RNA–Protein interactions for RNA: ENST00000480108.1

MMS19-216, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, humanhuman

TSL 2

Gene MMS19, Length 677 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMS19-216ENST00000480108 NISCHQ9Y2I1 1504 aa30.17■■■□□ 2.42
MMS19-216ENST00000480108 ABCC9O60706 1549 aa28.96■■■□□ 2.23
MMS19-216ENST00000480108 DNAJC5BQ9UF47 199 aa28.28■■■□□ 2.12
MMS19-216ENST00000480108 CCDC180Q9P1Z9 1646 aa27.63■■■□□ 2.01
MMS19-216ENST00000480108 RB1CC1Q8TDY2 1594 aa26.97■■□□□ 1.91
MMS19-216ENST00000480108 DNAJC5Q9H3Z4 198 aa26.92■■□□□ 1.9
MMS19-216ENST00000480108 PABPN1Q86U42 306 aaKnown RBP eCLIP26.78■■□□□ 1.88
MMS19-216ENST00000480108 NACADO15069 1562 aa26.43■■□□□ 1.82
MMS19-216ENST00000480108 UNC13AQ9UPW8 1703 aa26.37■■□□□ 1.81
MMS19-216ENST00000480108 DCAF8L2P0C7V8 631 aa26.3■■□□□ 1.8
MMS19-216ENST00000480108 CECR2Q9BXF3 1484 aa26.2■■□□□ 1.78
MMS19-216ENST00000480108 BICRAQ9NZM4 1560 aa26.19■■□□□ 1.78
MMS19-216ENST00000480108 CC2D2AQ9P2K1 1620 aa26.07■■□□□ 1.76
MMS19-216ENST00000480108 EIF4G1Q04637 1599 aaKnown RBP25.67■■□□□ 1.7
MMS19-216ENST00000480108 SHROOM4Q9ULL8 1493 aa25.64■■□□□ 1.69
MMS19-216ENST00000480108 MYO15BQ96JP2 1530 aa25.57■■□□□ 1.68
MMS19-216ENST00000480108 CUX2O14529 1486 aa25.43■■□□□ 1.66
MMS19-216ENST00000480108 TRIM41Q8WV44 630 aa25.31■■□□□ 1.64
MMS19-216ENST00000480108 SCRIBQ14160 1630 aa25.16■■□□□ 1.62
MMS19-216ENST00000480108 ERCC6Q03468 1493 aa25.11■■□□□ 1.61
MMS19-216ENST00000480108 DCAF1Q9Y4B6 1507 aa24.79■■□□□ 1.56
MMS19-216ENST00000480108 ZCCHC6Q5VYS8 1495 aaKnown RBP24.7■■□□□ 1.55
MMS19-216ENST00000480108 NESP48681 1621 aa24.49■■□□□ 1.51
MMS19-216ENST00000480108 THOC2Q8NI27 1593 aaKnown RBP24.46■■□□□ 1.51
MMS19-216ENST00000480108 NCAPD3P42695 1498 aa24.4■■□□□ 1.5
MMS19-216ENST00000480108 SMARCA2P51531 1590 aa24.27■■□□□ 1.48
MMS19-216ENST00000480108 ATAD2BQ9ULI0 1458 aa24.16■■□□□ 1.46
MMS19-216ENST00000480108 AEBP2Q6ZN18 517 aaPredicted RBP24.16■■□□□ 1.46
MMS19-216ENST00000480108 KIF21AQ7Z4S6 1674 aa24.15■■□□□ 1.46
MMS19-216ENST00000480108 BAZ1AQ9NRL2 1556 aaPredicted RBP24.13■■□□□ 1.45
MMS19-216ENST00000480108 OSCARQ8IYS5 282 aa24.12■■□□□ 1.45
MMS19-216ENST00000480108 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
MMS19-216ENST00000480108 LAMC3Q9Y6N6 1575 aa24.09■■□□□ 1.45
MMS19-216ENST00000480108 PDS5BQ9NTI5 1447 aa24.01■■□□□ 1.43
MMS19-216ENST00000480108 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
MMS19-216ENST00000480108 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
MMS19-216ENST00000480108 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
MMS19-216ENST00000480108 BAZ1BQ9UIG0 1483 aaKnown RBP23.89■■□□□ 1.42
MMS19-216ENST00000480108 TRHP20396 242 aaPredicted RBP23.89■■□□□ 1.41
MMS19-216ENST00000480108 MRC2Q9UBG0 1479 aa23.87■■□□□ 1.41
MMS19-216ENST00000480108 SMARCA4P51532 1647 aa23.83■■□□□ 1.41
MMS19-216ENST00000480108 WDR62O43379 1518 aa23.83■■□□□ 1.41
MMS19-216ENST00000480108 ARHGEF11O15085 1522 aa23.7■■□□□ 1.38
MMS19-216ENST00000480108 CYB5RLQ6IPT4 315 aa23.68■■□□□ 1.38
MMS19-216ENST00000480108 CADPSQ9ULU8 1353 aa23.63■■□□□ 1.37
MMS19-216ENST00000480108 PEG3Q9GZU2 1588 aa23.55■■□□□ 1.36
MMS19-216ENST00000480108 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
MMS19-216ENST00000480108 FANCD2Q9BXW9 1451 aa23.38■■□□□ 1.33
MMS19-216ENST00000480108 ARAP1Q96P48 1450 aa23.36■■□□□ 1.33
MMS19-216ENST00000480108 ILDR1Q86SU0 546 aaPredicted RBP23.29■■□□□ 1.32
MMS19-216ENST00000480108 URB2Q14146 1524 aaKnown RBP23.25■■□□□ 1.31
MMS19-216ENST00000480108 MROH2BQ7Z745 1585 aa23.25■■□□□ 1.31
MMS19-216ENST00000480108 ZNF608Q9ULD9 1512 aaPredicted RBP23.19■■□□□ 1.3
MMS19-216ENST00000480108 CHD1O14646 1710 aa23.11■■□□□ 1.29
MMS19-216ENST00000480108 RSF1Q96T23 1441 aaPredicted RBP23.11■■□□□ 1.29
MMS19-216ENST00000480108 IFT140Q96RY7 1462 aa23.09■■□□□ 1.29
MMS19-216ENST00000480108 CFTRP13569 1480 aa23.06■■□□□ 1.28
MMS19-216ENST00000480108 FBLN2P98095 1184 aa23.06■■□□□ 1.28
MMS19-216ENST00000480108 EIF4G3O43432 1585 aaKnown RBP23■■□□□ 1.27
MMS19-216ENST00000480108 WIZO95785 1651 aa22.95■■□□□ 1.26
MMS19-216ENST00000480108 AQRO60306 1485 aaKnown RBP eCLIP22.85■■□□□ 1.251e-8■□□□□ 10.7
MMS19-216ENST00000480108 TOPBP1Q92547 1522 aa22.78■■□□□ 1.24
MMS19-216ENST00000480108 PRDM2Q13029 1718 aa22.78■■□□□ 1.24
MMS19-216ENST00000480108 CLASP1Q7Z460 1538 aa22.74■■□□□ 1.23
MMS19-216ENST00000480108 TARBP1Q13395 1621 aaKnown RBP22.67■■□□□ 1.22
MMS19-216ENST00000480108 SYNJ1O43426 1573 aa22.66■■□□□ 1.22
MMS19-216ENST00000480108 GAPVD1Q14C86 1478 aa22.66■■□□□ 1.22
MMS19-216ENST00000480108 ABCC8Q09428 1581 aa22.64■■□□□ 1.22
MMS19-216ENST00000480108 CHMP7Q8WUX9 453 aaPredicted RBP22.63■■□□□ 1.21
MMS19-216ENST00000480108 KDM4FA0A1W2PPD8 638 aa22.62■■□□□ 1.21
MMS19-216ENST00000480108 DNMBPQ6XZF7 1577 aa22.59■■□□□ 1.21
MMS19-216ENST00000480108 SNAPC4Q5SXM2 1469 aa22.55■■□□□ 1.2
MMS19-216ENST00000480108 TOP2AP11388 1531 aaKnown RBP22.52■■□□□ 1.19
MMS19-216ENST00000480108 KIF13AQ9H1H9 1805 aa22.51■■□□□ 1.19
MMS19-216ENST00000480108 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
MMS19-216ENST00000480108 POLA1P09884 1462 aaPredicted RBP22.46■■□□□ 1.19
MMS19-216ENST00000480108 RAD54L2Q9Y4B4 1467 aa22.44■■□□□ 1.18
MMS19-216ENST00000480108 MAGI1Q96QZ7 1491 aaPredicted RBP22.41■■□□□ 1.18
MMS19-216ENST00000480108 SOGA1O94964 1423 aa22.38■■□□□ 1.17
MMS19-216ENST00000480108 SYNJ2O15056 1496 aa22.37■■□□□ 1.17
MMS19-216ENST00000480108 ERCC6L2Q5T890 1561 aa22.33■■□□□ 1.17
MMS19-216ENST00000480108 WDR97A6NE52 1622 aa22.31■■□□□ 1.16
MMS19-216ENST00000480108 CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
MMS19-216ENST00000480108 GRIN2BQ13224 1484 aa22.3■■□□□ 1.16
MMS19-216ENST00000480108 FAM69CQ0P6D2 419 aa22.29■■□□□ 1.16
MMS19-216ENST00000480108 KDM6BO15054 1643 aa22.28■■□□□ 1.16
MMS19-216ENST00000480108 FBXO41Q8TF61 875 aa22.25■■□□□ 1.15
MMS19-216ENST00000480108 HECW2Q9P2P5 1572 aa22.25■■□□□ 1.15
MMS19-216ENST00000480108 ABCC10Q5T3U5 1492 aa22.17■■□□□ 1.14
MMS19-216ENST00000480108 CEP170Q5SW79 1584 aa22.16■■□□□ 1.14
MMS19-216ENST00000480108 PBRM1Q86U86 1689 aa22.16■■□□□ 1.14
MMS19-216ENST00000480108 FGD5Q6ZNL6 1462 aa22.15■■□□□ 1.14
MMS19-216ENST00000480108 ADGRL1O94910 1474 aa22.12■■□□□ 1.13
MMS19-216ENST00000480108 TSPOAP1O95153 1857 aa22.1■■□□□ 1.13
MMS19-216ENST00000480108 NPM1P06748 294 aaKnown RBP eCLIP22.1■■□□□ 1.13
MMS19-216ENST00000480108 DIP2BQ9P265 1576 aa22.08■■□□□ 1.13
MMS19-216ENST00000480108 LMTK3Q96Q04 1460 aa22.08■■□□□ 1.12
MMS19-216ENST00000480108 SHROOM2Q13796 1616 aa22.01■■□□□ 1.11
MMS19-216ENST00000480108 GRIN2AQ12879 1464 aa22.01■■□□□ 1.11
MMS19-216ENST00000480108 MAPKBP1O60336 1514 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms