RNA–Protein interactions for RNA: ENST00000470681.5

C19orf54-203, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2 BASIC

Gene C19orf54, Length 2,521 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-203ENST00000470681 NISCHQ9Y2I1 1504 aa36.71■■■■□ 3.47
C19orf54-203ENST00000470681 SHROOM4Q9ULL8 1493 aa31.31■■■□□ 2.6
C19orf54-203ENST00000470681 ZCCHC6Q5VYS8 1495 aaKnown RBP31.17■■■□□ 2.58
C19orf54-203ENST00000470681 CCDC180Q9P1Z9 1646 aa31.11■■■□□ 2.57
C19orf54-203ENST00000470681 SUPT5HO00267 1087 aaKnown RBP30.88■■■□□ 2.53
C19orf54-203ENST00000470681 MYO15BQ96JP2 1530 aa30.38■■■□□ 2.45
C19orf54-203ENST00000470681 CHIC1Q5VXU3 224 aa30.36■■■□□ 2.45
C19orf54-203ENST00000470681 DCAF1Q9Y4B6 1507 aa30.24■■■□□ 2.43
C19orf54-203ENST00000470681 HRCP23327 699 aa30.11■■■□□ 2.41
C19orf54-203ENST00000470681 DCAF8L2P0C7V8 631 aa29.96■■■□□ 2.39
C19orf54-203ENST00000470681 PCGF6Q9BYE7 350 aa29.69■■■□□ 2.34
C19orf54-203ENST00000470681 ABCC9O60706 1549 aa29.5■■■□□ 2.31
C19orf54-203ENST00000470681 LOC105371045A0A1W2PR82 267 aa29.37■■■□□ 2.29
C19orf54-203ENST00000470681 PPARGC1BQ86YN6 1023 aaKnown RBP29.27■■■□□ 2.28
C19orf54-203ENST00000470681 RSF1Q96T23 1441 aaPredicted RBP29.17■■■□□ 2.26
C19orf54-203ENST00000470681 TRIM26Q12899 539 aaPredicted RBP29.16■■■□□ 2.26
C19orf54-203ENST00000470681 SCRIBQ14160 1630 aa29.06■■■□□ 2.24
C19orf54-203ENST00000470681 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
C19orf54-203ENST00000470681 TRIM41Q8WV44 630 aa28.81■■■□□ 2.2
C19orf54-203ENST00000470681 ZEB1P37275 1124 aaPredicted RBP28.74■■■□□ 2.19
C19orf54-203ENST00000470681 NACADO15069 1562 aa28.63■■■□□ 2.17
C19orf54-203ENST00000470681 CECR2Q9BXF3 1484 aa28.54■■■□□ 2.16
C19orf54-203ENST00000470681 MROH2BQ7Z745 1585 aa28.52■■■□□ 2.16
C19orf54-203ENST00000470681 FAM9AQ8IZU1 332 aaPredicted RBP28.47■■■□□ 2.15
C19orf54-203ENST00000470681 WIZO95785 1651 aa28.37■■■□□ 2.13
C19orf54-203ENST00000470681 BAZ1AQ9NRL2 1556 aaPredicted RBP28.32■■■□□ 2.12
C19orf54-203ENST00000470681 EIF4G1Q04637 1599 aaKnown RBP28.32■■■□□ 2.12
C19orf54-203ENST00000470681 EHMT2Q96KQ7 1210 aa28.11■■■□□ 2.09
C19orf54-203ENST00000470681 TOP2AP11388 1531 aaKnown RBP28.01■■■□□ 2.07
C19orf54-203ENST00000470681 WRNQ14191 1432 aaPredicted RBP eCLIP27.93■■■□□ 2.06
C19orf54-203ENST00000470681 SCAF1Q9H7N4 1312 aaKnown RBP27.93■■■□□ 2.06
C19orf54-203ENST00000470681 PELP1Q8IZL8 1130 aaKnown RBP27.91■■■□□ 2.06
C19orf54-203ENST00000470681 SMARCA4P51532 1647 aa27.88■■■□□ 2.05
C19orf54-203ENST00000470681 SMARCA2P51531 1590 aa27.85■■■□□ 2.05
C19orf54-203ENST00000470681 ABCC8Q09428 1581 aa27.84■■■□□ 2.05
C19orf54-203ENST00000470681 CCDC88BA6NC98 1476 aa27.84■■■□□ 2.05
C19orf54-203ENST00000470681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.81■■■□□ 2.04
C19orf54-203ENST00000470681 CCER1Q8TC90 406 aaPredicted RBP27.77■■■□□ 2.04
C19orf54-203ENST00000470681 CEP162Q5TB80 1403 aa27.75■■■□□ 2.03
C19orf54-203ENST00000470681 TNIKQ9UKE5 1360 aa27.72■■■□□ 2.03
C19orf54-203ENST00000470681 EEA1Q15075 1411 aa27.7■■■□□ 2.03
C19orf54-203ENST00000470681 SOGA1O94964 1423 aa27.65■■■□□ 2.02
C19orf54-203ENST00000470681 UNC13AQ9UPW8 1703 aa27.65■■■□□ 2.02
C19orf54-203ENST00000470681 ACIN1Q9UKV3 1341 aaKnown RBP27.56■■■□□ 2
C19orf54-203ENST00000470681 CSRNP3Q8WYN3 585 aa27.52■■■□□ 2
C19orf54-203ENST00000470681 RUSC2Q8N2Y8 1516 aa27.49■■□□□ 1.99
C19orf54-203ENST00000470681 GOLGA3Q08378 1498 aa27.48■■□□□ 1.99
C19orf54-203ENST00000470681 DIEXFQ68CQ4 756 aaKnown RBP27.48■■□□□ 1.99
C19orf54-203ENST00000470681 NEUROD1Q13562 356 aa27.45■■□□□ 1.98
C19orf54-203ENST00000470681 PEG3Q9GZU2 1588 aa27.42■■□□□ 1.98
C19orf54-203ENST00000470681 TTBK1Q5TCY1 1321 aaPredicted RBP27.35■■□□□ 1.97
C19orf54-203ENST00000470681 UBTFP17480 764 aaKnown RBP27.34■■□□□ 1.97
C19orf54-203ENST00000470681 CENPBP07199 599 aaPredicted RBP27.32■■□□□ 1.96
C19orf54-203ENST00000470681 KIF21BO75037 1637 aa27.32■■□□□ 1.96
C19orf54-203ENST00000470681 BICRAQ9NZM4 1560 aa27.3■■□□□ 1.96
C19orf54-203ENST00000470681 CEP164Q9UPV0 1460 aa27.29■■□□□ 1.96
C19orf54-203ENST00000470681 SYNJ1O43426 1573 aa27.24■■□□□ 1.95
C19orf54-203ENST00000470681 ZNF316A6NFI3 1004 aaPredicted RBP27.22■■□□□ 1.95
C19orf54-203ENST00000470681 GTF3C3Q9Y5Q9 886 aa27.18■■□□□ 1.94
C19orf54-203ENST00000470681 BAZ1BQ9UIG0 1483 aaKnown RBP27.15■■□□□ 1.94
C19orf54-203ENST00000470681 CLIP1P30622 1438 aa27.14■■□□□ 1.94
C19orf54-203ENST00000470681 VPS8Q8N3P4 1428 aa27.12■■□□□ 1.93
C19orf54-203ENST00000470681 ATAD2BQ9ULI0 1458 aa27.05■■□□□ 1.92
C19orf54-203ENST00000470681 PABPN1Q86U42 306 aaKnown RBP eCLIP27.04■■□□□ 1.92
C19orf54-203ENST00000470681 RAPGEF2Q9Y4G8 1499 aa26.99■■□□□ 1.91
C19orf54-203ENST00000470681 HNRNPUL2Q1KMD3 747 aaKnown RBP26.95■■□□□ 1.9
C19orf54-203ENST00000470681 TOP2BQ02880 1626 aa26.92■■□□□ 1.9
C19orf54-203ENST00000470681 BIVM-ERCC5R4GMW8 1640 aa26.84■■□□□ 1.89
C19orf54-203ENST00000470681 MIER1Q8N108 512 aa26.84■■□□□ 1.89
C19orf54-203ENST00000470681 APLP2Q06481 763 aa26.83■■□□□ 1.89
C19orf54-203ENST00000470681 ERICH3Q5RHP9 1530 aa26.82■■□□□ 1.88
C19orf54-203ENST00000470681 CLSPNQ9HAW4 1339 aa26.77■■□□□ 1.88
C19orf54-203ENST00000470681 PRXQ9BXM0 1461 aa26.77■■□□□ 1.88
C19orf54-203ENST00000470681 YTHDC1Q96MU7 727 aaKnown RBP26.73■■□□□ 1.87
C19orf54-203ENST00000470681 ARAP1Q96P48 1450 aa26.71■■□□□ 1.87
C19orf54-203ENST00000470681 DHX57Q6P158 1386 aaKnown RBP26.66■■□□□ 1.86
C19orf54-203ENST00000470681 MYT1Q01538 1121 aa26.61■■□□□ 1.85
C19orf54-203ENST00000470681 RRBP1Q9P2E9 1410 aaKnown RBP26.58■■□□□ 1.85
C19orf54-203ENST00000470681 CUX2O14529 1486 aa26.56■■□□□ 1.84
C19orf54-203ENST00000470681 RANGAP1P46060 587 aaPredicted RBP26.56■■□□□ 1.84
C19orf54-203ENST00000470681 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
C19orf54-203ENST00000470681 CUX1P39880 1505 aa26.54■■□□□ 1.84
C19orf54-203ENST00000470681 KANK4Q5T7N3 995 aaPredicted RBP26.5■■□□□ 1.83
C19orf54-203ENST00000470681 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
C19orf54-203ENST00000470681 KIF27Q86VH2 1401 aa26.48■■□□□ 1.83
C19orf54-203ENST00000470681 ARHGAP35Q9NRY4 1499 aa26.4■■□□□ 1.82
C19orf54-203ENST00000470681 CFTRP13569 1480 aa26.38■■□□□ 1.81
C19orf54-203ENST00000470681 CCNB3Q8WWL7 1395 aa26.37■■□□□ 1.81
C19orf54-203ENST00000470681 MAP3K1Q13233 1512 aa26.29■■□□□ 1.8
C19orf54-203ENST00000470681 PRDM2Q13029 1718 aa26.23■■□□□ 1.79
C19orf54-203ENST00000470681 TIAM1Q13009 1591 aa26.21■■□□□ 1.79
C19orf54-203ENST00000470681 MAPKBP1O60336 1514 aa26.2■■□□□ 1.78
C19orf54-203ENST00000470681 SUPT16HQ9Y5B9 1047 aaKnown RBP26.17■■□□□ 1.78
C19orf54-203ENST00000470681 IGF1RP08069 1367 aa26.16■■□□□ 1.78
C19orf54-203ENST00000470681 RAB3GAP2Q9H2M9 1393 aa26.16■■□□□ 1.78
C19orf54-203ENST00000470681 LRRC9Q6ZRR7 1453 aa26.09■■□□□ 1.77
C19orf54-203ENST00000470681 SETD5Q9C0A6 1442 aa26.06■■□□□ 1.76
C19orf54-203ENST00000470681 CFAP43Q8NDM7 1665 aa26.03■■□□□ 1.76
C19orf54-203ENST00000470681 CARMIL1Q5VZK9 1371 aa26.03■■□□□ 1.76
C19orf54-203ENST00000470681 ITGAEP38570 1179 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms