 2.47
LSR-214ENST00000621372 ARAP1Q96P48 1450 aa30.44■■■□□ 2.46
LSR-214ENST00000621372 ARHGAP35Q9NRY4 1499 aa30.39■■■□□ 2.46
LSR-214ENST00000621372 AQRO60306 1485 aaKnown RBP eCLIP30.38■■■□□ 2.451e-6■■■□□ 18.9
LSR-214ENST00000621372 IFT140Q96RY7 1462 aa30.38■■■□□ 2.45
LSR-214ENST00000621372 APLP2Q06481 763 aa30.36■■■□□ 2.45
LSR-214ENST00000621372 THOC2Q8NI27 1593 aaKnown RBP30.32■■■□□ 2.44
LSR-214ENST00000621372 ZNF608Q9ULD9 1512 aaPredicted RBP30.29■■■□□ 2.44
LSR-214ENST00000621372 GRIN2BQ13224 1484 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms