RNA–Protein interactions for RNA: ENST00000443813.6

CDK18-204, Transcript of cyclin dependent kinase 18, humanhuman

TSL 4

Gene CDK18, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-204ENST00000443813 NISCHQ9Y2I1 1504 aa48.19■■■■■ 5.31
CDK18-204ENST00000443813 CCDC180Q9P1Z9 1646 aa43.3■■■■■ 4.52
CDK18-204ENST00000443813 ABCC9O60706 1549 aa43.26■■■■■ 4.52
CDK18-204ENST00000443813 RB1CC1Q8TDY2 1594 aa41.19■■■■■ 4.18
CDK18-204ENST00000443813 NACADO15069 1562 aa40.89■■■■■ 4.14
CDK18-204ENST00000443813 DCAF8L2P0C7V8 631 aa40.66■■■■■ 4.1
CDK18-204ENST00000443813 DNAJC5BQ9UF47 199 aa40.53■■■■■ 4.08
CDK18-204ENST00000443813 UNC13AQ9UPW8 1703 aa40.33■■■■■ 4.05
CDK18-204ENST00000443813 MYO15BQ96JP2 1530 aa40.31■■■■■ 4.04
CDK18-204ENST00000443813 PABPN1Q86U42 306 aaKnown RBP eCLIP40.25■■■■■ 4.03
CDK18-204ENST00000443813 BICRAQ9NZM4 1560 aa39.99■■■■□ 3.99
CDK18-204ENST00000443813 ZCCHC6Q5VYS8 1495 aaKnown RBP39.94■■■■□ 3.98
CDK18-204ENST00000443813 DCAF1Q9Y4B6 1507 aa39.8■■■■□ 3.96
CDK18-204ENST00000443813 SCRIBQ14160 1630 aa39.45■■■■□ 3.91
CDK18-204ENST00000443813 SHROOM4Q9ULL8 1493 aa39.43■■■■□ 3.9
CDK18-204ENST00000443813 CC2D2AQ9P2K1 1620 aa39.09■■■■□ 3.85
CDK18-204ENST00000443813 EIF4G1Q04637 1599 aaKnown RBP39■■■■□ 3.83
CDK18-204ENST00000443813 CECR2Q9BXF3 1484 aa38.96■■■■□ 3.83
CDK18-204ENST00000443813 NCAPD3P42695 1498 aa37.72■■■■□ 3.63
CDK18-204ENST00000443813 SMARCA4P51532 1647 aa37.62■■■■□ 3.61
CDK18-204ENST00000443813 ATAD2BQ9ULI0 1458 aa37.62■■■■□ 3.61
CDK18-204ENST00000443813 SMARCA2P51531 1590 aa37.54■■■■□ 3.6
CDK18-204ENST00000443813 HMGXB3Q12766 1538 aa37.48■■■■□ 3.59
CDK18-204ENST00000443813 BAZ1AQ9NRL2 1556 aaPredicted RBP37.42■■■■□ 3.58
CDK18-204ENST00000443813 ERCC6Q03468 1493 aa37.35■■■■□ 3.57
CDK18-204ENST00000443813 BAZ1BQ9UIG0 1483 aaKnown RBP37.28■■■■□ 3.56
CDK18-204ENST00000443813 CUX2O14529 1486 aa37.27■■■■□ 3.56
CDK18-204ENST00000443813 PEG3Q9GZU2 1588 aa37.24■■■■□ 3.55
CDK18-204ENST00000443813 DNAJC5Q9H3Z4 198 aa37.22■■■■□ 3.55
CDK18-204ENST00000443813 NESP48681 1621 aa37.17■■■■□ 3.54
CDK18-204ENST00000443813 MROH2BQ7Z745 1585 aa37.14■■■■□ 3.54
CDK18-204ENST00000443813 LAMC3Q9Y6N6 1575 aa36.91■■■■□ 3.5
CDK18-204ENST00000443813 THOC2Q8NI27 1593 aaKnown RBP36.81■■■■□ 3.48
CDK18-204ENST00000443813 KIF21AQ7Z4S6 1674 aa36.74■■■■□ 3.47
CDK18-204ENST00000443813 WIZO95785 1651 aa36.73■■■■□ 3.47
CDK18-204ENST00000443813 PDS5BQ9NTI5 1447 aa36.68■■■■□ 3.46
CDK18-204ENST00000443813 CADPSQ9ULU8 1353 aa36.58■■■■□ 3.45
CDK18-204ENST00000443813 MRC2Q9UBG0 1479 aa36.37■■■■□ 3.41
CDK18-204ENST00000443813 RSF1Q96T23 1441 aaPredicted RBP36.35■■■■□ 3.41
CDK18-204ENST00000443813 WDR62O43379 1518 aa36.29■■■■□ 3.4
CDK18-204ENST00000443813 TOP2AP11388 1531 aaKnown RBP36.24■■■■□ 3.39
CDK18-204ENST00000443813 CEP164Q9UPV0 1460 aa36.24■■■■□ 3.39
CDK18-204ENST00000443813 FANCD2Q9BXW9 1451 aa36.18■■■■□ 3.38
CDK18-204ENST00000443813 CFTRP13569 1480 aa36.17■■■■□ 3.38
CDK18-204ENST00000443813 PRDM2Q13029 1718 aa35.91■■■■□ 3.34
CDK18-204ENST00000443813 URB2Q14146 1524 aaKnown RBP35.9■■■■□ 3.34
CDK18-204ENST00000443813 CCDC88BA6NC98 1476 aa35.81■■■■□ 3.32
CDK18-204ENST00000443813 TRIM41Q8WV44 630 aa35.61■■■■□ 3.29
CDK18-204ENST00000443813 OSCARQ8IYS5 282 aa35.54■■■■□ 3.28
CDK18-204ENST00000443813 TOPBP1Q92547 1522 aa35.51■■■■□ 3.27
CDK18-204ENST00000443813 IFT140Q96RY7 1462 aa35.5■■■■□ 3.27
CDK18-204ENST00000443813 ZNF608Q9ULD9 1512 aaPredicted RBP35.45■■■■□ 3.27
CDK18-204ENST00000443813 ABCC8Q09428 1581 aa35.42■■■■□ 3.26
CDK18-204ENST00000443813 DNMBPQ6XZF7 1577 aa35.39■■■■□ 3.26
CDK18-204ENST00000443813 EIF4G3O43432 1585 aaKnown RBP35.29■■■■□ 3.24
CDK18-204ENST00000443813 TARBP1Q13395 1621 aaKnown RBP35.21■■■■□ 3.23
CDK18-204ENST00000443813 RIMBP3CA6NJZ7 1639 aa35.15■■■■□ 3.22
CDK18-204ENST00000443813 RIMBP3BA6NNM3 1639 aa35.15■■■■□ 3.22
CDK18-204ENST00000443813 RIMBP3Q9UFD9 1639 aa35.15■■■■□ 3.22
CDK18-204ENST00000443813 SUPT5HO00267 1087 aaKnown RBP35.15■■■■□ 3.22
CDK18-204ENST00000443813 POLA1P09884 1462 aaPredicted RBP35.14■■■■□ 3.22
CDK18-204ENST00000443813 AQRO60306 1485 aaKnown RBP eCLIP35.12■■■■□ 3.21
CDK18-204ENST00000443813 CHD1O14646 1710 aa35.06■■■■□ 3.2
CDK18-204ENST00000443813 ARHGEF11O15085 1522 aa35.01■■■■□ 3.2
CDK18-204ENST00000443813 RAD54L2Q9Y4B4 1467 aa35.01■■■■□ 3.19
CDK18-204ENST00000443813 SOGA1O94964 1423 aa34.97■■■■□ 3.19
CDK18-204ENST00000443813 FGD5Q6ZNL6 1462 aa34.93■■■■□ 3.18
CDK18-204ENST00000443813 CUX1P39880 1505 aa34.91■■■■□ 3.18
CDK18-204ENST00000443813 TDRD9Q8NDG6 1382 aaKnown RBP34.9■■■■□ 3.18
CDK18-204ENST00000443813 FBLN2P98095 1184 aa34.88■■■■□ 3.17
CDK18-204ENST00000443813 WDR97A6NE52 1622 aa34.85■■■■□ 3.17
CDK18-204ENST00000443813 SNAPC4Q5SXM2 1469 aa34.78■■■■□ 3.16
CDK18-204ENST00000443813 CYB5RLQ6IPT4 315 aa34.72■■■■□ 3.15
CDK18-204ENST00000443813 MAGI1Q96QZ7 1491 aaPredicted RBP34.68■■■■□ 3.14
CDK18-204ENST00000443813 GRIN2BQ13224 1484 aa34.67■■■■□ 3.14
CDK18-204ENST00000443813 ARAP1Q96P48 1450 aa34.67■■■■□ 3.14
CDK18-204ENST00000443813 CHMP7Q8WUX9 453 aaPredicted RBP34.62■■■■□ 3.13
CDK18-204ENST00000443813 PBRM1Q86U86 1689 aa34.61■■■■□ 3.13
CDK18-204ENST00000443813 CLASP1Q7Z460 1538 aa34.6■■■■□ 3.13
CDK18-204ENST00000443813 SYNJ1O43426 1573 aa34.59■■■■□ 3.13
CDK18-204ENST00000443813 SYNJ2O15056 1496 aa34.56■■■■□ 3.12
CDK18-204ENST00000443813 GAPVD1Q14C86 1478 aa34.56■■■■□ 3.12
CDK18-204ENST00000443813 ABCA10Q8WWZ4 1543 aa34.52■■■■□ 3.12
CDK18-204ENST00000443813 ABCA5Q8WWZ7 1642 aa34.5■■■■□ 3.11
CDK18-204ENST00000443813 WRNQ14191 1432 aaPredicted RBP eCLIP34.38■■■■□ 3.09
CDK18-204ENST00000443813 BIVM-ERCC5R4GMW8 1640 aa34.37■■■■□ 3.09
CDK18-204ENST00000443813 TOP2BQ02880 1626 aa34.35■■■■□ 3.09
CDK18-204ENST00000443813 TRHP20396 242 aaPredicted RBP34.35■■■■□ 3.09
CDK18-204ENST00000443813 ADAMTS12P58397 1594 aa34.25■■■■□ 3.07
CDK18-204ENST00000443813 GRIN2AQ12879 1464 aa34.24■■■■□ 3.07
CDK18-204ENST00000443813 CEP170Q5SW79 1584 aa34.13■■■■□ 3.05
CDK18-204ENST00000443813 FHAD1B1AJZ9 1412 aa34.11■■■■□ 3.05
CDK18-204ENST00000443813 NUP160Q12769 1436 aa34.11■■■■□ 3.05
CDK18-204ENST00000443813 ERICH3Q5RHP9 1530 aa34.09■■■■□ 3.05
CDK18-204ENST00000443813 ERCC6L2Q5T890 1561 aa34.07■■■■□ 3.05
CDK18-204ENST00000443813 SHROOM2Q13796 1616 aa34■■■■□ 3.03
CDK18-204ENST00000443813 PRG4Q92954 1404 aaPredicted RBP33.79■■■■□ 3
CDK18-204ENST00000443813 RUSC2Q8N2Y8 1516 aa33.76■■■■□ 3
CDK18-204ENST00000443813 JPH4Q96JJ6 628 aa33.73■■■□□ 2.99
CDK18-204ENST00000443813 KIF27Q86VH2 1401 aa33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms