RNA–Protein interactions for RNA: ENST00000181839.8

CDK13-201, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK13, Length 7,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-201ENST00000181839 DCAF8L2P0C7V8 631 aa31.76■■■□□ 2.68
CDK13-201ENST00000181839 EHMT2Q96KQ7 1210 aa29.71■■■□□ 2.35
CDK13-201ENST00000181839 SUPT5HO00267 1087 aaKnown RBP29.17■■■□□ 2.26
CDK13-201ENST00000181839 SHROOM4Q9ULL8 1493 aa28.59■■■□□ 2.17
CDK13-201ENST00000181839 TTBK1Q5TCY1 1321 aaPredicted RBP28.56■■■□□ 2.16
CDK13-201ENST00000181839 PELP1Q8IZL8 1130 aaKnown RBP28.47■■■□□ 2.15
CDK13-201ENST00000181839 APLP2Q06481 763 aa28.39■■■□□ 2.14
CDK13-201ENST00000181839 FAM9AQ8IZU1 332 aaPredicted RBP28.32■■■□□ 2.12
CDK13-201ENST00000181839 RANGAP1P46060 587 aaPredicted RBP28.3■■■□□ 2.12
CDK13-201ENST00000181839 ATP1B4Q9UN42 357 aaPredicted RBP28.15■■■□□ 2.1
CDK13-201ENST00000181839 ERICH6Q7L0X2 663 aa27.93■■■□□ 2.06
CDK13-201ENST00000181839 MYT1LQ9UL68 1186 aa27.52■■■□□ 2
CDK13-201ENST00000181839 PCGF6Q9BYE7 350 aa27.51■■□□□ 1.99
CDK13-201ENST00000181839 CHIC1Q5VXU3 224 aa27.49■■□□□ 1.99
CDK13-201ENST00000181839 CCER1Q8TC90 406 aaPredicted RBP27.31■■□□□ 1.96
CDK13-201ENST00000181839 MYT1Q01538 1121 aa27.19■■□□□ 1.94
CDK13-201ENST00000181839 POLR3GLQ9BT43 218 aa27.11■■□□□ 1.93
CDK13-201ENST00000181839 CNGB1Q14028 1251 aaPredicted RBP27.05■■□□□ 1.92
CDK13-201ENST00000181839 YTHDC1Q96MU7 727 aaKnown RBP27.05■■□□□ 1.92
CDK13-201ENST00000181839 SLC4A1APQ9BWU0 796 aaKnown RBP26.97■■□□□ 1.91
CDK13-201ENST00000181839 UBTFP17480 764 aaKnown RBP26.94■■□□□ 1.9
CDK13-201ENST00000181839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.94■■□□□ 1.9
CDK13-201ENST00000181839 HNRNPUL2Q1KMD3 747 aaKnown RBP26.94■■□□□ 1.9
CDK13-201ENST00000181839 NEFLP07196 543 aa26.88■■□□□ 1.89
CDK13-201ENST00000181839 PPARGC1BQ86YN6 1023 aaKnown RBP26.79■■□□□ 1.88
CDK13-201ENST00000181839 CENPBP07199 599 aaPredicted RBP26.79■■□□□ 1.88
CDK13-201ENST00000181839 DAXXQ9UER7 740 aaPredicted RBP26.71■■□□□ 1.87
CDK13-201ENST00000181839 ITGAEP38570 1179 aa26.66■■□□□ 1.86
CDK13-201ENST00000181839 TRIM41Q8WV44 630 aa26.66■■□□□ 1.86
CDK13-201ENST00000181839 NISCHQ9Y2I1 1504 aa26.41■■□□□ 1.82
CDK13-201ENST00000181839 SLC24A1O60721 1099 aa26.34■■□□□ 1.81
CDK13-201ENST00000181839 BCL11AQ9H165 835 aa26.28■■□□□ 1.8
CDK13-201ENST00000181839 CLSPNQ9HAW4 1339 aa26.18■■□□□ 1.78
CDK13-201ENST00000181839 ZEB1P37275 1124 aaPredicted RBP26.1■■□□□ 1.77
CDK13-201ENST00000181839 ZNF316A6NFI3 1004 aaPredicted RBP26.02■■□□□ 1.76
CDK13-201ENST00000181839 BCANQ96GW7 911 aa26.02■■□□□ 1.76
CDK13-201ENST00000181839 PLPPR3Q6T4P5 718 aa25.99■■□□□ 1.75
CDK13-201ENST00000181839 ZBTB47Q9UFB7 747 aaPredicted RBP25.68■■□□□ 1.7
CDK13-201ENST00000181839 FBLN2P98095 1184 aa25.67■■□□□ 1.7
CDK13-201ENST00000181839 TRIM52Q96A61 297 aa25.66■■□□□ 1.7
CDK13-201ENST00000181839 ZNF326Q5BKZ1 582 aaKnown RBP25.64■■□□□ 1.7
CDK13-201ENST00000181839 FAM50AQ14320 339 aaKnown RBP25.63■■□□□ 1.69
CDK13-201ENST00000181839 RTL5Q5HYW3 569 aaPredicted RBP25.53■■□□□ 1.68
CDK13-201ENST00000181839 NEUROD1Q13562 356 aa25.48■■□□□ 1.67
CDK13-201ENST00000181839 CANXP27824 592 aaKnown RBP25.4■■□□□ 1.66
CDK13-201ENST00000181839 ARID3CA6NKF2 412 aa25.37■■□□□ 1.65
CDK13-201ENST00000181839 A0A0G2JS52 829 aa25.37■■□□□ 1.65
CDK13-201ENST00000181839 SCAF1Q9H7N4 1312 aaKnown RBP25.3■■□□□ 1.64
CDK13-201ENST00000181839 PLEKHG5O94827 1062 aa25.24■■□□□ 1.63
CDK13-201ENST00000181839 NEFMP07197 916 aa25.23■■□□□ 1.63
CDK13-201ENST00000181839 ESF1Q9H501 851 aaKnown RBP25.21■■□□□ 1.63
CDK13-201ENST00000181839 TRIM26Q12899 539 aaPredicted RBP25.21■■□□□ 1.63
CDK13-201ENST00000181839 LOC105371045A0A1W2PR82 267 aa25.2■■□□□ 1.63
CDK13-201ENST00000181839 STAG3Q9UJ98 1225 aa25.11■■□□□ 1.61
CDK13-201ENST00000181839 PABPN1Q86U42 306 aaKnown RBP eCLIP25.1■■□□□ 1.61
CDK13-201ENST00000181839 CHGAP10645 457 aaKnown RBP25.06■■□□□ 1.6
CDK13-201ENST00000181839 HRCP23327 699 aa25.05■■□□□ 1.6
CDK13-201ENST00000181839 SENP3Q9H4L4 574 aaPredicted RBP25.03■■□□□ 1.6
CDK13-201ENST00000181839 ZNF777Q9ULD5 760 aaPredicted RBP25■■□□□ 1.59
CDK13-201ENST00000181839 ZBTB7CA1YPR0 619 aa24.96■■□□□ 1.59
CDK13-201ENST00000181839 P3H3Q8IVL6 736 aa24.92■■□□□ 1.58
CDK13-201ENST00000181839 NPM2Q86SE8 214 aaKnown RBP24.89■■□□□ 1.57
CDK13-201ENST00000181839 TULP1O00294 542 aaPredicted RBP24.88■■□□□ 1.57
CDK13-201ENST00000181839 ANP32CO43423 234 aa24.83■■□□□ 1.56
CDK13-201ENST00000181839 DIEXFQ68CQ4 756 aaKnown RBP24.82■■□□□ 1.56
CDK13-201ENST00000181839 CDK11AQ9UQ88 783 aaPredicted RBP24.77■■□□□ 1.56
CDK13-201ENST00000181839 HSP90AA1P07900 732 aaKnown RBP24.76■■□□□ 1.55
CDK13-201ENST00000181839 C14orf37Q86TY3 774 aa24.68■■□□□ 1.54
CDK13-201ENST00000181839 SALL2Q9Y467 1007 aaPredicted RBP24.67■■□□□ 1.54
CDK13-201ENST00000181839 ARXQ96QS3 562 aa24.62■■□□□ 1.53
CDK13-201ENST00000181839 CDK11BP21127 795 aaKnown RBP24.62■■□□□ 1.53
CDK13-201ENST00000181839 NCBP3Q53F19 620 aaKnown RBP24.58■■□□□ 1.53
CDK13-201ENST00000181839 NPM1P06748 294 aaKnown RBP eCLIP24.55■■□□□ 1.52
CDK13-201ENST00000181839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.55■■□□□ 1.521e-6■□□□□ 10.5
CDK13-201ENST00000181839 ABCC9O60706 1549 aa24.54■■□□□ 1.52
CDK13-201ENST00000181839 ANP32BQ92688 251 aaKnown RBP24.53■■□□□ 1.52
CDK13-201ENST00000181839 HAP1P54257 671 aaPredicted RBP24.52■■□□□ 1.52
CDK13-201ENST00000181839 EIF5BO60841 1220 aaKnown RBP24.45■■□□□ 1.5
CDK13-201ENST00000181839 ANP32AP39687 249 aaKnown RBP24.43■■□□□ 1.5
CDK13-201ENST00000181839 TAOK2Q9UL54 1235 aa24.41■■□□□ 1.5
CDK13-201ENST00000181839 TPRNQ4KMQ1 711 aa24.35■■□□□ 1.49
CDK13-201ENST00000181839 NPHP1O15259 732 aa24.34■■□□□ 1.49
CDK13-201ENST00000181839 GTF3C3Q9Y5Q9 886 aa24.29■■□□□ 1.48
CDK13-201ENST00000181839 UPF2Q9HAU5 1272 aaKnown RBP24.28■■□□□ 1.48
CDK13-201ENST00000181839 ARID4BQ4LE39 1312 aaPredicted RBP24.27■■□□□ 1.48
CDK13-201ENST00000181839 FAM9BQ8IZU0 186 aa24.24■■□□□ 1.47
CDK13-201ENST00000181839 KDM2AQ9Y2K7 1162 aa24.23■■□□□ 1.47
CDK13-201ENST00000181839 LMOD2Q6P5Q4 547 aa24.16■■□□□ 1.46
CDK13-201ENST00000181839 PPP1R15AO75807 674 aaPredicted RBP24.16■■□□□ 1.46
CDK13-201ENST00000181839 CHIC2Q9UKJ5 165 aa24.12■■□□□ 1.45
CDK13-201ENST00000181839 NBR1Q14596 966 aa24.08■■□□□ 1.45
CDK13-201ENST00000181839 WDR43Q15061 677 aaKnown RBP eCLIP24.08■■□□□ 1.45
CDK13-201ENST00000181839 MYH16Q9H6N6 1097 aa24.06■■□□□ 1.44
CDK13-201ENST00000181839 CLSTN1O94985 981 aa24.04■■□□□ 1.44
CDK13-201ENST00000181839 PPM1GO15355 546 aaPredicted RBP24.03■■□□□ 1.44
CDK13-201ENST00000181839 FKBP8Q14318 412 aa23.99■■□□□ 1.43
CDK13-201ENST00000181839 KCNH8Q96L42 1107 aa23.98■■□□□ 1.43
CDK13-201ENST00000181839 SENP3-EIF4A1A0A087X0R7 540 aa23.98■■□□□ 1.43
CDK13-201ENST00000181839 HNRNPUQ00839 825 aaKnown RBP eCLIP23.98■■□□□ 1.43
CDK13-201ENST00000181839 TMC1Q8TDI8 760 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms