RNA–Protein interactions for RNA: ENST00000477043.5

FAM208B-206, Transcript of family with sequence similarity 208 member B, humanhuman

TSL 2

Gene FAM208B, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208B-206ENST00000477043 NISCHQ9Y2I1 1504 aa40.16■■■■■ 4.02
FAM208B-206ENST00000477043 ABCC9O60706 1549 aa36.64■■■■□ 3.46
FAM208B-206ENST00000477043 CCDC180Q9P1Z9 1646 aa35.95■■■■□ 3.35
FAM208B-206ENST00000477043 DNAJC5BQ9UF47 199 aa35.01■■■■□ 3.2
FAM208B-206ENST00000477043 RB1CC1Q8TDY2 1594 aa34.53■■■■□ 3.12
FAM208B-206ENST00000477043 NACADO15069 1562 aa34.17■■■■□ 3.06
FAM208B-206ENST00000477043 DCAF8L2P0C7V8 631 aa34.12■■■■□ 3.05
FAM208B-206ENST00000477043 PABPN1Q86U42 306 aaKnown RBP eCLIP34.09■■■■□ 3.05
FAM208B-206ENST00000477043 UNC13AQ9UPW8 1703 aa33.8■■■■□ 3
FAM208B-206ENST00000477043 BICRAQ9NZM4 1560 aa33.64■■■□□ 2.98
FAM208B-206ENST00000477043 MYO15BQ96JP2 1530 aa33.48■■■□□ 2.95
FAM208B-206ENST00000477043 ZCCHC6Q5VYS8 1495 aaKnown RBP33.33■■■□□ 2.93
FAM208B-206ENST00000477043 DCAF1Q9Y4B6 1507 aa33.19■■■□□ 2.9
FAM208B-206ENST00000477043 CECR2Q9BXF3 1484 aa33.05■■■□□ 2.88
FAM208B-206ENST00000477043 CC2D2AQ9P2K1 1620 aa33.03■■■□□ 2.88
FAM208B-206ENST00000477043 SHROOM4Q9ULL8 1493 aa32.98■■■□□ 2.87
FAM208B-206ENST00000477043 EIF4G1Q04637 1599 aaKnown RBP32.81■■■□□ 2.84
FAM208B-206ENST00000477043 SCRIBQ14160 1630 aa32.8■■■□□ 2.84
FAM208B-206ENST00000477043 DNAJC5Q9H3Z4 198 aa32.49■■■□□ 2.79
FAM208B-206ENST00000477043 CUX2O14529 1486 aa31.74■■■□□ 2.67
FAM208B-206ENST00000477043 ERCC6Q03468 1493 aa31.62■■■□□ 2.65
FAM208B-206ENST00000477043 NCAPD3P42695 1498 aa31.6■■■□□ 2.65
FAM208B-206ENST00000477043 ATAD2BQ9ULI0 1458 aa31.43■■■□□ 2.62
FAM208B-206ENST00000477043 NESP48681 1621 aa31.34■■■□□ 2.61
FAM208B-206ENST00000477043 HMGXB3Q12766 1538 aa31.25■■■□□ 2.59
FAM208B-206ENST00000477043 SMARCA2P51531 1590 aa31.25■■■□□ 2.59
FAM208B-206ENST00000477043 BAZ1AQ9NRL2 1556 aaPredicted RBP31.22■■■□□ 2.59
FAM208B-206ENST00000477043 SMARCA4P51532 1647 aa31.22■■■□□ 2.59
FAM208B-206ENST00000477043 BAZ1BQ9UIG0 1483 aaKnown RBP31.06■■■□□ 2.56
FAM208B-206ENST00000477043 THOC2Q8NI27 1593 aaKnown RBP31.05■■■□□ 2.56
FAM208B-206ENST00000477043 LAMC3Q9Y6N6 1575 aa30.92■■■□□ 2.54
FAM208B-206ENST00000477043 PEG3Q9GZU2 1588 aa30.89■■■□□ 2.54
FAM208B-206ENST00000477043 MROH2BQ7Z745 1585 aa30.88■■■□□ 2.53
FAM208B-206ENST00000477043 KIF21AQ7Z4S6 1674 aa30.85■■■□□ 2.53
FAM208B-206ENST00000477043 TRIM41Q8WV44 630 aa30.84■■■□□ 2.53
FAM208B-206ENST00000477043 PDS5BQ9NTI5 1447 aa30.79■■■□□ 2.52
FAM208B-206ENST00000477043 CADPSQ9ULU8 1353 aa30.62■■■□□ 2.49
FAM208B-206ENST00000477043 MRC2Q9UBG0 1479 aa30.57■■■□□ 2.48
FAM208B-206ENST00000477043 RSF1Q96T23 1441 aaPredicted RBP30.53■■■□□ 2.48
FAM208B-206ENST00000477043 WIZO95785 1651 aa30.52■■■□□ 2.48
FAM208B-206ENST00000477043 WDR62O43379 1518 aa30.49■■■□□ 2.47
FAM208B-206ENST00000477043 CEP164Q9UPV0 1460 aa30.31■■■□□ 2.44
FAM208B-206ENST00000477043 OSCARQ8IYS5 282 aa30.27■■■□□ 2.44
FAM208B-206ENST00000477043 TOP2AP11388 1531 aaKnown RBP30.27■■■□□ 2.44
FAM208B-206ENST00000477043 FANCD2Q9BXW9 1451 aa30.26■■■□□ 2.44
FAM208B-206ENST00000477043 CFTRP13569 1480 aa30.13■■■□□ 2.41
FAM208B-206ENST00000477043 URB2Q14146 1524 aaKnown RBP30.07■■■□□ 2.4
FAM208B-206ENST00000477043 CCDC88BA6NC98 1476 aa29.93■■■□□ 2.38
FAM208B-206ENST00000477043 SUPT5HO00267 1087 aaKnown RBP29.93■■■□□ 2.38
FAM208B-206ENST00000477043 RIMBP3CA6NJZ7 1639 aa29.91■■■□□ 2.38
FAM208B-206ENST00000477043 RIMBP3BA6NNM3 1639 aa29.91■■■□□ 2.38
FAM208B-206ENST00000477043 RIMBP3Q9UFD9 1639 aa29.91■■■□□ 2.38
FAM208B-206ENST00000477043 ZNF608Q9ULD9 1512 aaPredicted RBP29.81■■■□□ 2.36
FAM208B-206ENST00000477043 ARHGEF11O15085 1522 aa29.75■■■□□ 2.35
FAM208B-206ENST00000477043 IFT140Q96RY7 1462 aa29.74■■■□□ 2.35
FAM208B-206ENST00000477043 PRDM2Q13029 1718 aa29.71■■■□□ 2.35
FAM208B-206ENST00000477043 CYB5RLQ6IPT4 315 aa29.65■■■□□ 2.34
FAM208B-206ENST00000477043 TOPBP1Q92547 1522 aa29.63■■■□□ 2.33
FAM208B-206ENST00000477043 ABCC8Q09428 1581 aa29.55■■■□□ 2.32
FAM208B-206ENST00000477043 EIF4G3O43432 1585 aaKnown RBP29.54■■■□□ 2.32
FAM208B-206ENST00000477043 AQRO60306 1485 aaKnown RBP eCLIP29.48■■■□□ 2.31
FAM208B-206ENST00000477043 TRHP20396 242 aaPredicted RBP29.48■■■□□ 2.31
FAM208B-206ENST00000477043 CHD1O14646 1710 aa29.45■■■□□ 2.31
FAM208B-206ENST00000477043 ARAP1Q96P48 1450 aa29.44■■■□□ 2.3
FAM208B-206ENST00000477043 DNMBPQ6XZF7 1577 aa29.43■■■□□ 2.3
FAM208B-206ENST00000477043 FBLN2P98095 1184 aa29.41■■■□□ 2.3
FAM208B-206ENST00000477043 TARBP1Q13395 1621 aaKnown RBP29.41■■■□□ 2.3
FAM208B-206ENST00000477043 POLA1P09884 1462 aaPredicted RBP29.29■■■□□ 2.28
FAM208B-206ENST00000477043 RAD54L2Q9Y4B4 1467 aa29.24■■■□□ 2.27
FAM208B-206ENST00000477043 TDRD9Q8NDG6 1382 aaKnown RBP29.22■■■□□ 2.27
FAM208B-206ENST00000477043 SOGA1O94964 1423 aa29.17■■■□□ 2.26
FAM208B-206ENST00000477043 SNAPC4Q5SXM2 1469 aa29.11■■■□□ 2.25
FAM208B-206ENST00000477043 CLASP1Q7Z460 1538 aa29.1■■■□□ 2.25
FAM208B-206ENST00000477043 CHMP7Q8WUX9 453 aaPredicted RBP29.07■■■□□ 2.24
FAM208B-206ENST00000477043 FGD5Q6ZNL6 1462 aa29.03■■■□□ 2.24
FAM208B-206ENST00000477043 AEBP2Q6ZN18 517 aaPredicted RBP29.01■■■□□ 2.23
FAM208B-206ENST00000477043 SYNJ1O43426 1573 aa29■■■□□ 2.23
FAM208B-206ENST00000477043 CUX1P39880 1505 aa28.99■■■□□ 2.23
FAM208B-206ENST00000477043 MAGI1Q96QZ7 1491 aaPredicted RBP28.97■■■□□ 2.23
FAM208B-206ENST00000477043 WDR97A6NE52 1622 aa28.96■■■□□ 2.23
FAM208B-206ENST00000477043 GRIN2BQ13224 1484 aa28.94■■■□□ 2.22
FAM208B-206ENST00000477043 WRNQ14191 1432 aaPredicted RBP eCLIP28.92■■■□□ 2.22
FAM208B-206ENST00000477043 SYNJ2O15056 1496 aa28.91■■■□□ 2.22
FAM208B-206ENST00000477043 GAPVD1Q14C86 1478 aa28.85■■■□□ 2.21
FAM208B-206ENST00000477043 PBRM1Q86U86 1689 aa28.76■■■□□ 2.19
FAM208B-206ENST00000477043 TOP2BQ02880 1626 aa28.72■■■□□ 2.19
FAM208B-206ENST00000477043 ABCA10Q8WWZ4 1543 aa28.72■■■□□ 2.19
FAM208B-206ENST00000477043 ERCC6L2Q5T890 1561 aa28.68■■■□□ 2.18
FAM208B-206ENST00000477043 BIVM-ERCC5R4GMW8 1640 aa28.66■■■□□ 2.18
FAM208B-206ENST00000477043 ABCA5Q8WWZ7 1642 aa28.64■■■□□ 2.18
FAM208B-206ENST00000477043 GRIN2AQ12879 1464 aa28.57■■■□□ 2.16
FAM208B-206ENST00000477043 CEP170Q5SW79 1584 aa28.53■■■□□ 2.16
FAM208B-206ENST00000477043 NUP160Q12769 1436 aa28.52■■■□□ 2.16
FAM208B-206ENST00000477043 ADAMTS12P58397 1594 aa28.45■■■□□ 2.15
FAM208B-206ENST00000477043 SHROOM2Q13796 1616 aa28.42■■■□□ 2.14
FAM208B-206ENST00000477043 FHAD1B1AJZ9 1412 aa28.42■■■□□ 2.14
FAM208B-206ENST00000477043 KIF27Q86VH2 1401 aa28.42■■■□□ 2.14
FAM208B-206ENST00000477043 ERICH3Q5RHP9 1530 aa28.4■■■□□ 2.14
FAM208B-206ENST00000477043 KIF13AQ9H1H9 1805 aa28.39■■■□□ 2.13
FAM208B-206ENST00000477043 PRG4Q92954 1404 aaPredicted RBP28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms