RNA–Protein interactions for RNA: ENST00000586869.5

NLE1-203, Transcript of notchless homolog 1, humanhuman

TSL 1 (best) BASIC

Gene NLE1, Length 5,286 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-203ENST00000586869 NISCHQ9Y2I1 1504 aa31.29■■■□□ 2.6
NLE1-203ENST00000586869 DCAF8L2P0C7V8 631 aa30.53■■■□□ 2.48
NLE1-203ENST00000586869 SUPT5HO00267 1087 aaKnown RBP29.7■■■□□ 2.35
NLE1-203ENST00000586869 SHROOM4Q9ULL8 1493 aa29.34■■■□□ 2.29
NLE1-203ENST00000586869 PCGF6Q9BYE7 350 aa28.25■■■□□ 2.11
NLE1-203ENST00000586869 EHMT2Q96KQ7 1210 aa28.11■■■□□ 2.09
NLE1-203ENST00000586869 FAM9AQ8IZU1 332 aaPredicted RBP27.8■■■□□ 2.04
NLE1-203ENST00000586869 ZEB1P37275 1124 aaPredicted RBP27.75■■■□□ 2.03
NLE1-203ENST00000586869 TRIM41Q8WV44 630 aa27.59■■■□□ 2.01
NLE1-203ENST00000586869 PELP1Q8IZL8 1130 aaKnown RBP27.52■■■□□ 2
NLE1-203ENST00000586869 APLP2Q06481 763 aa27.5■■□□□ 1.99
NLE1-203ENST00000586869 HRCP23327 699 aa27.5■■□□□ 1.99
NLE1-203ENST00000586869 CHIC1Q5VXU3 224 aa27.34■■□□□ 1.97
NLE1-203ENST00000586869 CENPBP07199 599 aaPredicted RBP27.31■■□□□ 1.96
NLE1-203ENST00000586869 TRIM26Q12899 539 aaPredicted RBP27.28■■□□□ 1.96
NLE1-203ENST00000586869 CCER1Q8TC90 406 aaPredicted RBP27.28■■□□□ 1.96
NLE1-203ENST00000586869 TTBK1Q5TCY1 1321 aaPredicted RBP27.28■■□□□ 1.96
NLE1-203ENST00000586869 LOC105371045A0A1W2PR82 267 aa27.01■■□□□ 1.91
NLE1-203ENST00000586869 UBTFP17480 764 aaKnown RBP26.89■■□□□ 1.9
NLE1-203ENST00000586869 PPARGC1BQ86YN6 1023 aaKnown RBP26.79■■□□□ 1.88
NLE1-203ENST00000586869 RANGAP1P46060 587 aaPredicted RBP26.74■■□□□ 1.87
NLE1-203ENST00000586869 MYT1Q01538 1121 aa26.62■■□□□ 1.85
NLE1-203ENST00000586869 YTHDC1Q96MU7 727 aaKnown RBP26.58■■□□□ 1.85
NLE1-203ENST00000586869 ABCC9O60706 1549 aa26.49■■□□□ 1.83
NLE1-203ENST00000586869 ATP1B4Q9UN42 357 aaPredicted RBP26.28■■□□□ 1.8
NLE1-203ENST00000586869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.25■■□□□ 1.79
NLE1-203ENST00000586869 NEFLP07196 543 aa26.25■■□□□ 1.79
NLE1-203ENST00000586869 ERICH6Q7L0X2 663 aa26.24■■□□□ 1.79
NLE1-203ENST00000586869 DIEXFQ68CQ4 756 aaKnown RBP26.18■■□□□ 1.78
NLE1-203ENST00000586869 HNRNPUL2Q1KMD3 747 aaKnown RBP26.15■■□□□ 1.78
NLE1-203ENST00000586869 ZCCHC6Q5VYS8 1495 aaKnown RBP26.14■■□□□ 1.78
NLE1-203ENST00000586869 PABPN1Q86U42 306 aaKnown RBP eCLIP26.11■■□□□ 1.77
NLE1-203ENST00000586869 DCAF1Q9Y4B6 1507 aa26.03■■□□□ 1.76
NLE1-203ENST00000586869 ITGAEP38570 1179 aa25.91■■□□□ 1.74
NLE1-203ENST00000586869 GTF3C3Q9Y5Q9 886 aa25.79■■□□□ 1.72
NLE1-203ENST00000586869 CCDC180Q9P1Z9 1646 aa25.68■■□□□ 1.7
NLE1-203ENST00000586869 ACIN1Q9UKV3 1341 aaKnown RBP25.68■■□□□ 1.7
NLE1-203ENST00000586869 ZNF316A6NFI3 1004 aaPredicted RBP25.67■■□□□ 1.7
NLE1-203ENST00000586869 MYO15BQ96JP2 1530 aa25.66■■□□□ 1.7
NLE1-203ENST00000586869 CSRNP3Q8WYN3 585 aa25.53■■□□□ 1.68
NLE1-203ENST00000586869 SCRIBQ14160 1630 aa25.44■■□□□ 1.66
NLE1-203ENST00000586869 FAM50AQ14320 339 aaKnown RBP25.37■■□□□ 1.65
NLE1-203ENST00000586869 POLR3GLQ9BT43 218 aa25.28■■□□□ 1.64
NLE1-203ENST00000586869 NEUROD1Q13562 356 aa25.26■■□□□ 1.63
NLE1-203ENST00000586869 SCAF1Q9H7N4 1312 aaKnown RBP25.19■■□□□ 1.62
NLE1-203ENST00000586869 ANP32CO43423 234 aa25.17■■□□□ 1.62
NLE1-203ENST00000586869 RSF1Q96T23 1441 aaPredicted RBP25.16■■□□□ 1.62
NLE1-203ENST00000586869 BCANQ96GW7 911 aa25.15■■□□□ 1.62
NLE1-203ENST00000586869 CLSPNQ9HAW4 1339 aa25.11■■□□□ 1.61
NLE1-203ENST00000586869 MYT1LQ9UL68 1186 aa25.11■■□□□ 1.61
NLE1-203ENST00000586869 CNGB1Q14028 1251 aaPredicted RBP25.07■■□□□ 1.6
NLE1-203ENST00000586869 DAXXQ9UER7 740 aaPredicted RBP25.07■■□□□ 1.6
NLE1-203ENST00000586869 TRIM52Q96A61 297 aa25.04■■□□□ 1.6
NLE1-203ENST00000586869 CDK11AQ9UQ88 783 aaPredicted RBP24.94■■□□□ 1.58
NLE1-203ENST00000586869 FBLN2P98095 1184 aa24.91■■□□□ 1.58
NLE1-203ENST00000586869 RTL5Q5HYW3 569 aaPredicted RBP24.9■■□□□ 1.58
NLE1-203ENST00000586869 EEA1Q15075 1411 aa24.86■■□□□ 1.57
NLE1-203ENST00000586869 CEP162Q5TB80 1403 aa24.85■■□□□ 1.57
NLE1-203ENST00000586869 MIER1Q8N108 512 aa24.84■■□□□ 1.57
NLE1-203ENST00000586869 P3H3Q8IVL6 736 aa24.8■■□□□ 1.56
NLE1-203ENST00000586869 CLIP1P30622 1438 aa24.8■■□□□ 1.56
NLE1-203ENST00000586869 RB1CC1Q8TDY2 1594 aa24.79■■□□□ 1.56
NLE1-203ENST00000586869 GOLGA3Q08378 1498 aa24.74■■□□□ 1.55
NLE1-203ENST00000586869 FKBP8Q14318 412 aa24.73■■□□□ 1.55
NLE1-203ENST00000586869 TNIKQ9UKE5 1360 aa24.72■■□□□ 1.55
NLE1-203ENST00000586869 DDX10Q13206 875 aaKnown RBP24.68■■□□□ 1.54
NLE1-203ENST00000586869 TONSLQ96HA7 1378 aa24.67■■□□□ 1.54
NLE1-203ENST00000586869 ZNF326Q5BKZ1 582 aaKnown RBP24.65■■□□□ 1.54
NLE1-203ENST00000586869 NACADO15069 1562 aa24.63■■□□□ 1.53
NLE1-203ENST00000586869 WRNQ14191 1432 aaPredicted RBP eCLIP24.55■■□□□ 1.52
NLE1-203ENST00000586869 HNRNPUQ00839 825 aaKnown RBP eCLIP24.52■■□□□ 1.52
NLE1-203ENST00000586869 CEP164Q9UPV0 1460 aa24.5■■□□□ 1.51
NLE1-203ENST00000586869 CECR2Q9BXF3 1484 aa24.48■■□□□ 1.51
NLE1-203ENST00000586869 BAZ1AQ9NRL2 1556 aaPredicted RBP24.45■■□□□ 1.51
NLE1-203ENST00000586869 ARID3CA6NKF2 412 aa24.45■■□□□ 1.5
NLE1-203ENST00000586869 ANP32AP39687 249 aaKnown RBP24.44■■□□□ 1.5
NLE1-203ENST00000586869 SLC4A1APQ9BWU0 796 aaKnown RBP24.41■■□□□ 1.5
NLE1-203ENST00000586869 FAM9BQ8IZU0 186 aa24.33■■□□□ 1.48
NLE1-203ENST00000586869 SOGA1O94964 1423 aa24.31■■□□□ 1.48
NLE1-203ENST00000586869 MTUS2Q5JR59 1369 aa24.28■■□□□ 1.48
NLE1-203ENST00000586869 MROH2BQ7Z745 1585 aa24.27■■□□□ 1.48
NLE1-203ENST00000586869 ZNF777Q9ULD5 760 aaPredicted RBP24.26■■□□□ 1.47
NLE1-203ENST00000586869 HIRIP3Q9BW71 556 aaPredicted RBP24.25■■□□□ 1.47
NLE1-203ENST00000586869 CHIC2Q9UKJ5 165 aa24.23■■□□□ 1.47
NLE1-203ENST00000586869 BAZ1BQ9UIG0 1483 aaKnown RBP24.22■■□□□ 1.47
NLE1-203ENST00000586869 KIF27Q86VH2 1401 aa24.22■■□□□ 1.47
NLE1-203ENST00000586869 MRS2Q9HD23 443 aa24.19■■□□□ 1.46
NLE1-203ENST00000586869 NPM2Q86SE8 214 aaKnown RBP24.16■■□□□ 1.46
NLE1-203ENST00000586869 EIF4G2P78344 907 aaKnown RBP eCLIP24.15■■□□□ 1.46
NLE1-203ENST00000586869 VPS8Q8N3P4 1428 aa24.14■■□□□ 1.46
NLE1-203ENST00000586869 CCDC136Q96JN2 1154 aa24.13■■□□□ 1.45
NLE1-203ENST00000586869 SUPT16HQ9Y5B9 1047 aaKnown RBP24.13■■□□□ 1.45
NLE1-203ENST00000586869 CCDC88BA6NC98 1476 aa24.12■■□□□ 1.45
NLE1-203ENST00000586869 CANXP27824 592 aaKnown RBP24.11■■□□□ 1.45
NLE1-203ENST00000586869 ABCC8Q09428 1581 aa24.1■■□□□ 1.45
NLE1-203ENST00000586869 TMC1Q8TDI8 760 aa24.1■■□□□ 1.45
NLE1-203ENST00000586869 CCNB3Q8WWL7 1395 aa24.09■■□□□ 1.45
NLE1-203ENST00000586869 IRX6P78412 446 aaPredicted RBP24.09■■□□□ 1.45
NLE1-203ENST00000586869 ANP32EQ9BTT0 268 aa24.09■■□□□ 1.45
NLE1-203ENST00000586869 RRP7BPQ9NSQ0 103 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms