Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
TRAV8-6A0A0B4J262 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 LINC02228-203ENST00000641970 1355 ntBASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 AC019069.1-201ENST00000610008 1333 ntBASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRAV8-6A0A0B4J262 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 AC006128.1-201ENST00000624704 1661 ntBASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 ZNRF2P3-201ENST00000424200 374 ntBASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 AL049812.1-201ENST00000432563 2267 ntBASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-6A0A0B4J262 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 AC026471.6-201ENST00000622954 1905 ntBASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 AC123595.1-201ENST00000440769 1046 ntBASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-6A0A0B4J262 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms