RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-215ENST00000554567 NISCHQ9Y2I1 1504 aa66.59■■■■■ 8.25
KTN1-215ENST00000554567 ABCC9O60706 1549 aa60.14■■■■■ 7.22
KTN1-215ENST00000554567 CCDC180Q9P1Z9 1646 aa59.75■■■■■ 7.16
KTN1-215ENST00000554567 RB1CC1Q8TDY2 1594 aa57.05■■■■■ 6.72
KTN1-215ENST00000554567 DNAJC5BQ9UF47 199 aa56.62■■■■■ 6.65
KTN1-215ENST00000554567 DCAF8L2P0C7V8 631 aa56.59■■■■■ 6.65
KTN1-215ENST00000554567 NACADO15069 1562 aa56.59■■■■■ 6.65
KTN1-215ENST00000554567 PABPN1Q86U42 306 aaKnown RBP eCLIP56.05■■■■■ 6.56
KTN1-215ENST00000554567 UNC13AQ9UPW8 1703 aa55.74■■■■■ 6.51
KTN1-215ENST00000554567 MYO15BQ96JP2 1530 aa55.66■■■■■ 6.5
KTN1-215ENST00000554567 BICRAQ9NZM4 1560 aa55.38■■■■■ 6.46
KTN1-215ENST00000554567 ZCCHC6Q5VYS8 1495 aaKnown RBP55.11■■■■■ 6.41
KTN1-215ENST00000554567 DCAF1Q9Y4B6 1507 aa54.9■■■■■ 6.38
KTN1-215ENST00000554567 SCRIBQ14160 1630 aa54.58■■■■■ 6.33
KTN1-215ENST00000554567 SHROOM4Q9ULL8 1493 aa54.5■■■■■ 6.32
KTN1-215ENST00000554567 CC2D2AQ9P2K1 1620 aa54.24■■■■■ 6.27
KTN1-215ENST00000554567 CECR2Q9BXF3 1484 aa54.16■■■■■ 6.26
KTN1-215ENST00000554567 EIF4G1Q04637 1599 aaKnown RBP54.06■■■■■ 6.24
KTN1-215ENST00000554567 NCAPD3P42695 1498 aa52.26■■■■■ 5.96
KTN1-215ENST00000554567 ATAD2BQ9ULI0 1458 aa52.1■■■■■ 5.93
KTN1-215ENST00000554567 DNAJC5Q9H3Z4 198 aa52.09■■■■■ 5.93
KTN1-215ENST00000554567 SMARCA4P51532 1647 aa51.98■■■■■ 5.91
KTN1-215ENST00000554567 ERCC6Q03468 1493 aa51.93■■■■■ 5.9
KTN1-215ENST00000554567 SMARCA2P51531 1590 aa51.91■■■■■ 5.9
KTN1-215ENST00000554567 HMGXB3Q12766 1538 aa51.81■■■■■ 5.88
KTN1-215ENST00000554567 CUX2O14529 1486 aa51.8■■■■■ 5.88
KTN1-215ENST00000554567 BAZ1AQ9NRL2 1556 aaPredicted RBP51.69■■■■■ 5.86
KTN1-215ENST00000554567 BAZ1BQ9UIG0 1483 aaKnown RBP51.61■■■■■ 5.85
KTN1-215ENST00000554567 NESP48681 1621 aa51.6■■■■■ 5.85
KTN1-215ENST00000554567 PEG3Q9GZU2 1588 aa51.4■■■■■ 5.82
KTN1-215ENST00000554567 MROH2BQ7Z745 1585 aa51.35■■■■■ 5.81
KTN1-215ENST00000554567 LAMC3Q9Y6N6 1575 aa51.1■■■■■ 5.77
KTN1-215ENST00000554567 THOC2Q8NI27 1593 aaKnown RBP50.99■■■■■ 5.75
KTN1-215ENST00000554567 PDS5BQ9NTI5 1447 aa50.87■■■■■ 5.73
KTN1-215ENST00000554567 KIF21AQ7Z4S6 1674 aa50.86■■■■■ 5.73
KTN1-215ENST00000554567 WIZO95785 1651 aa50.73■■■■■ 5.71
KTN1-215ENST00000554567 CADPSQ9ULU8 1353 aa50.71■■■■■ 5.71
KTN1-215ENST00000554567 MRC2Q9UBG0 1479 aa50.43■■■■■ 5.66
KTN1-215ENST00000554567 WDR62O43379 1518 aa50.26■■■■■ 5.64
KTN1-215ENST00000554567 RSF1Q96T23 1441 aaPredicted RBP50.22■■■■■ 5.63
KTN1-215ENST00000554567 CEP164Q9UPV0 1460 aa50.2■■■■■ 5.63
KTN1-215ENST00000554567 FANCD2Q9BXW9 1451 aa50.14■■■■■ 5.62
KTN1-215ENST00000554567 CFTRP13569 1480 aa50.06■■■■■ 5.6
KTN1-215ENST00000554567 TOP2AP11388 1531 aaKnown RBP50.02■■■■■ 5.6
KTN1-215ENST00000554567 TRIM41Q8WV44 630 aa49.87■■■■■ 5.57
KTN1-215ENST00000554567 URB2Q14146 1524 aaKnown RBP49.74■■■■■ 5.55
KTN1-215ENST00000554567 OSCARQ8IYS5 282 aa49.55■■■■■ 5.52
KTN1-215ENST00000554567 CCDC88BA6NC98 1476 aa49.53■■■■■ 5.52
KTN1-215ENST00000554567 PRDM2Q13029 1718 aa49.46■■■■■ 5.51
KTN1-215ENST00000554567 IFT140Q96RY7 1462 aa49.19■■■■■ 5.47
KTN1-215ENST00000554567 ZNF608Q9ULD9 1512 aaPredicted RBP49.19■■■■■ 5.46
KTN1-215ENST00000554567 TOPBP1Q92547 1522 aa49.16■■■■■ 5.46
KTN1-215ENST00000554567 ABCC8Q09428 1581 aa49.01■■■■■ 5.44
KTN1-215ENST00000554567 DNMBPQ6XZF7 1577 aa48.93■■■■■ 5.42
KTN1-215ENST00000554567 EIF4G3O43432 1585 aaKnown RBP48.84■■■■■ 5.41
KTN1-215ENST00000554567 RIMBP3CA6NJZ7 1639 aa48.83■■■■■ 5.41
KTN1-215ENST00000554567 RIMBP3BA6NNM3 1639 aa48.83■■■■■ 5.41
KTN1-215ENST00000554567 RIMBP3Q9UFD9 1639 aa48.83■■■■■ 5.41
KTN1-215ENST00000554567 AQRO60306 1485 aaKnown RBP eCLIP48.75■■■■■ 5.42e-32■□□□□ 9.1
KTN1-215ENST00000554567 TARBP1Q13395 1621 aaKnown RBP48.69■■■■■ 5.39
KTN1-215ENST00000554567 ARHGEF11O15085 1522 aa48.65■■■■■ 5.38
KTN1-215ENST00000554567 POLA1P09884 1462 aaPredicted RBP48.64■■■■■ 5.38
KTN1-215ENST00000554567 FBLN2P98095 1184 aa48.59■■■■■ 5.37
KTN1-215ENST00000554567 RAD54L2Q9Y4B4 1467 aa48.54■■■■■ 5.36
KTN1-215ENST00000554567 CHD1O14646 1710 aa48.53■■■■■ 5.36
KTN1-215ENST00000554567 SOGA1O94964 1423 aa48.48■■■■■ 5.35
KTN1-215ENST00000554567 CYB5RLQ6IPT4 315 aa48.46■■■■■ 5.35
KTN1-215ENST00000554567 TDRD9Q8NDG6 1382 aaKnown RBP48.44■■■■■ 5.35
KTN1-215ENST00000554567 FGD5Q6ZNL6 1462 aa48.34■■■■■ 5.33
KTN1-215ENST00000554567 CUX1P39880 1505 aa48.24■■■■■ 5.31
KTN1-215ENST00000554567 SNAPC4Q5SXM2 1469 aa48.2■■■■■ 5.31
KTN1-215ENST00000554567 ARAP1Q96P48 1450 aa48.16■■■■■ 5.3
KTN1-215ENST00000554567 CHMP7Q8WUX9 453 aaPredicted RBP48.14■■■■■ 5.3
KTN1-215ENST00000554567 WDR97A6NE52 1622 aa48.1■■■■■ 5.29
KTN1-215ENST00000554567 SUPT5HO00267 1087 aaKnown RBP48.06■■■■■ 5.28
KTN1-215ENST00000554567 TRHP20396 242 aaPredicted RBP48.03■■■■■ 5.28
KTN1-215ENST00000554567 GRIN2BQ13224 1484 aa48.03■■■■■ 5.28
KTN1-215ENST00000554567 MAGI1Q96QZ7 1491 aaPredicted RBP48.02■■■■■ 5.28
KTN1-215ENST00000554567 SYNJ1O43426 1573 aa47.92■■■■■ 5.26
KTN1-215ENST00000554567 CLASP1Q7Z460 1538 aa47.92■■■■■ 5.26
KTN1-215ENST00000554567 SYNJ2O15056 1496 aa47.88■■■■■ 5.26
KTN1-215ENST00000554567 GAPVD1Q14C86 1478 aa47.86■■■■■ 5.25
KTN1-215ENST00000554567 PBRM1Q86U86 1689 aa47.79■■■■■ 5.24
KTN1-215ENST00000554567 ABCA10Q8WWZ4 1543 aa47.72■■■■■ 5.23
KTN1-215ENST00000554567 ABCA5Q8WWZ7 1642 aa47.64■■■■■ 5.22
KTN1-215ENST00000554567 WRNQ14191 1432 aaPredicted RBP eCLIP47.56■■■■■ 5.2
KTN1-215ENST00000554567 GRIN2AQ12879 1464 aa47.4■■■■■ 5.18
KTN1-215ENST00000554567 TOP2BQ02880 1626 aa47.38■■■■■ 5.18
KTN1-215ENST00000554567 BIVM-ERCC5R4GMW8 1640 aa47.36■■■■■ 5.17
KTN1-215ENST00000554567 ADAMTS12P58397 1594 aa47.31■■■■■ 5.16
KTN1-215ENST00000554567 ERCC6L2Q5T890 1561 aa47.25■■■■■ 5.15
KTN1-215ENST00000554567 CEP170Q5SW79 1584 aa47.24■■■■■ 5.15
KTN1-215ENST00000554567 FHAD1B1AJZ9 1412 aa47.22■■■■■ 5.15
KTN1-215ENST00000554567 NUP160Q12769 1436 aa47.22■■■■■ 5.15
KTN1-215ENST00000554567 ERICH3Q5RHP9 1530 aa47.11■■■■■ 5.13
KTN1-215ENST00000554567 SHROOM2Q13796 1616 aa47■■■■■ 5.11
KTN1-215ENST00000554567 PRG4Q92954 1404 aaPredicted RBP46.88■■■■■ 5.09
KTN1-215ENST00000554567 JPH4Q96JJ6 628 aa46.87■■■■■ 5.09
KTN1-215ENST00000554567 AEBP2Q6ZN18 517 aaPredicted RBP46.76■■■■■ 5.08
KTN1-215ENST00000554567 RUSC2Q8N2Y8 1516 aa46.64■■■■■ 5.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms