RNA–Protein interactions for RNA: ENST00000597507.1

C19orf54-207, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 947 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-207ENST00000597507 NISCHQ9Y2I1 1504 aa41.83■■■■■ 4.29
C19orf54-207ENST00000597507 ABCC9O60706 1549 aa38.33■■■■□ 3.73
C19orf54-207ENST00000597507 CCDC180Q9P1Z9 1646 aa37.71■■■■□ 3.63
C19orf54-207ENST00000597507 DNAJC5BQ9UF47 199 aa36.56■■■■□ 3.44
C19orf54-207ENST00000597507 RB1CC1Q8TDY2 1594 aa36.18■■■■□ 3.38
C19orf54-207ENST00000597507 NACADO15069 1562 aa35.81■■■■□ 3.32
C19orf54-207ENST00000597507 PABPN1Q86U42 306 aaKnown RBP eCLIP35.66■■■■□ 3.3
C19orf54-207ENST00000597507 DCAF8L2P0C7V8 631 aa35.62■■■■□ 3.29
C19orf54-207ENST00000597507 UNC13AQ9UPW8 1703 aa35.44■■■■□ 3.26
C19orf54-207ENST00000597507 BICRAQ9NZM4 1560 aa35.22■■■■□ 3.23
C19orf54-207ENST00000597507 MYO15BQ96JP2 1530 aa35.11■■■■□ 3.21
C19orf54-207ENST00000597507 CC2D2AQ9P2K1 1620 aa34.59■■■■□ 3.13
C19orf54-207ENST00000597507 CECR2Q9BXF3 1484 aa34.57■■■■□ 3.12
C19orf54-207ENST00000597507 SHROOM4Q9ULL8 1493 aa34.55■■■■□ 3.12
C19orf54-207ENST00000597507 ZCCHC6Q5VYS8 1495 aaKnown RBP34.52■■■■□ 3.12
C19orf54-207ENST00000597507 DCAF1Q9Y4B6 1507 aa34.47■■■■□ 3.11
C19orf54-207ENST00000597507 SCRIBQ14160 1630 aa34.37■■■■□ 3.09
C19orf54-207ENST00000597507 EIF4G1Q04637 1599 aaKnown RBP34.36■■■■□ 3.09
C19orf54-207ENST00000597507 DNAJC5Q9H3Z4 198 aa33.91■■■■□ 3.02
C19orf54-207ENST00000597507 CUX2O14529 1486 aa33.19■■■□□ 2.9
C19orf54-207ENST00000597507 NCAPD3P42695 1498 aa33.1■■■□□ 2.89
C19orf54-207ENST00000597507 ERCC6Q03468 1493 aa33.08■■■□□ 2.89
C19orf54-207ENST00000597507 ATAD2BQ9ULI0 1458 aa32.93■■■□□ 2.86
C19orf54-207ENST00000597507 NESP48681 1621 aa32.8■■■□□ 2.84
C19orf54-207ENST00000597507 HMGXB3Q12766 1538 aa32.75■■■□□ 2.83
C19orf54-207ENST00000597507 SMARCA2P51531 1590 aa32.75■■■□□ 2.83
C19orf54-207ENST00000597507 SMARCA4P51532 1647 aa32.73■■■□□ 2.83
C19orf54-207ENST00000597507 BAZ1BQ9UIG0 1483 aaKnown RBP32.54■■■□□ 2.8
C19orf54-207ENST00000597507 THOC2Q8NI27 1593 aaKnown RBP32.51■■■□□ 2.79
C19orf54-207ENST00000597507 BAZ1AQ9NRL2 1556 aaPredicted RBP32.46■■■□□ 2.79
C19orf54-207ENST00000597507 PEG3Q9GZU2 1588 aa32.41■■■□□ 2.78
C19orf54-207ENST00000597507 LAMC3Q9Y6N6 1575 aa32.4■■■□□ 2.78
C19orf54-207ENST00000597507 KIF21AQ7Z4S6 1674 aa32.33■■■□□ 2.77
C19orf54-207ENST00000597507 MROH2BQ7Z745 1585 aa32.25■■■□□ 2.75
C19orf54-207ENST00000597507 PDS5BQ9NTI5 1447 aa32.24■■■□□ 2.75
C19orf54-207ENST00000597507 TRIM41Q8WV44 630 aa32.19■■■□□ 2.74
C19orf54-207ENST00000597507 CADPSQ9ULU8 1353 aa32.07■■■□□ 2.73
C19orf54-207ENST00000597507 MRC2Q9UBG0 1479 aa32■■■□□ 2.71
C19orf54-207ENST00000597507 WDR62O43379 1518 aa31.94■■■□□ 2.7
C19orf54-207ENST00000597507 WIZO95785 1651 aa31.84■■■□□ 2.69
C19orf54-207ENST00000597507 CEP164Q9UPV0 1460 aa31.75■■■□□ 2.67
C19orf54-207ENST00000597507 FANCD2Q9BXW9 1451 aa31.7■■■□□ 2.66
C19orf54-207ENST00000597507 OSCARQ8IYS5 282 aa31.67■■■□□ 2.66
C19orf54-207ENST00000597507 CFTRP13569 1480 aa31.59■■■□□ 2.65
C19orf54-207ENST00000597507 URB2Q14146 1524 aaKnown RBP31.49■■■□□ 2.63
C19orf54-207ENST00000597507 RSF1Q96T23 1441 aaPredicted RBP31.39■■■□□ 2.62
C19orf54-207ENST00000597507 TOP2AP11388 1531 aaKnown RBP31.34■■■□□ 2.61
C19orf54-207ENST00000597507 RIMBP3CA6NJZ7 1639 aa31.29■■■□□ 2.6
C19orf54-207ENST00000597507 RIMBP3BA6NNM3 1639 aa31.29■■■□□ 2.6
C19orf54-207ENST00000597507 RIMBP3Q9UFD9 1639 aa31.29■■■□□ 2.6
C19orf54-207ENST00000597507 ZNF608Q9ULD9 1512 aaPredicted RBP31.22■■■□□ 2.59
C19orf54-207ENST00000597507 PRDM2Q13029 1718 aa31.18■■■□□ 2.58
C19orf54-207ENST00000597507 IFT140Q96RY7 1462 aa31.14■■■□□ 2.58
C19orf54-207ENST00000597507 ARHGEF11O15085 1522 aa31.13■■■□□ 2.57
C19orf54-207ENST00000597507 CCDC88BA6NC98 1476 aa31.05■■■□□ 2.56
C19orf54-207ENST00000597507 TOPBP1Q92547 1522 aa31.04■■■□□ 2.56
C19orf54-207ENST00000597507 CYB5RLQ6IPT4 315 aa31■■■□□ 2.55
C19orf54-207ENST00000597507 EIF4G3O43432 1585 aaKnown RBP30.95■■■□□ 2.54
C19orf54-207ENST00000597507 ABCC8Q09428 1581 aa30.89■■■□□ 2.54
C19orf54-207ENST00000597507 AQRO60306 1485 aaKnown RBP eCLIP30.87■■■□□ 2.536e-6■■■■□ 25.1
C19orf54-207ENST00000597507 CHD1O14646 1710 aa30.86■■■□□ 2.53
C19orf54-207ENST00000597507 DNMBPQ6XZF7 1577 aa30.85■■■□□ 2.53
C19orf54-207ENST00000597507 TARBP1Q13395 1621 aaKnown RBP30.82■■■□□ 2.52
C19orf54-207ENST00000597507 TRHP20396 242 aaPredicted RBP30.8■■■□□ 2.52
C19orf54-207ENST00000597507 ARAP1Q96P48 1450 aa30.79■■■□□ 2.52
C19orf54-207ENST00000597507 FBLN2P98095 1184 aa30.77■■■□□ 2.52
C19orf54-207ENST00000597507 POLA1P09884 1462 aaPredicted RBP30.69■■■□□ 2.5
C19orf54-207ENST00000597507 RAD54L2Q9Y4B4 1467 aa30.63■■■□□ 2.49
C19orf54-207ENST00000597507 TDRD9Q8NDG6 1382 aaKnown RBP30.59■■■□□ 2.49
C19orf54-207ENST00000597507 SOGA1O94964 1423 aa30.56■■■□□ 2.48
C19orf54-207ENST00000597507 SNAPC4Q5SXM2 1469 aa30.49■■■□□ 2.47
C19orf54-207ENST00000597507 CLASP1Q7Z460 1538 aa30.47■■■□□ 2.47
C19orf54-207ENST00000597507 CHMP7Q8WUX9 453 aaPredicted RBP30.44■■■□□ 2.46
C19orf54-207ENST00000597507 FGD5Q6ZNL6 1462 aa30.42■■■□□ 2.46
C19orf54-207ENST00000597507 WDR97A6NE52 1622 aa30.37■■■□□ 2.45
C19orf54-207ENST00000597507 SYNJ1O43426 1573 aa30.37■■■□□ 2.45
C19orf54-207ENST00000597507 MAGI1Q96QZ7 1491 aaPredicted RBP30.35■■■□□ 2.45
C19orf54-207ENST00000597507 CUX1P39880 1505 aa30.32■■■□□ 2.44
C19orf54-207ENST00000597507 GRIN2BQ13224 1484 aa30.31■■■□□ 2.44
C19orf54-207ENST00000597507 SYNJ2O15056 1496 aa30.28■■■□□ 2.44
C19orf54-207ENST00000597507 AEBP2Q6ZN18 517 aaPredicted RBP30.27■■■□□ 2.44
C19orf54-207ENST00000597507 GAPVD1Q14C86 1478 aa30.19■■■□□ 2.42
C19orf54-207ENST00000597507 PBRM1Q86U86 1689 aa30.16■■■□□ 2.42
C19orf54-207ENST00000597507 ABCA5Q8WWZ7 1642 aa30.03■■■□□ 2.4
C19orf54-207ENST00000597507 ERCC6L2Q5T890 1561 aa30.03■■■□□ 2.4
C19orf54-207ENST00000597507 ABCA10Q8WWZ4 1543 aa30.02■■■□□ 2.4
C19orf54-207ENST00000597507 GRIN2AQ12879 1464 aa29.93■■■□□ 2.38
C19orf54-207ENST00000597507 CEP170Q5SW79 1584 aa29.88■■■□□ 2.37
C19orf54-207ENST00000597507 NUP160Q12769 1436 aa29.87■■■□□ 2.37
C19orf54-207ENST00000597507 ADAMTS12P58397 1594 aa29.82■■■□□ 2.36
C19orf54-207ENST00000597507 WRNQ14191 1432 aaPredicted RBP eCLIP29.79■■■□□ 2.36
C19orf54-207ENST00000597507 SHROOM2Q13796 1616 aa29.78■■■□□ 2.36
C19orf54-207ENST00000597507 KIF13AQ9H1H9 1805 aa29.74■■■□□ 2.35
C19orf54-207ENST00000597507 FHAD1B1AJZ9 1412 aa29.73■■■□□ 2.35
C19orf54-207ENST00000597507 TOP2BQ02880 1626 aa29.65■■■□□ 2.34
C19orf54-207ENST00000597507 BIVM-ERCC5R4GMW8 1640 aa29.65■■■□□ 2.34
C19orf54-207ENST00000597507 PRG4Q92954 1404 aaPredicted RBP29.63■■■□□ 2.33
C19orf54-207ENST00000597507 ERICH3Q5RHP9 1530 aa29.62■■■□□ 2.33
C19orf54-207ENST00000597507 SUPT5HO00267 1087 aaKnown RBP29.62■■■□□ 2.33
C19orf54-207ENST00000597507 JPH4Q96JJ6 628 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms