RNA–Protein interactions for RNA: ENST00000467719.5

SLC22A18-208, Transcript of solute carrier family 22 member 18, humanhuman

TSL 1 (best)

Gene SLC22A18, Length 2,635 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A18-208ENST00000467719 NISCHQ9Y2I1 1504 aa40.93■■■■■ 4.14
SLC22A18-208ENST00000467719 SHROOM4Q9ULL8 1493 aa35.1■■■■□ 3.21
SLC22A18-208ENST00000467719 ZCCHC6Q5VYS8 1495 aaKnown RBP34.69■■■■□ 3.14
SLC22A18-208ENST00000467719 CCDC180Q9P1Z9 1646 aa34.62■■■■□ 3.13
SLC22A18-208ENST00000467719 SUPT5HO00267 1087 aaKnown RBP34.58■■■■□ 3.13
SLC22A18-208ENST00000467719 DCAF8L2P0C7V8 631 aa33.82■■■■□ 3
SLC22A18-208ENST00000467719 CHIC1Q5VXU3 224 aa33.81■■■■□ 3
SLC22A18-208ENST00000467719 MYO15BQ96JP2 1530 aa33.75■■■□□ 2.99
SLC22A18-208ENST00000467719 DCAF1Q9Y4B6 1507 aa33.59■■■□□ 2.97
SLC22A18-208ENST00000467719 HRCP23327 699 aa33.3■■■□□ 2.92
SLC22A18-208ENST00000467719 PCGF6Q9BYE7 350 aa33.05■■■□□ 2.88
SLC22A18-208ENST00000467719 LOC105371045A0A1W2PR82 267 aa32.81■■■□□ 2.84
SLC22A18-208ENST00000467719 ABCC9O60706 1549 aa32.78■■■□□ 2.84
SLC22A18-208ENST00000467719 RSF1Q96T23 1441 aaPredicted RBP32.53■■■□□ 2.8
SLC22A18-208ENST00000467719 PPARGC1BQ86YN6 1023 aaKnown RBP32.53■■■□□ 2.8
SLC22A18-208ENST00000467719 SCRIBQ14160 1630 aa32.5■■■□□ 2.79
SLC22A18-208ENST00000467719 TRIM26Q12899 539 aaPredicted RBP32.37■■■□□ 2.77
SLC22A18-208ENST00000467719 RB1CC1Q8TDY2 1594 aa32.21■■■□□ 2.75
SLC22A18-208ENST00000467719 TRIM41Q8WV44 630 aa32.2■■■□□ 2.74
SLC22A18-208ENST00000467719 NACADO15069 1562 aa31.96■■■□□ 2.71
SLC22A18-208ENST00000467719 FAM9AQ8IZU1 332 aaPredicted RBP31.93■■■□□ 2.7
SLC22A18-208ENST00000467719 CECR2Q9BXF3 1484 aa31.92■■■□□ 2.7
SLC22A18-208ENST00000467719 MROH2BQ7Z745 1585 aa31.84■■■□□ 2.69
SLC22A18-208ENST00000467719 ZEB1P37275 1124 aaPredicted RBP31.8■■■□□ 2.68
SLC22A18-208ENST00000467719 WIZO95785 1651 aa31.67■■■□□ 2.66
SLC22A18-208ENST00000467719 EHMT2Q96KQ7 1210 aa31.62■■■□□ 2.65
SLC22A18-208ENST00000467719 BAZ1AQ9NRL2 1556 aaPredicted RBP31.5■■■□□ 2.63
SLC22A18-208ENST00000467719 EIF4G1Q04637 1599 aaKnown RBP31.4■■■□□ 2.62
SLC22A18-208ENST00000467719 TOP2AP11388 1531 aaKnown RBP31.18■■■□□ 2.58
SLC22A18-208ENST00000467719 SMARCA4P51532 1647 aa31.1■■■□□ 2.57
SLC22A18-208ENST00000467719 ABCC8Q09428 1581 aa31.08■■■□□ 2.57
SLC22A18-208ENST00000467719 CCDC88BA6NC98 1476 aa31.08■■■□□ 2.57
SLC22A18-208ENST00000467719 SMARCA2P51531 1590 aa31.03■■■□□ 2.56
SLC22A18-208ENST00000467719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31■■■□□ 2.55
SLC22A18-208ENST00000467719 WRNQ14191 1432 aaPredicted RBP eCLIP30.95■■■□□ 2.54
SLC22A18-208ENST00000467719 CCER1Q8TC90 406 aaPredicted RBP30.94■■■□□ 2.54
SLC22A18-208ENST00000467719 UNC13AQ9UPW8 1703 aa30.91■■■□□ 2.54
SLC22A18-208ENST00000467719 SOGA1O94964 1423 aa30.87■■■□□ 2.53
SLC22A18-208ENST00000467719 CEP162Q5TB80 1403 aa30.87■■■□□ 2.53
SLC22A18-208ENST00000467719 SCAF1Q9H7N4 1312 aaKnown RBP30.86■■■□□ 2.53
SLC22A18-208ENST00000467719 TNIKQ9UKE5 1360 aa30.82■■■□□ 2.52
SLC22A18-208ENST00000467719 EEA1Q15075 1411 aa30.77■■■□□ 2.52
SLC22A18-208ENST00000467719 CSRNP3Q8WYN3 585 aa30.74■■■□□ 2.51
SLC22A18-208ENST00000467719 RUSC2Q8N2Y8 1516 aa30.7■■■□□ 2.51
SLC22A18-208ENST00000467719 TTBK1Q5TCY1 1321 aaPredicted RBP30.69■■■□□ 2.5
SLC22A18-208ENST00000467719 UBTFP17480 764 aaKnown RBP30.61■■■□□ 2.49
SLC22A18-208ENST00000467719 PELP1Q8IZL8 1130 aaKnown RBP30.57■■■□□ 2.48
SLC22A18-208ENST00000467719 GOLGA3Q08378 1498 aa30.57■■■□□ 2.48
SLC22A18-208ENST00000467719 BICRAQ9NZM4 1560 aa30.53■■■□□ 2.48
SLC22A18-208ENST00000467719 DIEXFQ68CQ4 756 aaKnown RBP30.51■■■□□ 2.48
SLC22A18-208ENST00000467719 PABPN1Q86U42 306 aaKnown RBP eCLIP30.51■■■□□ 2.48
SLC22A18-208ENST00000467719 PEG3Q9GZU2 1588 aa30.5■■■□□ 2.47
SLC22A18-208ENST00000467719 ACIN1Q9UKV3 1341 aaKnown RBP30.47■■■□□ 2.47
SLC22A18-208ENST00000467719 NEUROD1Q13562 356 aa30.41■■■□□ 2.46
SLC22A18-208ENST00000467719 SYNJ1O43426 1573 aa30.36■■■□□ 2.45
SLC22A18-208ENST00000467719 CEP164Q9UPV0 1460 aa30.36■■■□□ 2.45
SLC22A18-208ENST00000467719 KIF21BO75037 1637 aa30.32■■■□□ 2.44
SLC22A18-208ENST00000467719 ATAD2BQ9ULI0 1458 aa30.24■■■□□ 2.43
SLC22A18-208ENST00000467719 CENPBP07199 599 aaPredicted RBP30.24■■■□□ 2.43
SLC22A18-208ENST00000467719 CLIP1P30622 1438 aa30.23■■■□□ 2.43
SLC22A18-208ENST00000467719 ZNF316A6NFI3 1004 aaPredicted RBP30.22■■■□□ 2.43
SLC22A18-208ENST00000467719 BAZ1BQ9UIG0 1483 aaKnown RBP30.16■■■□□ 2.42
SLC22A18-208ENST00000467719 VPS8Q8N3P4 1428 aa30.15■■■□□ 2.42
SLC22A18-208ENST00000467719 HNRNPUL2Q1KMD3 747 aaKnown RBP30.12■■■□□ 2.41
SLC22A18-208ENST00000467719 GTF3C3Q9Y5Q9 886 aa30.12■■■□□ 2.41
SLC22A18-208ENST00000467719 RAPGEF2Q9Y4G8 1499 aa30.1■■■□□ 2.41
SLC22A18-208ENST00000467719 APLP2Q06481 763 aa30■■■□□ 2.39
SLC22A18-208ENST00000467719 TOP2BQ02880 1626 aa29.97■■■□□ 2.39
SLC22A18-208ENST00000467719 RANGAP1P46060 587 aaPredicted RBP29.9■■■□□ 2.38
SLC22A18-208ENST00000467719 BIVM-ERCC5R4GMW8 1640 aa29.85■■■□□ 2.37
SLC22A18-208ENST00000467719 MIER1Q8N108 512 aa29.82■■■□□ 2.36
SLC22A18-208ENST00000467719 ERICH3Q5RHP9 1530 aa29.79■■■□□ 2.36
SLC22A18-208ENST00000467719 PRXQ9BXM0 1461 aa29.79■■■□□ 2.36
SLC22A18-208ENST00000467719 YTHDC1Q96MU7 727 aaKnown RBP29.77■■■□□ 2.36
SLC22A18-208ENST00000467719 ARAP1Q96P48 1450 aa29.71■■■□□ 2.35
SLC22A18-208ENST00000467719 CLSPNQ9HAW4 1339 aa29.66■■■□□ 2.34
SLC22A18-208ENST00000467719 DHX57Q6P158 1386 aaKnown RBP29.62■■■□□ 2.33
SLC22A18-208ENST00000467719 CUX1P39880 1505 aa29.62■■■□□ 2.33
SLC22A18-208ENST00000467719 KANK4Q5T7N3 995 aaPredicted RBP29.61■■■□□ 2.33
SLC22A18-208ENST00000467719 NCAPD3P42695 1498 aa29.6■■■□□ 2.33
SLC22A18-208ENST00000467719 HMGXB3Q12766 1538 aa29.6■■■□□ 2.33
SLC22A18-208ENST00000467719 KIF27Q86VH2 1401 aa29.56■■■□□ 2.32
SLC22A18-208ENST00000467719 RRBP1Q9P2E9 1410 aaKnown RBP29.51■■■□□ 2.31
SLC22A18-208ENST00000467719 CFTRP13569 1480 aa29.46■■■□□ 2.31
SLC22A18-208ENST00000467719 ARHGAP35Q9NRY4 1499 aa29.42■■■□□ 2.3
SLC22A18-208ENST00000467719 CUX2O14529 1486 aa29.39■■■□□ 2.29
SLC22A18-208ENST00000467719 CCNB3Q8WWL7 1395 aa29.36■■■□□ 2.29
SLC22A18-208ENST00000467719 IGF1RP08069 1367 aa29.23■■■□□ 2.27
SLC22A18-208ENST00000467719 ITGAEP38570 1179 aa29.19■■■□□ 2.26
SLC22A18-208ENST00000467719 PRDM2Q13029 1718 aa29.18■■■□□ 2.26
SLC22A18-208ENST00000467719 MAP3K1Q13233 1512 aa29.15■■■□□ 2.26
SLC22A18-208ENST00000467719 TIAM1Q13009 1591 aa29.14■■■□□ 2.25
SLC22A18-208ENST00000467719 RAB3GAP2Q9H2M9 1393 aa29.13■■■□□ 2.25
SLC22A18-208ENST00000467719 CARMIL1Q5VZK9 1371 aa29.1■■■□□ 2.25
SLC22A18-208ENST00000467719 MAPKBP1O60336 1514 aa29.07■■■□□ 2.24
SLC22A18-208ENST00000467719 MYT1Q01538 1121 aa29.07■■■□□ 2.24
SLC22A18-208ENST00000467719 CADPSQ9ULU8 1353 aa29.06■■■□□ 2.24
SLC22A18-208ENST00000467719 FGD5Q6ZNL6 1462 aa29.04■■■□□ 2.24
SLC22A18-208ENST00000467719 LRRC9Q6ZRR7 1453 aa29.04■■■□□ 2.24
SLC22A18-208ENST00000467719 SETD5Q9C0A6 1442 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms