RNA–Protein interactions for RNA: ENST00000339877.8

RBPMS-203, Transcript of RNA binding protein, mRNA processing factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBPMS, Length 1,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBPMS-203ENST00000339877 NISCHQ9Y2I1 1504 aa43.4■■■■■ 4.54
RBPMS-203ENST00000339877 ABCC9O60706 1549 aa39.49■■■■□ 3.91
RBPMS-203ENST00000339877 CCDC180Q9P1Z9 1646 aa39.1■■■■□ 3.85
RBPMS-203ENST00000339877 RB1CC1Q8TDY2 1594 aa37.45■■■■□ 3.58
RBPMS-203ENST00000339877 DNAJC5BQ9UF47 199 aa37.38■■■■□ 3.58
RBPMS-203ENST00000339877 NACADO15069 1562 aa37.09■■■■□ 3.53
RBPMS-203ENST00000339877 DCAF8L2P0C7V8 631 aa36.9■■■■□ 3.5
RBPMS-203ENST00000339877 PABPN1Q86U42 306 aaKnown RBP eCLIP36.74■■■■□ 3.47
RBPMS-203ENST00000339877 UNC13AQ9UPW8 1703 aa36.52■■■■□ 3.44
RBPMS-203ENST00000339877 MYO15BQ96JP2 1530 aa36.45■■■■□ 3.43
RBPMS-203ENST00000339877 BICRAQ9NZM4 1560 aa36.31■■■■□ 3.4
RBPMS-203ENST00000339877 ZCCHC6Q5VYS8 1495 aaKnown RBP35.87■■■■□ 3.33
RBPMS-203ENST00000339877 SHROOM4Q9ULL8 1493 aa35.85■■■■□ 3.33
RBPMS-203ENST00000339877 DCAF1Q9Y4B6 1507 aa35.84■■■■□ 3.33
RBPMS-203ENST00000339877 CC2D2AQ9P2K1 1620 aa35.64■■■■□ 3.3
RBPMS-203ENST00000339877 CECR2Q9BXF3 1484 aa35.63■■■■□ 3.29
RBPMS-203ENST00000339877 SCRIBQ14160 1630 aa35.59■■■■□ 3.29
RBPMS-203ENST00000339877 EIF4G1Q04637 1599 aaKnown RBP35.48■■■■□ 3.27
RBPMS-203ENST00000339877 DNAJC5Q9H3Z4 198 aa34.67■■■■□ 3.14
RBPMS-203ENST00000339877 NCAPD3P42695 1498 aa34.25■■■■□ 3.07
RBPMS-203ENST00000339877 CUX2O14529 1486 aa34.23■■■■□ 3.07
RBPMS-203ENST00000339877 ERCC6Q03468 1493 aa34.17■■■■□ 3.06
RBPMS-203ENST00000339877 ATAD2BQ9ULI0 1458 aa34.08■■■■□ 3.05
RBPMS-203ENST00000339877 SMARCA2P51531 1590 aa33.98■■■■□ 3.03
RBPMS-203ENST00000339877 HMGXB3Q12766 1538 aa33.94■■■■□ 3.02
RBPMS-203ENST00000339877 SMARCA4P51532 1647 aa33.92■■■■□ 3.02
RBPMS-203ENST00000339877 NESP48681 1621 aa33.8■■■■□ 3
RBPMS-203ENST00000339877 BAZ1BQ9UIG0 1483 aaKnown RBP33.75■■■□□ 2.99
RBPMS-203ENST00000339877 BAZ1AQ9NRL2 1556 aaPredicted RBP33.74■■■□□ 2.99
RBPMS-203ENST00000339877 PEG3Q9GZU2 1588 aa33.6■■■□□ 2.97
RBPMS-203ENST00000339877 LAMC3Q9Y6N6 1575 aa33.54■■■□□ 2.96
RBPMS-203ENST00000339877 THOC2Q8NI27 1593 aaKnown RBP33.51■■■□□ 2.96
RBPMS-203ENST00000339877 MROH2BQ7Z745 1585 aa33.43■■■□□ 2.94
RBPMS-203ENST00000339877 PDS5BQ9NTI5 1447 aa33.4■■■□□ 2.94
RBPMS-203ENST00000339877 KIF21AQ7Z4S6 1674 aa33.33■■■□□ 2.93
RBPMS-203ENST00000339877 CADPSQ9ULU8 1353 aa33.21■■■□□ 2.91
RBPMS-203ENST00000339877 MRC2Q9UBG0 1479 aa33.09■■■□□ 2.89
RBPMS-203ENST00000339877 WIZO95785 1651 aa33■■■□□ 2.87
RBPMS-203ENST00000339877 TRIM41Q8WV44 630 aa33■■■□□ 2.87
RBPMS-203ENST00000339877 WDR62O43379 1518 aa32.99■■■□□ 2.87
RBPMS-203ENST00000339877 CEP164Q9UPV0 1460 aa32.9■■■□□ 2.86
RBPMS-203ENST00000339877 FANCD2Q9BXW9 1451 aa32.81■■■□□ 2.84
RBPMS-203ENST00000339877 CFTRP13569 1480 aa32.73■■■□□ 2.83
RBPMS-203ENST00000339877 OSCARQ8IYS5 282 aa32.66■■■□□ 2.82
RBPMS-203ENST00000339877 RSF1Q96T23 1441 aaPredicted RBP32.61■■■□□ 2.81
RBPMS-203ENST00000339877 TOP2AP11388 1531 aaKnown RBP32.57■■■□□ 2.8
RBPMS-203ENST00000339877 URB2Q14146 1524 aaKnown RBP32.54■■■□□ 2.8
RBPMS-203ENST00000339877 PRDM2Q13029 1718 aa32.32■■■□□ 2.76
RBPMS-203ENST00000339877 IFT140Q96RY7 1462 aa32.26■■■□□ 2.75
RBPMS-203ENST00000339877 CCDC88BA6NC98 1476 aa32.22■■■□□ 2.75
RBPMS-203ENST00000339877 ZNF608Q9ULD9 1512 aaPredicted RBP32.2■■■□□ 2.74
RBPMS-203ENST00000339877 RIMBP3CA6NJZ7 1639 aa32.18■■■□□ 2.74
RBPMS-203ENST00000339877 RIMBP3BA6NNM3 1639 aa32.18■■■□□ 2.74
RBPMS-203ENST00000339877 RIMBP3Q9UFD9 1639 aa32.18■■■□□ 2.74
RBPMS-203ENST00000339877 TOPBP1Q92547 1522 aa32.14■■■□□ 2.74
RBPMS-203ENST00000339877 ABCC8Q09428 1581 aa32.1■■■□□ 2.73
RBPMS-203ENST00000339877 ARHGEF11O15085 1522 aa32.05■■■□□ 2.72
RBPMS-203ENST00000339877 EIF4G3O43432 1585 aaKnown RBP31.99■■■□□ 2.71
RBPMS-203ENST00000339877 DNMBPQ6XZF7 1577 aa31.98■■■□□ 2.71
RBPMS-203ENST00000339877 CYB5RLQ6IPT4 315 aa31.9■■■□□ 2.7
RBPMS-203ENST00000339877 AQRO60306 1485 aaKnown RBP eCLIP31.89■■■□□ 2.73e-6■■■■□ 25.5
RBPMS-203ENST00000339877 TARBP1Q13395 1621 aaKnown RBP31.85■■■□□ 2.69
RBPMS-203ENST00000339877 FBLN2P98095 1184 aa31.83■■■□□ 2.69
RBPMS-203ENST00000339877 CHD1O14646 1710 aa31.82■■■□□ 2.68
RBPMS-203ENST00000339877 POLA1P09884 1462 aaPredicted RBP31.78■■■□□ 2.68
RBPMS-203ENST00000339877 TRHP20396 242 aaPredicted RBP31.71■■■□□ 2.67
RBPMS-203ENST00000339877 ARAP1Q96P48 1450 aa31.7■■■□□ 2.67
RBPMS-203ENST00000339877 SOGA1O94964 1423 aa31.68■■■□□ 2.66
RBPMS-203ENST00000339877 RAD54L2Q9Y4B4 1467 aa31.67■■■□□ 2.66
RBPMS-203ENST00000339877 TDRD9Q8NDG6 1382 aaKnown RBP31.65■■■□□ 2.66
RBPMS-203ENST00000339877 WDR97A6NE52 1622 aa31.54■■■□□ 2.64
RBPMS-203ENST00000339877 SNAPC4Q5SXM2 1469 aa31.54■■■□□ 2.64
RBPMS-203ENST00000339877 CHMP7Q8WUX9 453 aaPredicted RBP31.53■■■□□ 2.64
RBPMS-203ENST00000339877 FGD5Q6ZNL6 1462 aa31.52■■■□□ 2.64
RBPMS-203ENST00000339877 MAGI1Q96QZ7 1491 aaPredicted RBP31.47■■■□□ 2.63
RBPMS-203ENST00000339877 CLASP1Q7Z460 1538 aa31.46■■■□□ 2.63
RBPMS-203ENST00000339877 SYNJ1O43426 1573 aa31.45■■■□□ 2.62
RBPMS-203ENST00000339877 GRIN2BQ13224 1484 aa31.43■■■□□ 2.62
RBPMS-203ENST00000339877 CUX1P39880 1505 aa31.42■■■□□ 2.62
RBPMS-203ENST00000339877 SYNJ2O15056 1496 aa31.37■■■□□ 2.61
RBPMS-203ENST00000339877 GAPVD1Q14C86 1478 aa31.27■■■□□ 2.6
RBPMS-203ENST00000339877 PBRM1Q86U86 1689 aa31.23■■■□□ 2.59
RBPMS-203ENST00000339877 ABCA10Q8WWZ4 1543 aa31.16■■■□□ 2.58
RBPMS-203ENST00000339877 ABCA5Q8WWZ7 1642 aa31.11■■■□□ 2.57
RBPMS-203ENST00000339877 AEBP2Q6ZN18 517 aaPredicted RBP31.09■■■□□ 2.57
RBPMS-203ENST00000339877 GRIN2AQ12879 1464 aa31.01■■■□□ 2.55
RBPMS-203ENST00000339877 WRNQ14191 1432 aaPredicted RBP eCLIP31■■■□□ 2.55
RBPMS-203ENST00000339877 SUPT5HO00267 1087 aaKnown RBP30.95■■■□□ 2.54
RBPMS-203ENST00000339877 ERCC6L2Q5T890 1561 aa30.92■■■□□ 2.54
RBPMS-203ENST00000339877 NUP160Q12769 1436 aa30.91■■■□□ 2.54
RBPMS-203ENST00000339877 ADAMTS12P58397 1594 aa30.9■■■□□ 2.54
RBPMS-203ENST00000339877 CEP170Q5SW79 1584 aa30.89■■■□□ 2.53
RBPMS-203ENST00000339877 FHAD1B1AJZ9 1412 aa30.87■■■□□ 2.53
RBPMS-203ENST00000339877 TOP2BQ02880 1626 aa30.83■■■□□ 2.53
RBPMS-203ENST00000339877 BIVM-ERCC5R4GMW8 1640 aa30.82■■■□□ 2.52
RBPMS-203ENST00000339877 SHROOM2Q13796 1616 aa30.79■■■□□ 2.52
RBPMS-203ENST00000339877 ERICH3Q5RHP9 1530 aa30.77■■■□□ 2.52
RBPMS-203ENST00000339877 PRG4Q92954 1404 aaPredicted RBP30.68■■■□□ 2.5
RBPMS-203ENST00000339877 JPH4Q96JJ6 628 aa30.67■■■□□ 2.5
RBPMS-203ENST00000339877 KIF13AQ9H1H9 1805 aa30.57■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms