RNA–Protein interactions for RNA: ENST00000469741.6

C19orf54-202, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-202ENST00000469741 NISCHQ9Y2I1 1504 aa36.72■■■■□ 3.47
C19orf54-202ENST00000469741 CCDC180Q9P1Z9 1646 aa32.42■■■□□ 2.78
C19orf54-202ENST00000469741 ABCC9O60706 1549 aa31.93■■■□□ 2.7
C19orf54-202ENST00000469741 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
C19orf54-202ENST00000469741 ZCCHC6Q5VYS8 1495 aaKnown RBP30.59■■■□□ 2.49
C19orf54-202ENST00000469741 RB1CC1Q8TDY2 1594 aa30.5■■■□□ 2.47
C19orf54-202ENST00000469741 NACADO15069 1562 aa30.48■■■□□ 2.47
C19orf54-202ENST00000469741 MYO15BQ96JP2 1530 aa30.25■■■□□ 2.43
C19orf54-202ENST00000469741 DCAF1Q9Y4B6 1507 aa30.21■■■□□ 2.43
C19orf54-202ENST00000469741 UNC13AQ9UPW8 1703 aa30.04■■■□□ 2.4
C19orf54-202ENST00000469741 PABPN1Q86U42 306 aaKnown RBP eCLIP29.97■■■□□ 2.39
C19orf54-202ENST00000469741 SCRIBQ14160 1630 aa29.84■■■□□ 2.37
C19orf54-202ENST00000469741 BICRAQ9NZM4 1560 aa29.79■■■□□ 2.36
C19orf54-202ENST00000469741 DNAJC5BQ9UF47 199 aa29.43■■■□□ 2.3
C19orf54-202ENST00000469741 SHROOM4Q9ULL8 1493 aa29.34■■■□□ 2.29
C19orf54-202ENST00000469741 EIF4G1Q04637 1599 aaKnown RBP28.91■■■□□ 2.22
C19orf54-202ENST00000469741 CC2D2AQ9P2K1 1620 aa28.82■■■□□ 2.2
C19orf54-202ENST00000469741 CECR2Q9BXF3 1484 aa28.78■■■□□ 2.2
C19orf54-202ENST00000469741 SMARCA4P51532 1647 aa28.46■■■□□ 2.15
C19orf54-202ENST00000469741 MROH2BQ7Z745 1585 aa28.42■■■□□ 2.14
C19orf54-202ENST00000469741 BAZ1AQ9NRL2 1556 aaPredicted RBP28.35■■■□□ 2.13
C19orf54-202ENST00000469741 ATAD2BQ9ULI0 1458 aa28.31■■■□□ 2.12
C19orf54-202ENST00000469741 NCAPD3P42695 1498 aa28.2■■■□□ 2.11
C19orf54-202ENST00000469741 SMARCA2P51531 1590 aa28.13■■■□□ 2.09
C19orf54-202ENST00000469741 WIZO95785 1651 aa28.13■■■□□ 2.09
C19orf54-202ENST00000469741 PEG3Q9GZU2 1588 aa28.1■■■□□ 2.09
C19orf54-202ENST00000469741 RSF1Q96T23 1441 aaPredicted RBP28.09■■■□□ 2.09
C19orf54-202ENST00000469741 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
C19orf54-202ENST00000469741 HMGXB3Q12766 1538 aa28■■■□□ 2.07
C19orf54-202ENST00000469741 NESP48681 1621 aa27.73■■■□□ 2.03
C19orf54-202ENST00000469741 SUPT5HO00267 1087 aaKnown RBP27.67■■■□□ 2.02
C19orf54-202ENST00000469741 TOP2AP11388 1531 aaKnown RBP27.66■■■□□ 2.02
C19orf54-202ENST00000469741 CCDC88BA6NC98 1476 aa27.47■■□□□ 1.99
C19orf54-202ENST00000469741 CADPSQ9ULU8 1353 aa27.42■■□□□ 1.98
C19orf54-202ENST00000469741 LAMC3Q9Y6N6 1575 aa27.38■■□□□ 1.97
C19orf54-202ENST00000469741 ERCC6Q03468 1493 aa27.36■■□□□ 1.97
C19orf54-202ENST00000469741 KIF21AQ7Z4S6 1674 aa27.29■■□□□ 1.96
C19orf54-202ENST00000469741 CFTRP13569 1480 aa27.28■■□□□ 1.96
C19orf54-202ENST00000469741 PDS5BQ9NTI5 1447 aa27.19■■□□□ 1.94
C19orf54-202ENST00000469741 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
C19orf54-202ENST00000469741 THOC2Q8NI27 1593 aaKnown RBP27.12■■□□□ 1.93
C19orf54-202ENST00000469741 CEP164Q9UPV0 1460 aa27.02■■□□□ 1.92
C19orf54-202ENST00000469741 PRDM2Q13029 1718 aa26.99■■□□□ 1.91
C19orf54-202ENST00000469741 MRC2Q9UBG0 1479 aa26.96■■□□□ 1.91
C19orf54-202ENST00000469741 CUX2O14529 1486 aa26.93■■□□□ 1.9
C19orf54-202ENST00000469741 URB2Q14146 1524 aaKnown RBP26.93■■□□□ 1.9
C19orf54-202ENST00000469741 WDR62O43379 1518 aa26.87■■□□□ 1.89
C19orf54-202ENST00000469741 CHIC1Q5VXU3 224 aa26.79■■□□□ 1.88
C19orf54-202ENST00000469741 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
C19orf54-202ENST00000469741 CUX1P39880 1505 aa26.62■■□□□ 1.85
C19orf54-202ENST00000469741 DNMBPQ6XZF7 1577 aa26.61■■□□□ 1.85
C19orf54-202ENST00000469741 ABCC8Q09428 1581 aa26.58■■□□□ 1.85
C19orf54-202ENST00000469741 ZNF608Q9ULD9 1512 aaPredicted RBP26.53■■□□□ 1.84
C19orf54-202ENST00000469741 POLA1P09884 1462 aaPredicted RBP26.52■■□□□ 1.84
C19orf54-202ENST00000469741 RAD54L2Q9Y4B4 1467 aa26.51■■□□□ 1.83
C19orf54-202ENST00000469741 FGD5Q6ZNL6 1462 aa26.47■■□□□ 1.83
C19orf54-202ENST00000469741 SYNJ1O43426 1573 aa26.43■■□□□ 1.82
C19orf54-202ENST00000469741 TARBP1Q13395 1621 aaKnown RBP26.43■■□□□ 1.82
C19orf54-202ENST00000469741 IFT140Q96RY7 1462 aa26.42■■□□□ 1.82
C19orf54-202ENST00000469741 WRNQ14191 1432 aaPredicted RBP eCLIP26.4■■□□□ 1.82
C19orf54-202ENST00000469741 SOGA1O94964 1423 aa26.4■■□□□ 1.82
C19orf54-202ENST00000469741 AQRO60306 1485 aaKnown RBP eCLIP26.38■■□□□ 1.816e-6■■■■□ 25.1
C19orf54-202ENST00000469741 TDRD9Q8NDG6 1382 aaKnown RBP26.34■■□□□ 1.81
C19orf54-202ENST00000469741 TOP2BQ02880 1626 aa26.31■■□□□ 1.8
C19orf54-202ENST00000469741 BIVM-ERCC5R4GMW8 1640 aa26.29■■□□□ 1.8
C19orf54-202ENST00000469741 EIF4G3O43432 1585 aaKnown RBP26.29■■□□□ 1.8
C19orf54-202ENST00000469741 WDR97A6NE52 1622 aa26.2■■□□□ 1.78
C19orf54-202ENST00000469741 DNAJC5Q9H3Z4 198 aa26.18■■□□□ 1.78
C19orf54-202ENST00000469741 ABCA10Q8WWZ4 1543 aa26.15■■□□□ 1.78
C19orf54-202ENST00000469741 GAPVD1Q14C86 1478 aa26.07■■□□□ 1.76
C19orf54-202ENST00000469741 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
C19orf54-202ENST00000469741 SNAPC4Q5SXM2 1469 aa26.04■■□□□ 1.76
C19orf54-202ENST00000469741 FBLN2P98095 1184 aa26.02■■□□□ 1.76
C19orf54-202ENST00000469741 TRIM41Q8WV44 630 aa26■■□□□ 1.75
C19orf54-202ENST00000469741 PBRM1Q86U86 1689 aa26■■□□□ 1.75
C19orf54-202ENST00000469741 GRIN2BQ13224 1484 aa25.99■■□□□ 1.75
C19orf54-202ENST00000469741 CHD1O14646 1710 aa25.98■■□□□ 1.75
C19orf54-202ENST00000469741 OSCARQ8IYS5 282 aa25.96■■□□□ 1.75
C19orf54-202ENST00000469741 RUSC2Q8N2Y8 1516 aa25.9■■□□□ 1.74
C19orf54-202ENST00000469741 MAGI1Q96QZ7 1491 aaPredicted RBP25.87■■□□□ 1.73
C19orf54-202ENST00000469741 CHMP7Q8WUX9 453 aaPredicted RBP25.87■■□□□ 1.73
C19orf54-202ENST00000469741 SYNJ2O15056 1496 aa25.82■■□□□ 1.72
C19orf54-202ENST00000469741 IGF1RP08069 1367 aa25.81■■□□□ 1.72
C19orf54-202ENST00000469741 ADAMTS12P58397 1594 aa25.79■■□□□ 1.72
C19orf54-202ENST00000469741 ERICH3Q5RHP9 1530 aa25.78■■□□□ 1.72
C19orf54-202ENST00000469741 KIF27Q86VH2 1401 aa25.78■■□□□ 1.72
C19orf54-202ENST00000469741 LOC105371045A0A1W2PR82 267 aa25.77■■□□□ 1.72
C19orf54-202ENST00000469741 FHAD1B1AJZ9 1412 aa25.71■■□□□ 1.71
C19orf54-202ENST00000469741 GRIN2AQ12879 1464 aa25.71■■□□□ 1.71
C19orf54-202ENST00000469741 CEP170Q5SW79 1584 aa25.65■■□□□ 1.7
C19orf54-202ENST00000469741 CLASP1Q7Z460 1538 aa25.64■■□□□ 1.7
C19orf54-202ENST00000469741 CARMIL1Q5VZK9 1371 aa25.6■■□□□ 1.69
C19orf54-202ENST00000469741 RIMBP3CA6NJZ7 1639 aa25.58■■□□□ 1.69
C19orf54-202ENST00000469741 RIMBP3BA6NNM3 1639 aa25.58■■□□□ 1.69
C19orf54-202ENST00000469741 RIMBP3Q9UFD9 1639 aa25.58■■□□□ 1.69
C19orf54-202ENST00000469741 NUP160Q12769 1436 aa25.58■■□□□ 1.69
C19orf54-202ENST00000469741 FAM9AQ8IZU1 332 aaPredicted RBP25.57■■□□□ 1.68
C19orf54-202ENST00000469741 ARHGEF11O15085 1522 aa25.57■■□□□ 1.68
C19orf54-202ENST00000469741 CUL7Q14999 1698 aa25.53■■□□□ 1.68
C19orf54-202ENST00000469741 ERCC6L2Q5T890 1561 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms