RNA–Protein interactions for RNA: ENST00000366759.8

SNAP47-202, Transcript of synaptosome associated protein 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNAP47, Length 2,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-202ENST00000366759 NISCHQ9Y2I1 1504 aa39.24■■■■□ 3.87
SNAP47-202ENST00000366759 SHROOM4Q9ULL8 1493 aa33.71■■■□□ 2.99
SNAP47-202ENST00000366759 ZCCHC6Q5VYS8 1495 aaKnown RBP33.18■■■□□ 2.9
SNAP47-202ENST00000366759 CCDC180Q9P1Z9 1646 aa33.18■■■□□ 2.9
SNAP47-202ENST00000366759 SUPT5HO00267 1087 aaKnown RBP33.1■■■□□ 2.89
SNAP47-202ENST00000366759 DCAF8L2P0C7V8 631 aa32.76■■■□□ 2.83
SNAP47-202ENST00000366759 CHIC1Q5VXU3 224 aa32.15■■■□□ 2.74
SNAP47-202ENST00000366759 DCAF1Q9Y4B6 1507 aa32.09■■■□□ 2.73
SNAP47-202ENST00000366759 MYO15BQ96JP2 1530 aa32.03■■■□□ 2.72
SNAP47-202ENST00000366759 ABCC9O60706 1549 aa31.3■■■□□ 2.6
SNAP47-202ENST00000366759 SCRIBQ14160 1630 aa31.3■■■□□ 2.6
SNAP47-202ENST00000366759 PCGF6Q9BYE7 350 aa31.29■■■□□ 2.6
SNAP47-202ENST00000366759 LOC105371045A0A1W2PR82 267 aa31.28■■■□□ 2.6
SNAP47-202ENST00000366759 HRCP23327 699 aa31.26■■■□□ 2.59
SNAP47-202ENST00000366759 RSF1Q96T23 1441 aaPredicted RBP31.14■■■□□ 2.57
SNAP47-202ENST00000366759 RB1CC1Q8TDY2 1594 aa30.79■■■□□ 2.52
SNAP47-202ENST00000366759 TRIM41Q8WV44 630 aa30.77■■■□□ 2.52
SNAP47-202ENST00000366759 NACADO15069 1562 aa30.73■■■□□ 2.51
SNAP47-202ENST00000366759 PPARGC1BQ86YN6 1023 aaKnown RBP30.71■■■□□ 2.51
SNAP47-202ENST00000366759 CECR2Q9BXF3 1484 aa30.69■■■□□ 2.5
SNAP47-202ENST00000366759 FAM9AQ8IZU1 332 aaPredicted RBP30.61■■■□□ 2.49
SNAP47-202ENST00000366759 TRIM26Q12899 539 aaPredicted RBP30.59■■■□□ 2.49
SNAP47-202ENST00000366759 MROH2BQ7Z745 1585 aa30.56■■■□□ 2.48
SNAP47-202ENST00000366759 EHMT2Q96KQ7 1210 aa30.43■■■□□ 2.46
SNAP47-202ENST00000366759 WIZO95785 1651 aa30.37■■■□□ 2.45
SNAP47-202ENST00000366759 BAZ1AQ9NRL2 1556 aaPredicted RBP30.12■■■□□ 2.41
SNAP47-202ENST00000366759 EIF4G1Q04637 1599 aaKnown RBP29.92■■■□□ 2.38
SNAP47-202ENST00000366759 ZEB1P37275 1124 aaPredicted RBP29.88■■■□□ 2.37
SNAP47-202ENST00000366759 TOP2AP11388 1531 aaKnown RBP29.85■■■□□ 2.37
SNAP47-202ENST00000366759 SMARCA4P51532 1647 aa29.84■■■□□ 2.37
SNAP47-202ENST00000366759 CCDC88BA6NC98 1476 aa29.81■■■□□ 2.36
SNAP47-202ENST00000366759 ABCC8Q09428 1581 aa29.78■■■□□ 2.36
SNAP47-202ENST00000366759 UNC13AQ9UPW8 1703 aa29.76■■■□□ 2.35
SNAP47-202ENST00000366759 SMARCA2P51531 1590 aa29.71■■■□□ 2.35
SNAP47-202ENST00000366759 PABPN1Q86U42 306 aaKnown RBP eCLIP29.67■■■□□ 2.34
SNAP47-202ENST00000366759 SOGA1O94964 1423 aa29.55■■■□□ 2.32
SNAP47-202ENST00000366759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.45■■■□□ 2.31
SNAP47-202ENST00000366759 BICRAQ9NZM4 1560 aa29.45■■■□□ 2.3
SNAP47-202ENST00000366759 TTBK1Q5TCY1 1321 aaPredicted RBP29.44■■■□□ 2.3
SNAP47-202ENST00000366759 CEP162Q5TB80 1403 aa29.41■■■□□ 2.3
SNAP47-202ENST00000366759 RUSC2Q8N2Y8 1516 aa29.4■■■□□ 2.3
SNAP47-202ENST00000366759 CSRNP3Q8WYN3 585 aa29.38■■■□□ 2.29
SNAP47-202ENST00000366759 CCER1Q8TC90 406 aaPredicted RBP29.34■■■□□ 2.29
SNAP47-202ENST00000366759 UBTFP17480 764 aaKnown RBP29.32■■■□□ 2.28
SNAP47-202ENST00000366759 TNIKQ9UKE5 1360 aa29.32■■■□□ 2.28
SNAP47-202ENST00000366759 WRNQ14191 1432 aaPredicted RBP eCLIP29.31■■■□□ 2.28
SNAP47-202ENST00000366759 EEA1Q15075 1411 aa29.26■■■□□ 2.27
SNAP47-202ENST00000366759 PEG3Q9GZU2 1588 aa29.21■■■□□ 2.27
SNAP47-202ENST00000366759 GOLGA3Q08378 1498 aa29.12■■■□□ 2.25
SNAP47-202ENST00000366759 ATAD2BQ9ULI0 1458 aa29.11■■■□□ 2.25
SNAP47-202ENST00000366759 SYNJ1O43426 1573 aa29.07■■■□□ 2.24
SNAP47-202ENST00000366759 BAZ1BQ9UIG0 1483 aaKnown RBP29.04■■■□□ 2.24
SNAP47-202ENST00000366759 CEP164Q9UPV0 1460 aa28.95■■■□□ 2.22
SNAP47-202ENST00000366759 SCAF1Q9H7N4 1312 aaKnown RBP28.88■■■□□ 2.21
SNAP47-202ENST00000366759 KIF21BO75037 1637 aa28.85■■■□□ 2.21
SNAP47-202ENST00000366759 CLIP1P30622 1438 aa28.84■■■□□ 2.21
SNAP47-202ENST00000366759 RANGAP1P46060 587 aaPredicted RBP28.83■■■□□ 2.21
SNAP47-202ENST00000366759 RAPGEF2Q9Y4G8 1499 aa28.79■■■□□ 2.2
SNAP47-202ENST00000366759 DIEXFQ68CQ4 756 aaKnown RBP28.78■■■□□ 2.2
SNAP47-202ENST00000366759 HNRNPUL2Q1KMD3 747 aaKnown RBP28.74■■■□□ 2.19
SNAP47-202ENST00000366759 VPS8Q8N3P4 1428 aa28.69■■■□□ 2.18
SNAP47-202ENST00000366759 TOP2BQ02880 1626 aa28.66■■■□□ 2.18
SNAP47-202ENST00000366759 APLP2Q06481 763 aa28.64■■■□□ 2.18
SNAP47-202ENST00000366759 NEUROD1Q13562 356 aa28.57■■■□□ 2.16
SNAP47-202ENST00000366759 ACIN1Q9UKV3 1341 aaKnown RBP28.56■■■□□ 2.16
SNAP47-202ENST00000366759 ZNF316A6NFI3 1004 aaPredicted RBP28.53■■■□□ 2.16
SNAP47-202ENST00000366759 BIVM-ERCC5R4GMW8 1640 aa28.51■■■□□ 2.15
SNAP47-202ENST00000366759 NCAPD3P42695 1498 aa28.5■■■□□ 2.15
SNAP47-202ENST00000366759 PRXQ9BXM0 1461 aa28.44■■■□□ 2.14
SNAP47-202ENST00000366759 HMGXB3Q12766 1538 aa28.44■■■□□ 2.14
SNAP47-202ENST00000366759 CUX1P39880 1505 aa28.42■■■□□ 2.14
SNAP47-202ENST00000366759 ERICH3Q5RHP9 1530 aa28.38■■■□□ 2.13
SNAP47-202ENST00000366759 CENPBP07199 599 aaPredicted RBP28.36■■■□□ 2.13
SNAP47-202ENST00000366759 ARAP1Q96P48 1450 aa28.34■■■□□ 2.13
SNAP47-202ENST00000366759 KIF27Q86VH2 1401 aa28.32■■■□□ 2.12
SNAP47-202ENST00000366759 KANK4Q5T7N3 995 aaPredicted RBP28.31■■■□□ 2.12
SNAP47-202ENST00000366759 CFTRP13569 1480 aa28.31■■■□□ 2.12
SNAP47-202ENST00000366759 GTF3C3Q9Y5Q9 886 aa28.28■■■□□ 2.12
SNAP47-202ENST00000366759 MIER1Q8N108 512 aa28.18■■■□□ 2.1
SNAP47-202ENST00000366759 YTHDC1Q96MU7 727 aaKnown RBP28.18■■■□□ 2.1
SNAP47-202ENST00000366759 PELP1Q8IZL8 1130 aaKnown RBP28.16■■■□□ 2.1
SNAP47-202ENST00000366759 ARHGAP35Q9NRY4 1499 aa28.1■■■□□ 2.09
SNAP47-202ENST00000366759 DHX57Q6P158 1386 aaKnown RBP28.1■■■□□ 2.09
SNAP47-202ENST00000366759 CUX2O14529 1486 aa28.06■■■□□ 2.08
SNAP47-202ENST00000366759 IGF1RP08069 1367 aa28.05■■■□□ 2.08
SNAP47-202ENST00000366759 RRBP1Q9P2E9 1410 aaKnown RBP28.02■■■□□ 2.08
SNAP47-202ENST00000366759 CADPSQ9ULU8 1353 aa28.01■■■□□ 2.07
SNAP47-202ENST00000366759 CLSPNQ9HAW4 1339 aa27.99■■■□□ 2.07
SNAP47-202ENST00000366759 ITGAEP38570 1179 aa27.99■■■□□ 2.07
SNAP47-202ENST00000366759 CCNB3Q8WWL7 1395 aa27.95■■■□□ 2.07
SNAP47-202ENST00000366759 CARMIL1Q5VZK9 1371 aa27.92■■■□□ 2.06
SNAP47-202ENST00000366759 FGD5Q6ZNL6 1462 aa27.92■■■□□ 2.06
SNAP47-202ENST00000366759 PRDM2Q13029 1718 aa27.91■■■□□ 2.06
SNAP47-202ENST00000366759 P3H3Q8IVL6 736 aa27.8■■■□□ 2.04
SNAP47-202ENST00000366759 TIAM1Q13009 1591 aa27.76■■■□□ 2.03
SNAP47-202ENST00000366759 CC2D2AQ9P2K1 1620 aa27.75■■■□□ 2.03
SNAP47-202ENST00000366759 FANCD2Q9BXW9 1451 aa27.74■■■□□ 2.03
SNAP47-202ENST00000366759 RAB3GAP2Q9H2M9 1393 aa27.73■■■□□ 2.03
SNAP47-202ENST00000366759 ATP1B4Q9UN42 357 aaPredicted RBP27.72■■■□□ 2.03
SNAP47-202ENST00000366759 LRRC9Q6ZRR7 1453 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms