Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ADAR-203ENST00000463920 2347 ntTSL 26.73□□□□□ -1.332e-7■□□□□ 8.5
PRPF8Q6P2Q9 MTRR-222ENST00000512311 386 ntTSL 35.07□□□□□ -1.62e-7■□□□□ 8.5
PRPF8Q6P2Q9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22■■□□□ 1.116e-7■□□□□ 8.5
PRPF8Q6P2Q9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.016e-7■□□□□ 8.5
PRPF8Q6P2Q9 RBPMS-205ENST00000517860 1076 ntTSL 2 BASIC10.21□□□□□ -0.786e-7■□□□□ 8.5
PRPF8Q6P2Q9 DNM1-205ENST00000463998 871 ntTSL 413.11□□□□□ -0.315e-7■□□□□ 8.5
PRPF8Q6P2Q9 DNM1-221ENST00000636220 111 ntTSL 50.22□□□□□ -2.375e-7■□□□□ 8.5
PRPF8Q6P2Q9 C3-214ENST00000600763 406 ntTSL 313.11□□□□□ -0.319e-14■□□□□ 8.5
PRPF8Q6P2Q9 NEU1-208ENST00000491768 1875 ntTSL 515.33■□□□□ 0.046e-10■□□□□ 8.5
PRPF8Q6P2Q9 IVD-213ENST00000610693 668 ntTSL 214.78□□□□□ -0.046e-10■□□□□ 8.5
PRPF8Q6P2Q9 NEU1-207ENST00000480384 2214 ntTSL 213.6□□□□□ -0.236e-10■□□□□ 8.5
PRPF8Q6P2Q9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.236e-10■□□□□ 8.5
PRPF8Q6P2Q9 IVD-210ENST00000558610 819 ntTSL 312.74□□□□□ -0.376e-10■□□□□ 8.5
PRPF8Q6P2Q9 NEU1-209ENST00000495807 4616 ntTSL 210.75□□□□□ -0.696e-10■□□□□ 8.5
PRPF8Q6P2Q9 CISD1-201ENST00000333926 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.976e-10■□□□□ 8.5
PRPF8Q6P2Q9 CISD1-202ENST00000464703 698 ntTSL 53.5□□□□□ -1.856e-10■□□□□ 8.5
PRPF8Q6P2Q9 RBM6-216ENST00000478026 480 ntTSL 41.12□□□□□ -2.236e-10■□□□□ 8.5
PRPF8Q6P2Q9 SSH3-211ENST00000534112 544 ntTSL 418.78■□□□□ 0.62e-6■□□□□ 8.5
PRPF8Q6P2Q9 HDGFL2-203ENST00000592417 1349 ntTSL 217.14■□□□□ 0.332e-6■□□□□ 8.5
PRPF8Q6P2Q9 SSH3-209ENST00000532600 555 ntTSL 416.27■□□□□ 0.192e-6■□□□□ 8.5
PRPF8Q6P2Q9 MAP4-215ENST00000497735 2156 ntTSL 28.86□□□□□ -0.992e-6■□□□□ 8.4
PRPF8Q6P2Q9 MAP4-203ENST00000383736 2282 ntTSL 55.65□□□□□ -1.512e-6■□□□□ 8.4
PRPF8Q6P2Q9 MAP4-211ENST00000462206 572 ntTSL 42.5□□□□□ -2.012e-6■□□□□ 8.4
PRPF8Q6P2Q9 LDLR-214ENST00000560628 535 ntTSL 38.74□□□□□ -1.012e-6■□□□□ 8.4
PRPF8Q6P2Q9 REXO5-203ENST00000561474 617 ntTSL 55.27□□□□□ -1.572e-8■□□□□ 8.4
PRPF8Q6P2Q9 REXO5-215ENST00000568334 743 ntTSL 33.79□□□□□ -1.82e-8■□□□□ 8.4
PRPF8Q6P2Q9 BSG-212ENST00000590218 545 ntTSL 216.26■□□□□ 0.191e-8■□□□□ 8.4
PRPF8Q6P2Q9 PLD1-215ENST00000497307 1506 ntTSL 215.67■□□□□ 0.13e-16■□□□□ 8.4
PRPF8Q6P2Q9 BSG-207ENST00000573216 545 ntTSL 415.16■□□□□ 0.021e-8■□□□□ 8.4
PRPF8Q6P2Q9 BSG-210ENST00000576925 611 ntTSL 215.16■□□□□ 0.021e-8■□□□□ 8.4
PRPF8Q6P2Q9 NMT1-211ENST00000591931 748 ntTSL 214.89□□□□□ -0.036e-8■□□□□ 8.4
PRPF8Q6P2Q9 KIAA2026-205ENST00000513355 1967 ntTSL 514.62□□□□□ -0.071e-8■□□□□ 8.4
PRPF8Q6P2Q9 GPR108-209ENST00000597043 244 ntTSL 313.59□□□□□ -0.232e-12■□□□□ 8.4
PRPF8Q6P2Q9 BSG-213ENST00000613627 689 ntTSL 313.04□□□□□ -0.321e-8■□□□□ 8.4
PRPF8Q6P2Q9 BSG-206ENST00000572899 582 ntTSL 212.88□□□□□ -0.351e-8■□□□□ 8.4
PRPF8Q6P2Q9 SAMM50-204ENST00000493161 829 ntTSL 312□□□□□ -0.491e-8■□□□□ 8.4
PRPF8Q6P2Q9 EPAS1-203ENST00000460015 558 ntTSL 411.99□□□□□ -0.491e-8■□□□□ 8.4
PRPF8Q6P2Q9 MMS19-216ENST00000480108 677 ntTSL 210.87□□□□□ -0.671e-8■□□□□ 8.4
PRPF8Q6P2Q9 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.051e-8■□□□□ 8.4
PRPF8Q6P2Q9 HADHA-203ENST00000471743 690 ntTSL 56.2□□□□□ -1.421e-8■□□□□ 8.4
PRPF8Q6P2Q9 KTN1-201ENST00000334975 2485 ntTSL 25.97□□□□□ -1.451e-8■□□□□ 8.4
PRPF8Q6P2Q9 PLD1-207ENST00000460926 1012 ntTSL 25.2□□□□□ -1.583e-16■□□□□ 8.4
PRPF8Q6P2Q9 KTN1-220ENST00000555172 1985 ntTSL 21.46□□□□□ -2.181e-8■□□□□ 8.4
PRPF8Q6P2Q9 KTN1-210ENST00000553624 731 ntTSL 51.16□□□□□ -2.221e-8■□□□□ 8.4
PRPF8Q6P2Q9 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.6□□□□□ -2.311e-8■□□□□ 8.4
PRPF8Q6P2Q9 HSPG2-211ENST00000486901 3586 ntTSL 210.32□□□□□ -0.767e-7■□□□□ 8.4
PRPF8Q6P2Q9 IL17RE-208ENST00000461534 572 ntTSL 48.2□□□□□ -1.13e-7■□□□□ 8.4
PRPF8Q6P2Q9 IL17RE-207ENST00000454992 571 ntTSL 46.49□□□□□ -1.373e-7■□□□□ 8.4
PRPF8Q6P2Q9 SLC22A18-208ENST00000467719 2635 ntTSL 1 (best)14.93□□□□□ -0.022e-22■□□□□ 8.4
PRPF8Q6P2Q9 SLC22A18-212ENST00000498209 782 ntTSL 312.12□□□□□ -0.472e-22■□□□□ 8.4
PRPF8Q6P2Q9 PRRC2B-208ENST00000465931 5366 ntTSL 29.66□□□□□ -0.861e-18■□□□□ 8.4
PRPF8Q6P2Q9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.632e-7■□□□□ 8.4
PRPF8Q6P2Q9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.43■□□□□ 0.542e-7■□□□□ 8.4
PRPF8Q6P2Q9 YJEFN3-202ENST00000458210 2785 ntTSL 211.94□□□□□ -0.52e-7■□□□□ 8.4
PRPF8Q6P2Q9 AC005307.1-201ENST00000567877 1570 ntTSL 3 BASIC7.84□□□□□ -1.161e-13■□□□□ 8.4
PRPF8Q6P2Q9 FAM208B-205ENST00000473789 506 ntTSL 520.8■□□□□ 0.924e-11■□□□□ 8.4
PRPF8Q6P2Q9 FAM208B-210ENST00000496681 522 ntTSL 320.25■□□□□ 0.834e-11■□□□□ 8.4
PRPF8Q6P2Q9 FAM208B-207ENST00000480839 540 ntTSL 316.57■□□□□ 0.244e-11■□□□□ 8.4
PRPF8Q6P2Q9 FAM208B-206ENST00000477043 514 ntTSL 214.15□□□□□ -0.144e-11■□□□□ 8.4
PRPF8Q6P2Q9 COCH-209ENST00000555881 782 ntTSL 218.38■□□□□ 0.534e-9■□□□□ 8.4
PRPF8Q6P2Q9 COCH-210ENST00000556908 775 ntTSL 316.57■□□□□ 0.244e-9■□□□□ 8.4
PRPF8Q6P2Q9 KTN1-215ENST00000554567 730 ntTSL 523.17■■□□□ 1.32e-6■□□□□ 8.4
PRPF8Q6P2Q9 CDK18-206ENST00000462976 794 ntTSL 520.37■□□□□ 0.852e-6■□□□□ 8.4
PRPF8Q6P2Q9 C19orf54-205ENST00000596809 1104 ntTSL 518.29■□□□□ 0.522e-6■□□□□ 8.4
PRPF8Q6P2Q9 CDK18-204ENST00000443813 591 ntTSL 416.77■□□□□ 0.282e-6■□□□□ 8.4
PRPF8Q6P2Q9 DTX3-203ENST00000548478 2270 ntTSL 1 (best)15.94■□□□□ 0.145e-11■□□□□ 8.4
PRPF8Q6P2Q9 CDK18-218ENST00000507067 342 ntTSL 1 (best)15.2■□□□□ 0.022e-6■□□□□ 8.4
PRPF8Q6P2Q9 AMPD2-222ENST00000531203 575 ntTSL 415.09■□□□□ 0.012e-6■□□□□ 8.4
PRPF8Q6P2Q9 CDK18-215ENST00000506215 435 ntTSL 1 (best)14.95□□□□□ -0.022e-6■□□□□ 8.4
PRPF8Q6P2Q9 C19orf54-207ENST00000597507 947 ntTSL 214.8□□□□□ -0.042e-6■□□□□ 8.4
PRPF8Q6P2Q9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.77□□□□□ -0.052e-8■□□□□ 8.4
PRPF8Q6P2Q9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.44□□□□□ -0.12e-8■□□□□ 8.4
PRPF8Q6P2Q9 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.13□□□□□ -0.152e-6■□□□□ 8.4
PRPF8Q6P2Q9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.182e-8■□□□□ 8.4
PRPF8Q6P2Q9 AMPD2-223ENST00000531734 572 ntTSL 413.41□□□□□ -0.262e-6■□□□□ 8.4
PRPF8Q6P2Q9 AMPD2-217ENST00000528270 588 ntTSL 413.36□□□□□ -0.272e-6■□□□□ 8.4
PRPF8Q6P2Q9 TNRC18-210ENST00000497663 588 ntTSL 213.17□□□□□ -0.35e-11■□□□□ 8.4
PRPF8Q6P2Q9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.14□□□□□ -0.312e-6■□□□□ 8.4
PRPF8Q6P2Q9 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.11□□□□□ -0.312e-8■□□□□ 8.4
PRPF8Q6P2Q9 C19orf54-202ENST00000469741 1792 ntTSL 212.82□□□□□ -0.362e-6■□□□□ 8.4
PRPF8Q6P2Q9 NOSIP-205ENST00000596477 865 ntTSL 312.16□□□□□ -0.462e-6■□□□□ 8.4
PRPF8Q6P2Q9 C19orf54-206ENST00000596940 492 ntTSL 312.08□□□□□ -0.482e-6■□□□□ 8.4
PRPF8Q6P2Q9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.522e-8■□□□□ 8.4
PRPF8Q6P2Q9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.542e-8■□□□□ 8.4
PRPF8Q6P2Q9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.62e-6■□□□□ 8.4
PRPF8Q6P2Q9 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.62e-8■□□□□ 8.4
PRPF8Q6P2Q9 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.682e-6■□□□□ 8.4
PRPF8Q6P2Q9 C19orf54-208ENST00000598352 546 ntTSL 1 (best)10.61□□□□□ -0.712e-6■□□□□ 8.4
PRPF8Q6P2Q9 AC073548.1-201ENST00000624088 1882 ntBASIC10.53□□□□□ -0.722e-6■□□□□ 8.4
PRPF8Q6P2Q9 C19orf54-209ENST00000598485 553 ntTSL 5 BASIC9.54□□□□□ -0.882e-6■□□□□ 8.4
PRPF8Q6P2Q9 MGST1-204ENST00000396209 979 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.892e-8■□□□□ 8.4
PRPF8Q6P2Q9 CSNK1A1-208ENST00000523203 775 ntTSL 59.03□□□□□ -0.962e-6■□□□□ 8.4
PRPF8Q6P2Q9 CSNK1A1-206ENST00000515748 620 ntTSL 2 BASIC8.42□□□□□ -1.062e-6■□□□□ 8.4
PRPF8Q6P2Q9 SERPINA5-205ENST00000554276 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.15e-11■□□□□ 8.4
PRPF8Q6P2Q9 PAPD7-203ENST00000511764 741 ntTSL 27.41□□□□□ -1.222e-8■□□□□ 8.4
PRPF8Q6P2Q9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.07□□□□□ -2.242e-8■□□□□ 8.4
PRPF8Q6P2Q9 MGST1-216ENST00000540126 365 ntTSL 2-0.14□□□□□ -2.432e-8■□□□□ 8.4
PRPF8Q6P2Q9 UBAC1-206ENST00000489050 864 ntTSL 38.74□□□□□ -1.017e-17■□□□□ 8.4
PRPF8Q6P2Q9 PLOD1-203ENST00000429000 886 ntTSL 513.36□□□□□ -0.275e-7■□□□□ 8.4
PRPF8Q6P2Q9 PLOD1-208ENST00000485046 991 ntTSL 512.23□□□□□ -0.455e-7■□□□□ 8.4
Retrieved 100 of 73,762 protein–RNA pairs in 4106.5 ms