RNA–Protein interactions for RNA: ENST00000598485.6

C19orf54-209, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 5 BASIC

Gene C19orf54, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-209ENST00000598485 NISCHQ9Y2I1 1504 aa27.42■■□□□ 1.98
C19orf54-209ENST00000598485 CCDC180Q9P1Z9 1646 aa24.5■■□□□ 1.51
C19orf54-209ENST00000598485 ABCC9O60706 1549 aa24.45■■□□□ 1.51
C19orf54-209ENST00000598485 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
C19orf54-209ENST00000598485 RB1CC1Q8TDY2 1594 aa23.31■■□□□ 1.32
C19orf54-209ENST00000598485 NACADO15069 1562 aa23.15■■□□□ 1.3
C19orf54-209ENST00000598485 PABPN1Q86U42 306 aaKnown RBP eCLIP22.85■■□□□ 1.25
C19orf54-209ENST00000598485 MYO15BQ96JP2 1530 aa22.81■■□□□ 1.24
C19orf54-209ENST00000598485 DNAJC5BQ9UF47 199 aa22.75■■□□□ 1.23
C19orf54-209ENST00000598485 ZCCHC6Q5VYS8 1495 aaKnown RBP22.73■■□□□ 1.23
C19orf54-209ENST00000598485 UNC13AQ9UPW8 1703 aa22.72■■□□□ 1.23
C19orf54-209ENST00000598485 DCAF1Q9Y4B6 1507 aa22.59■■□□□ 1.21
C19orf54-209ENST00000598485 BICRAQ9NZM4 1560 aa22.53■■□□□ 1.2
C19orf54-209ENST00000598485 SCRIBQ14160 1630 aa22.42■■□□□ 1.18
C19orf54-209ENST00000598485 SHROOM4Q9ULL8 1493 aa22.22■■□□□ 1.15
C19orf54-209ENST00000598485 CC2D2AQ9P2K1 1620 aa22.04■■□□□ 1.12
C19orf54-209ENST00000598485 EIF4G1Q04637 1599 aaKnown RBP22.01■■□□□ 1.11
C19orf54-209ENST00000598485 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
C19orf54-209ENST00000598485 NCAPD3P42695 1498 aa21.36■■□□□ 1.01
C19orf54-209ENST00000598485 SMARCA4P51532 1647 aa21.35■■□□□ 1.01
C19orf54-209ENST00000598485 ATAD2BQ9ULI0 1458 aa21.33■■□□□ 1.01
C19orf54-209ENST00000598485 SMARCA2P51531 1590 aa21.31■■□□□ 1
C19orf54-209ENST00000598485 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
C19orf54-209ENST00000598485 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
C19orf54-209ENST00000598485 HMGXB3Q12766 1538 aa21.19■□□□□ 0.98
C19orf54-209ENST00000598485 ERCC6Q03468 1493 aa21.15■□□□□ 0.98
C19orf54-209ENST00000598485 MROH2BQ7Z745 1585 aa21.14■□□□□ 0.98
C19orf54-209ENST00000598485 PEG3Q9GZU2 1588 aa21.07■□□□□ 0.96
C19orf54-209ENST00000598485 NESP48681 1621 aa21.01■□□□□ 0.95
C19orf54-209ENST00000598485 CUX2O14529 1486 aa20.94■□□□□ 0.94
C19orf54-209ENST00000598485 WIZO95785 1651 aa20.92■□□□□ 0.94
C19orf54-209ENST00000598485 LAMC3Q9Y6N6 1575 aa20.87■□□□□ 0.93
C19orf54-209ENST00000598485 PDS5BQ9NTI5 1447 aa20.8■□□□□ 0.92
C19orf54-209ENST00000598485 DNAJC5Q9H3Z4 198 aa20.79■□□□□ 0.92
C19orf54-209ENST00000598485 RSF1Q96T23 1441 aaPredicted RBP20.78■□□□□ 0.92
C19orf54-209ENST00000598485 CADPSQ9ULU8 1353 aa20.77■□□□□ 0.92
C19orf54-209ENST00000598485 KIF21AQ7Z4S6 1674 aa20.73■□□□□ 0.91
C19orf54-209ENST00000598485 THOC2Q8NI27 1593 aaKnown RBP20.69■□□□□ 0.9
C19orf54-209ENST00000598485 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
C19orf54-209ENST00000598485 MRC2Q9UBG0 1479 aa20.57■□□□□ 0.88
C19orf54-209ENST00000598485 CEP164Q9UPV0 1460 aa20.56■□□□□ 0.88
C19orf54-209ENST00000598485 FANCD2Q9BXW9 1451 aa20.54■□□□□ 0.88
C19orf54-209ENST00000598485 CFTRP13569 1480 aa20.52■□□□□ 0.88
C19orf54-209ENST00000598485 WDR62O43379 1518 aa20.46■□□□□ 0.87
C19orf54-209ENST00000598485 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
C19orf54-209ENST00000598485 PRDM2Q13029 1718 aa20.33■□□□□ 0.84
C19orf54-209ENST00000598485 URB2Q14146 1524 aaKnown RBP20.32■□□□□ 0.84
C19orf54-209ENST00000598485 SUPT5HO00267 1087 aaKnown RBP20.2■□□□□ 0.82
C19orf54-209ENST00000598485 TOPBP1Q92547 1522 aa20.15■□□□□ 0.82
C19orf54-209ENST00000598485 ABCC8Q09428 1581 aa20.15■□□□□ 0.82
C19orf54-209ENST00000598485 OSCARQ8IYS5 282 aa20.14■□□□□ 0.81
C19orf54-209ENST00000598485 IFT140Q96RY7 1462 aa20.12■□□□□ 0.81
C19orf54-209ENST00000598485 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
C19orf54-209ENST00000598485 DNMBPQ6XZF7 1577 aa20.08■□□□□ 0.81
C19orf54-209ENST00000598485 ZNF608Q9ULD9 1512 aaPredicted RBP20.06■□□□□ 0.8
C19orf54-209ENST00000598485 AQRO60306 1485 aaKnown RBP eCLIP19.95■□□□□ 0.786e-6■■■■□ 25.1
C19orf54-209ENST00000598485 POLA1P09884 1462 aaPredicted RBP19.94■□□□□ 0.78
C19orf54-209ENST00000598485 FBLN2P98095 1184 aa19.94■□□□□ 0.78
C19orf54-209ENST00000598485 EIF4G3O43432 1585 aaKnown RBP19.94■□□□□ 0.78
C19orf54-209ENST00000598485 SOGA1O94964 1423 aa19.93■□□□□ 0.78
C19orf54-209ENST00000598485 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
C19orf54-209ENST00000598485 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
C19orf54-209ENST00000598485 TDRD9Q8NDG6 1382 aaKnown RBP19.88■□□□□ 0.77
C19orf54-209ENST00000598485 FGD5Q6ZNL6 1462 aa19.87■□□□□ 0.77
C19orf54-209ENST00000598485 CUX1P39880 1505 aa19.85■□□□□ 0.77
C19orf54-209ENST00000598485 CHD1O14646 1710 aa19.79■□□□□ 0.76
C19orf54-209ENST00000598485 CHMP7Q8WUX9 453 aaPredicted RBP19.77■□□□□ 0.76
C19orf54-209ENST00000598485 RIMBP3CA6NJZ7 1639 aa19.75■□□□□ 0.75
C19orf54-209ENST00000598485 RIMBP3BA6NNM3 1639 aa19.75■□□□□ 0.75
C19orf54-209ENST00000598485 RIMBP3Q9UFD9 1639 aa19.75■□□□□ 0.75
C19orf54-209ENST00000598485 SNAPC4Q5SXM2 1469 aa19.73■□□□□ 0.75
C19orf54-209ENST00000598485 WDR97A6NE52 1622 aa19.7■□□□□ 0.74
C19orf54-209ENST00000598485 GRIN2BQ13224 1484 aa19.7■□□□□ 0.74
C19orf54-209ENST00000598485 ARHGEF11O15085 1522 aa19.7■□□□□ 0.74
C19orf54-209ENST00000598485 CYB5RLQ6IPT4 315 aa19.69■□□□□ 0.74
C19orf54-209ENST00000598485 GAPVD1Q14C86 1478 aa19.67■□□□□ 0.74
C19orf54-209ENST00000598485 MAGI1Q96QZ7 1491 aaPredicted RBP19.66■□□□□ 0.74
C19orf54-209ENST00000598485 WRNQ14191 1432 aaPredicted RBP eCLIP19.65■□□□□ 0.74
C19orf54-209ENST00000598485 ABCA10Q8WWZ4 1543 aa19.62■□□□□ 0.73
C19orf54-209ENST00000598485 PBRM1Q86U86 1689 aa19.61■□□□□ 0.73
C19orf54-209ENST00000598485 SYNJ2O15056 1496 aa19.6■□□□□ 0.73
C19orf54-209ENST00000598485 SYNJ1O43426 1573 aa19.59■□□□□ 0.73
C19orf54-209ENST00000598485 TOP2BQ02880 1626 aa19.57■□□□□ 0.72
C19orf54-209ENST00000598485 BIVM-ERCC5R4GMW8 1640 aa19.56■□□□□ 0.72
C19orf54-209ENST00000598485 ABCA5Q8WWZ7 1642 aa19.54■□□□□ 0.72
C19orf54-209ENST00000598485 ARAP1Q96P48 1450 aa19.5■□□□□ 0.71
C19orf54-209ENST00000598485 CLASP1Q7Z460 1538 aa19.5■□□□□ 0.71
C19orf54-209ENST00000598485 TRHP20396 242 aaPredicted RBP19.49■□□□□ 0.71
C19orf54-209ENST00000598485 GRIN2AQ12879 1464 aa19.43■□□□□ 0.7
C19orf54-209ENST00000598485 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
C19orf54-209ENST00000598485 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
C19orf54-209ENST00000598485 ERICH3Q5RHP9 1530 aa19.38■□□□□ 0.69
C19orf54-209ENST00000598485 CEP170Q5SW79 1584 aa19.32■□□□□ 0.68
C19orf54-209ENST00000598485 NUP160Q12769 1436 aa19.32■□□□□ 0.68
C19orf54-209ENST00000598485 KIF27Q86VH2 1401 aa19.28■□□□□ 0.68
C19orf54-209ENST00000598485 ERCC6L2Q5T890 1561 aa19.25■□□□□ 0.67
C19orf54-209ENST00000598485 JPH4Q96JJ6 628 aa19.25■□□□□ 0.67
C19orf54-209ENST00000598485 IGF1RP08069 1367 aa19.21■□□□□ 0.67
C19orf54-209ENST00000598485 PRG4Q92954 1404 aaPredicted RBP19.21■□□□□ 0.67
C19orf54-209ENST00000598485 SHROOM2Q13796 1616 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms