RNA–Protein interactions for RNA: ENST00000458210.7

YJEFN3-202, Transcript of YjeF N-terminal domain containing 3, humanhuman

TSL 2

Gene YJEFN3, Length 2,785 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3-202ENST00000458210 NISCHQ9Y2I1 1504 aa33.32■■■□□ 2.93
YJEFN3-202ENST00000458210 PELP1Q8IZL8 1130 aaKnown RBP28.67■■■□□ 2.18
YJEFN3-202ENST00000458210 CCDC180Q9P1Z9 1646 aa28.57■■■□□ 2.16
YJEFN3-202ENST00000458210 ZCCHC6Q5VYS8 1495 aaKnown RBP28.06■■■□□ 2.08
YJEFN3-202ENST00000458210 SHROOM4Q9ULL8 1493 aa28■■■□□ 2.07
YJEFN3-202ENST00000458210 MYT1Q01538 1121 aa28■■■□□ 2.07
YJEFN3-202ENST00000458210 DCAF8L2P0C7V8 631 aa27.81■■■□□ 2.04
YJEFN3-202ENST00000458210 HRCP23327 699 aa27.38■■□□□ 1.97
YJEFN3-202ENST00000458210 DCAF1Q9Y4B6 1507 aa27.28■■□□□ 1.96
YJEFN3-202ENST00000458210 ABCC9O60706 1549 aa27.12■■□□□ 1.93
YJEFN3-202ENST00000458210 SUPT5HO00267 1087 aaKnown RBP27.1■■□□□ 1.93
YJEFN3-202ENST00000458210 PPARGC1BQ86YN6 1023 aaKnown RBP26.83■■□□□ 1.89
YJEFN3-202ENST00000458210 SCAF1Q9H7N4 1312 aaKnown RBP26.78■■□□□ 1.88
YJEFN3-202ENST00000458210 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
YJEFN3-202ENST00000458210 MYO15BQ96JP2 1530 aa26.71■■□□□ 1.87
YJEFN3-202ENST00000458210 TTBK1Q5TCY1 1321 aaPredicted RBP26.7■■□□□ 1.87
YJEFN3-202ENST00000458210 NACADO15069 1562 aa26.56■■□□□ 1.84
YJEFN3-202ENST00000458210 RB1CC1Q8TDY2 1594 aa26.27■■□□□ 1.8
YJEFN3-202ENST00000458210 PRKCSHP14314 528 aaPredicted RBP26.24■■□□□ 1.79
YJEFN3-202ENST00000458210 PCGF6Q9BYE7 350 aa26.18■■□□□ 1.78
YJEFN3-202ENST00000458210 RSF1Q96T23 1441 aaPredicted RBP26.15■■□□□ 1.78
YJEFN3-202ENST00000458210 CECR2Q9BXF3 1484 aa26.13■■□□□ 1.77
YJEFN3-202ENST00000458210 BCL11AQ9H165 835 aa26.07■■□□□ 1.76
YJEFN3-202ENST00000458210 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
YJEFN3-202ENST00000458210 UNC13AQ9UPW8 1703 aa25.99■■□□□ 1.75
YJEFN3-202ENST00000458210 MROH2BQ7Z745 1585 aa25.94■■□□□ 1.74
YJEFN3-202ENST00000458210 PABPN1Q86U42 306 aaKnown RBP eCLIP25.84■■□□□ 1.732e-14■■■■■ 26.8
YJEFN3-202ENST00000458210 FAM9AQ8IZU1 332 aaPredicted RBP25.8■■□□□ 1.72
YJEFN3-202ENST00000458210 WIZO95785 1651 aa25.76■■□□□ 1.71
YJEFN3-202ENST00000458210 BICRAQ9NZM4 1560 aa25.72■■□□□ 1.71
YJEFN3-202ENST00000458210 ACIN1Q9UKV3 1341 aaKnown RBP25.64■■□□□ 1.7
YJEFN3-202ENST00000458210 BAZ1AQ9NRL2 1556 aaPredicted RBP25.59■■□□□ 1.69
YJEFN3-202ENST00000458210 CENPBP07199 599 aaPredicted RBP25.58■■□□□ 1.69
YJEFN3-202ENST00000458210 ERICH6Q7L0X2 663 aa25.57■■□□□ 1.68
YJEFN3-202ENST00000458210 GTF3C3Q9Y5Q9 886 aa25.57■■□□□ 1.68
YJEFN3-202ENST00000458210 NEUROD1Q13562 356 aa25.52■■□□□ 1.68
YJEFN3-202ENST00000458210 SMARCA4P51532 1647 aa25.51■■□□□ 1.67
YJEFN3-202ENST00000458210 APLP2Q06481 763 aa25.37■■□□□ 1.65
YJEFN3-202ENST00000458210 LOC105371045A0A1W2PR82 267 aa25.32■■□□□ 1.64
YJEFN3-202ENST00000458210 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
YJEFN3-202ENST00000458210 TRIM41Q8WV44 630 aa25.22■■□□□ 1.63
YJEFN3-202ENST00000458210 ZEB1P37275 1124 aaPredicted RBP25.22■■□□□ 1.63
YJEFN3-202ENST00000458210 CCDC88BA6NC98 1476 aa25.2■■□□□ 1.62
YJEFN3-202ENST00000458210 SMARCA2P51531 1590 aa25.15■■□□□ 1.62
YJEFN3-202ENST00000458210 EIF4G1Q04637 1599 aaKnown RBP25.13■■□□□ 1.61
YJEFN3-202ENST00000458210 ANP32EQ9BTT0 268 aa25.04■■□□□ 1.6
YJEFN3-202ENST00000458210 PEG3Q9GZU2 1588 aa25.03■■□□□ 1.6
YJEFN3-202ENST00000458210 ATAD2BQ9ULI0 1458 aa25.03■■□□□ 1.6
YJEFN3-202ENST00000458210 ABCC8Q09428 1581 aa24.96■■□□□ 1.59
YJEFN3-202ENST00000458210 EHMT2Q96KQ7 1210 aa24.94■■□□□ 1.58
YJEFN3-202ENST00000458210 BAZ1BQ9UIG0 1483 aaKnown RBP24.87■■□□□ 1.57
YJEFN3-202ENST00000458210 CSRNP3Q8WYN3 585 aa24.85■■□□□ 1.57
YJEFN3-202ENST00000458210 TRIM26Q12899 539 aaPredicted RBP24.84■■□□□ 1.57
YJEFN3-202ENST00000458210 NCAPD3P42695 1498 aa24.62■■□□□ 1.53
YJEFN3-202ENST00000458210 SOGA1O94964 1423 aa24.59■■□□□ 1.53
YJEFN3-202ENST00000458210 RUSC2Q8N2Y8 1516 aa24.56■■□□□ 1.52
YJEFN3-202ENST00000458210 HMGXB3Q12766 1538 aa24.54■■□□□ 1.52
YJEFN3-202ENST00000458210 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
YJEFN3-202ENST00000458210 SYNJ1O43426 1573 aa24.51■■□□□ 1.51
YJEFN3-202ENST00000458210 SLC24A1O60721 1099 aa24.45■■□□□ 1.5
YJEFN3-202ENST00000458210 DIEXFQ68CQ4 756 aaKnown RBP24.42■■□□□ 1.5
YJEFN3-202ENST00000458210 CC2D2AQ9P2K1 1620 aa24.4■■□□□ 1.5
YJEFN3-202ENST00000458210 ANO8Q9HCE9 1232 aaPredicted RBP24.32■■□□□ 1.48
YJEFN3-202ENST00000458210 YTHDC1Q96MU7 727 aaKnown RBP24.3■■□□□ 1.48
YJEFN3-202ENST00000458210 CFTRP13569 1480 aa24.26■■□□□ 1.47
YJEFN3-202ENST00000458210 TSHZ2Q9NRE2 1034 aa24.23■■□□□ 1.47
YJEFN3-202ENST00000458210 TOP2BQ02880 1626 aa24.19■■□□□ 1.46
YJEFN3-202ENST00000458210 DNAJC5BQ9UF47 199 aa24.19■■□□□ 1.46
YJEFN3-202ENST00000458210 CUX1P39880 1505 aa24.17■■□□□ 1.46
YJEFN3-202ENST00000458210 EEA1Q15075 1411 aa24.15■■□□□ 1.46
YJEFN3-202ENST00000458210 BIVM-ERCC5R4GMW8 1640 aa24.12■■□□□ 1.45
YJEFN3-202ENST00000458210 UBTFP17480 764 aaKnown RBP24.12■■□□□ 1.45
YJEFN3-202ENST00000458210 CADPSQ9ULU8 1353 aa24.1■■□□□ 1.45
YJEFN3-202ENST00000458210 CEP162Q5TB80 1403 aa24.08■■□□□ 1.45
YJEFN3-202ENST00000458210 TNIKQ9UKE5 1360 aa24.06■■□□□ 1.44
YJEFN3-202ENST00000458210 EIF5BO60841 1220 aaKnown RBP24.04■■□□□ 1.44
YJEFN3-202ENST00000458210 GOLGA3Q08378 1498 aa24.02■■□□□ 1.44
YJEFN3-202ENST00000458210 NESP48681 1621 aa24.02■■□□□ 1.44
YJEFN3-202ENST00000458210 RAPGEF2Q9Y4G8 1499 aa24■■□□□ 1.43
YJEFN3-202ENST00000458210 UBE2Q2Q8WVN8 375 aa23.98■■□□□ 1.43
YJEFN3-202ENST00000458210 PRDM2Q13029 1718 aa23.97■■□□□ 1.43
YJEFN3-202ENST00000458210 CEP164Q9UPV0 1460 aa23.95■■□□□ 1.42
YJEFN3-202ENST00000458210 KIF21BO75037 1637 aa23.94■■□□□ 1.42
YJEFN3-202ENST00000458210 SUPT16HQ9Y5B9 1047 aaKnown RBP23.92■■□□□ 1.42
YJEFN3-202ENST00000458210 RANGAP1P46060 587 aaPredicted RBP23.91■■□□□ 1.42
YJEFN3-202ENST00000458210 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
YJEFN3-202ENST00000458210 SALL2Q9Y467 1007 aaPredicted RBP23.84■■□□□ 1.41
YJEFN3-202ENST00000458210 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
YJEFN3-202ENST00000458210 CCDC136Q96JN2 1154 aa23.8■■□□□ 1.4
YJEFN3-202ENST00000458210 PRXQ9BXM0 1461 aa23.8■■□□□ 1.4
YJEFN3-202ENST00000458210 KIF27Q86VH2 1401 aa23.78■■□□□ 1.4
YJEFN3-202ENST00000458210 CLIP1P30622 1438 aa23.75■■□□□ 1.39
YJEFN3-202ENST00000458210 CUX2O14529 1486 aa23.75■■□□□ 1.39
YJEFN3-202ENST00000458210 DAXXQ9UER7 740 aaPredicted RBP23.75■■□□□ 1.39
YJEFN3-202ENST00000458210 CCER1Q8TC90 406 aaPredicted RBP23.73■■□□□ 1.39
YJEFN3-202ENST00000458210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
YJEFN3-202ENST00000458210 CLSPNQ9HAW4 1339 aa23.71■■□□□ 1.39
YJEFN3-202ENST00000458210 RAD54L2Q9Y4B4 1467 aa23.71■■□□□ 1.39
YJEFN3-202ENST00000458210 IGF1RP08069 1367 aa23.68■■□□□ 1.38
YJEFN3-202ENST00000458210 TOPBP1Q92547 1522 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms