RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 NISCHQ9Y2I1 1504 aa34.68■■■■□ 3.14
C19orf54-206ENST00000596940 CCDC180Q9P1Z9 1646 aa30.98■■■□□ 2.55
C19orf54-206ENST00000596940 ABCC9O60706 1549 aa30.91■■■□□ 2.54
C19orf54-206ENST00000596940 RB1CC1Q8TDY2 1594 aa29.51■■■□□ 2.31
C19orf54-206ENST00000596940 NACADO15069 1562 aa29.36■■■□□ 2.29
C19orf54-206ENST00000596940 DCAF8L2P0C7V8 631 aa29.36■■■□□ 2.29
C19orf54-206ENST00000596940 MYO15BQ96JP2 1530 aa29.04■■■□□ 2.24
C19orf54-206ENST00000596940 PABPN1Q86U42 306 aaKnown RBP eCLIP28.87■■■□□ 2.21
C19orf54-206ENST00000596940 DNAJC5BQ9UF47 199 aa28.87■■■□□ 2.21
C19orf54-206ENST00000596940 ZCCHC6Q5VYS8 1495 aaKnown RBP28.75■■■□□ 2.19
C19orf54-206ENST00000596940 DCAF1Q9Y4B6 1507 aa28.69■■■□□ 2.18
C19orf54-206ENST00000596940 UNC13AQ9UPW8 1703 aa28.57■■■□□ 2.16
C19orf54-206ENST00000596940 BICRAQ9NZM4 1560 aa28.53■■■□□ 2.16
C19orf54-206ENST00000596940 SHROOM4Q9ULL8 1493 aa28.35■■■□□ 2.13
C19orf54-206ENST00000596940 SCRIBQ14160 1630 aa28.22■■■□□ 2.11
C19orf54-206ENST00000596940 EIF4G1Q04637 1599 aaKnown RBP27.88■■■□□ 2.05
C19orf54-206ENST00000596940 CC2D2AQ9P2K1 1620 aa27.88■■■□□ 2.05
C19orf54-206ENST00000596940 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
C19orf54-206ENST00000596940 NCAPD3P42695 1498 aa27.14■■□□□ 1.94
C19orf54-206ENST00000596940 ATAD2BQ9ULI0 1458 aa27.03■■□□□ 1.92
C19orf54-206ENST00000596940 SMARCA2P51531 1590 aa26.98■■□□□ 1.91
C19orf54-206ENST00000596940 SMARCA4P51532 1647 aa26.96■■□□□ 1.91
C19orf54-206ENST00000596940 BAZ1AQ9NRL2 1556 aaPredicted RBP26.93■■□□□ 1.9
C19orf54-206ENST00000596940 HMGXB3Q12766 1538 aa26.89■■□□□ 1.89
C19orf54-206ENST00000596940 BAZ1BQ9UIG0 1483 aaKnown RBP26.8■■□□□ 1.88
C19orf54-206ENST00000596940 ERCC6Q03468 1493 aa26.76■■□□□ 1.87
C19orf54-206ENST00000596940 PEG3Q9GZU2 1588 aa26.74■■□□□ 1.87
C19orf54-206ENST00000596940 MROH2BQ7Z745 1585 aa26.67■■□□□ 1.86
C19orf54-206ENST00000596940 CUX2O14529 1486 aa26.65■■□□□ 1.86
C19orf54-206ENST00000596940 NESP48681 1621 aa26.54■■□□□ 1.84
C19orf54-206ENST00000596940 DNAJC5Q9H3Z4 198 aa26.53■■□□□ 1.84
C19orf54-206ENST00000596940 LAMC3Q9Y6N6 1575 aa26.45■■□□□ 1.82
C19orf54-206ENST00000596940 PDS5BQ9NTI5 1447 aa26.4■■□□□ 1.82
C19orf54-206ENST00000596940 CADPSQ9ULU8 1353 aa26.35■■□□□ 1.81
C19orf54-206ENST00000596940 WIZO95785 1651 aa26.29■■□□□ 1.8
C19orf54-206ENST00000596940 RSF1Q96T23 1441 aaPredicted RBP26.25■■□□□ 1.79
C19orf54-206ENST00000596940 THOC2Q8NI27 1593 aaKnown RBP26.2■■□□□ 1.78
C19orf54-206ENST00000596940 KIF21AQ7Z4S6 1674 aa26.1■■□□□ 1.77
C19orf54-206ENST00000596940 MRC2Q9UBG0 1479 aa26.08■■□□□ 1.77
C19orf54-206ENST00000596940 TOP2AP11388 1531 aaKnown RBP26.07■■□□□ 1.76
C19orf54-206ENST00000596940 CFTRP13569 1480 aa26.04■■□□□ 1.76
C19orf54-206ENST00000596940 CEP164Q9UPV0 1460 aa26.01■■□□□ 1.75
C19orf54-206ENST00000596940 FANCD2Q9BXW9 1451 aa25.99■■□□□ 1.75
C19orf54-206ENST00000596940 WDR62O43379 1518 aa25.96■■□□□ 1.75
C19orf54-206ENST00000596940 CCDC88BA6NC98 1476 aa25.79■■□□□ 1.72
C19orf54-206ENST00000596940 URB2Q14146 1524 aaKnown RBP25.71■■□□□ 1.71
C19orf54-206ENST00000596940 OSCARQ8IYS5 282 aa25.57■■□□□ 1.68
C19orf54-206ENST00000596940 ABCC8Q09428 1581 aa25.56■■□□□ 1.68
C19orf54-206ENST00000596940 PRDM2Q13029 1718 aa25.55■■□□□ 1.68
C19orf54-206ENST00000596940 IFT140Q96RY7 1462 aa25.52■■□□□ 1.68
C19orf54-206ENST00000596940 TOPBP1Q92547 1522 aa25.48■■□□□ 1.67
C19orf54-206ENST00000596940 TRIM41Q8WV44 630 aa25.4■■□□□ 1.66
C19orf54-206ENST00000596940 DNMBPQ6XZF7 1577 aa25.39■■□□□ 1.65
C19orf54-206ENST00000596940 ZNF608Q9ULD9 1512 aaPredicted RBP25.37■■□□□ 1.65
C19orf54-206ENST00000596940 SUPT5HO00267 1087 aaKnown RBP25.26■■□□□ 1.63
C19orf54-206ENST00000596940 POLA1P09884 1462 aaPredicted RBP25.23■■□□□ 1.63
C19orf54-206ENST00000596940 AQRO60306 1485 aaKnown RBP eCLIP25.21■■□□□ 1.636e-6■■■■□ 25.1
C19orf54-206ENST00000596940 SOGA1O94964 1423 aa25.2■■□□□ 1.63
C19orf54-206ENST00000596940 EIF4G3O43432 1585 aaKnown RBP25.18■■□□□ 1.62
C19orf54-206ENST00000596940 TARBP1Q13395 1621 aaKnown RBP25.18■■□□□ 1.62
C19orf54-206ENST00000596940 RAD54L2Q9Y4B4 1467 aa25.13■■□□□ 1.61
C19orf54-206ENST00000596940 FBLN2P98095 1184 aa25.12■■□□□ 1.61
C19orf54-206ENST00000596940 TDRD9Q8NDG6 1382 aaKnown RBP25.11■■□□□ 1.61
C19orf54-206ENST00000596940 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
C19orf54-206ENST00000596940 CUX1P39880 1505 aa25.06■■□□□ 1.6
C19orf54-206ENST00000596940 WDR97A6NE52 1622 aa25.03■■□□□ 1.6
C19orf54-206ENST00000596940 CHMP7Q8WUX9 453 aaPredicted RBP24.99■■□□□ 1.59
C19orf54-206ENST00000596940 ARHGEF11O15085 1522 aa24.98■■□□□ 1.59
C19orf54-206ENST00000596940 RIMBP3CA6NJZ7 1639 aa24.97■■□□□ 1.59
C19orf54-206ENST00000596940 RIMBP3BA6NNM3 1639 aa24.97■■□□□ 1.59
C19orf54-206ENST00000596940 RIMBP3Q9UFD9 1639 aa24.97■■□□□ 1.59
C19orf54-206ENST00000596940 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
C19orf54-206ENST00000596940 SNAPC4Q5SXM2 1469 aa24.93■■□□□ 1.58
C19orf54-206ENST00000596940 MAGI1Q96QZ7 1491 aaPredicted RBP24.93■■□□□ 1.58
C19orf54-206ENST00000596940 CYB5RLQ6IPT4 315 aa24.91■■□□□ 1.58
C19orf54-206ENST00000596940 CHD1O14646 1710 aa24.89■■□□□ 1.58
C19orf54-206ENST00000596940 GAPVD1Q14C86 1478 aa24.87■■□□□ 1.57
C19orf54-206ENST00000596940 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
C19orf54-206ENST00000596940 ABCA10Q8WWZ4 1543 aa24.85■■□□□ 1.57
C19orf54-206ENST00000596940 SYNJ2O15056 1496 aa24.84■■□□□ 1.57
C19orf54-206ENST00000596940 SYNJ1O43426 1573 aa24.79■■□□□ 1.56
C19orf54-206ENST00000596940 ARAP1Q96P48 1450 aa24.73■■□□□ 1.55
C19orf54-206ENST00000596940 CLASP1Q7Z460 1538 aa24.72■■□□□ 1.55
C19orf54-206ENST00000596940 TOP2BQ02880 1626 aa24.71■■□□□ 1.55
C19orf54-206ENST00000596940 ABCA5Q8WWZ7 1642 aa24.69■■□□□ 1.54
C19orf54-206ENST00000596940 PBRM1Q86U86 1689 aa24.66■■□□□ 1.54
C19orf54-206ENST00000596940 BIVM-ERCC5R4GMW8 1640 aa24.64■■□□□ 1.54
C19orf54-206ENST00000596940 TRHP20396 242 aaPredicted RBP24.62■■□□□ 1.53
C19orf54-206ENST00000596940 FHAD1B1AJZ9 1412 aa24.6■■□□□ 1.53
C19orf54-206ENST00000596940 GRIN2AQ12879 1464 aa24.59■■□□□ 1.53
C19orf54-206ENST00000596940 ERICH3Q5RHP9 1530 aa24.55■■□□□ 1.52
C19orf54-206ENST00000596940 NUP160Q12769 1436 aa24.52■■□□□ 1.52
C19orf54-206ENST00000596940 ADAMTS12P58397 1594 aa24.51■■□□□ 1.51
C19orf54-206ENST00000596940 CEP170Q5SW79 1584 aa24.41■■□□□ 1.5
C19orf54-206ENST00000596940 KIF27Q86VH2 1401 aa24.36■■□□□ 1.49
C19orf54-206ENST00000596940 JPH4Q96JJ6 628 aa24.36■■□□□ 1.49
C19orf54-206ENST00000596940 IGF1RP08069 1367 aa24.31■■□□□ 1.48
C19orf54-206ENST00000596940 PRG4Q92954 1404 aaPredicted RBP24.3■■□□□ 1.48
C19orf54-206ENST00000596940 ERCC6L2Q5T890 1561 aa24.29■■□□□ 1.48
C19orf54-206ENST00000596940 SHROOM2Q13796 1616 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms