RNA–Protein interactions for RNA: ENST00000429964.6

CDK18-203, Transcript of cyclin dependent kinase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK18, Length 1,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-203ENST00000429964 NISCHQ9Y2I1 1504 aa47.31■■■■■ 5.16
CDK18-203ENST00000429964 CCDC180Q9P1Z9 1646 aa41.28■■■■■ 4.2
CDK18-203ENST00000429964 ZCCHC6Q5VYS8 1495 aaKnown RBP39.75■■■■□ 3.95
CDK18-203ENST00000429964 DCAF1Q9Y4B6 1507 aa39.16■■■■□ 3.86
CDK18-203ENST00000429964 DCAF8L2P0C7V8 631 aa39.03■■■■□ 3.84
CDK18-203ENST00000429964 ABCC9O60706 1549 aa38.87■■■■□ 3.81
CDK18-203ENST00000429964 MYO15BQ96JP2 1530 aa38.66■■■■□ 3.78
CDK18-203ENST00000429964 SHROOM4Q9ULL8 1493 aa38.59■■■■□ 3.77
CDK18-203ENST00000429964 NACADO15069 1562 aa38.41■■■■□ 3.74
CDK18-203ENST00000429964 RB1CC1Q8TDY2 1594 aa38.07■■■■□ 3.68
CDK18-203ENST00000429964 SCRIBQ14160 1630 aa37.9■■■■□ 3.66
CDK18-203ENST00000429964 UNC13AQ9UPW8 1703 aa37.29■■■■□ 3.56
CDK18-203ENST00000429964 SUPT5HO00267 1087 aaKnown RBP37.21■■■■□ 3.55
CDK18-203ENST00000429964 BICRAQ9NZM4 1560 aa36.85■■■■□ 3.49
CDK18-203ENST00000429964 RSF1Q96T23 1441 aaPredicted RBP36.71■■■■□ 3.47
CDK18-203ENST00000429964 CECR2Q9BXF3 1484 aa36.7■■■■□ 3.47
CDK18-203ENST00000429964 PABPN1Q86U42 306 aaKnown RBP eCLIP36.65■■■■□ 3.466e-7■■□□□ 12
CDK18-203ENST00000429964 BAZ1AQ9NRL2 1556 aaPredicted RBP36.55■■■■□ 3.44
CDK18-203ENST00000429964 MROH2BQ7Z745 1585 aa36.52■■■■□ 3.44
CDK18-203ENST00000429964 SMARCA4P51532 1647 aa36.36■■■■□ 3.41
CDK18-203ENST00000429964 WIZO95785 1651 aa36.25■■■■□ 3.39
CDK18-203ENST00000429964 PEG3Q9GZU2 1588 aa35.92■■■■□ 3.34
CDK18-203ENST00000429964 TOP2AP11388 1531 aaKnown RBP35.91■■■■□ 3.34
CDK18-203ENST00000429964 SMARCA2P51531 1590 aa35.76■■■■□ 3.32
CDK18-203ENST00000429964 EIF4G1Q04637 1599 aaKnown RBP35.75■■■■□ 3.31
CDK18-203ENST00000429964 ATAD2BQ9ULI0 1458 aa35.72■■■■□ 3.31
CDK18-203ENST00000429964 CHIC1Q5VXU3 224 aa35.66■■■■□ 3.3
CDK18-203ENST00000429964 BAZ1BQ9UIG0 1483 aaKnown RBP35.55■■■■□ 3.28
CDK18-203ENST00000429964 CCDC88BA6NC98 1476 aa35.51■■■■□ 3.27
CDK18-203ENST00000429964 NCAPD3P42695 1498 aa35.42■■■■□ 3.26
CDK18-203ENST00000429964 HMGXB3Q12766 1538 aa35.4■■■■□ 3.26
CDK18-203ENST00000429964 CC2D2AQ9P2K1 1620 aa35.21■■■■□ 3.23
CDK18-203ENST00000429964 TRIM41Q8WV44 630 aa35.02■■■■□ 3.2
CDK18-203ENST00000429964 ABCC8Q09428 1581 aa34.77■■■■□ 3.16
CDK18-203ENST00000429964 CFTRP13569 1480 aa34.64■■■■□ 3.14
CDK18-203ENST00000429964 WRNQ14191 1432 aaPredicted RBP eCLIP34.58■■■■□ 3.13
CDK18-203ENST00000429964 PRDM2Q13029 1718 aa34.56■■■■□ 3.12
CDK18-203ENST00000429964 CADPSQ9ULU8 1353 aa34.52■■■■□ 3.12
CDK18-203ENST00000429964 DNAJC5BQ9UF47 199 aa34.51■■■■□ 3.11
CDK18-203ENST00000429964 SYNJ1O43426 1573 aa34.41■■■■□ 3.1
CDK18-203ENST00000429964 FAM9AQ8IZU1 332 aaPredicted RBP34.33■■■■□ 3.09
CDK18-203ENST00000429964 TOP2BQ02880 1626 aa34.3■■■■□ 3.08
CDK18-203ENST00000429964 BIVM-ERCC5R4GMW8 1640 aa34.28■■■■□ 3.08
CDK18-203ENST00000429964 LOC105371045A0A1W2PR82 267 aa34.26■■■■□ 3.08
CDK18-203ENST00000429964 LAMC3Q9Y6N6 1575 aa34.24■■■■□ 3.07
CDK18-203ENST00000429964 EEA1Q15075 1411 aa34.19■■■■□ 3.06
CDK18-203ENST00000429964 CUX1P39880 1505 aa34.15■■■■□ 3.06
CDK18-203ENST00000429964 FANCD2Q9BXW9 1451 aa34.14■■■■□ 3.06
CDK18-203ENST00000429964 SOGA1O94964 1423 aa34.13■■■■□ 3.05
CDK18-203ENST00000429964 NESP48681 1621 aa34.13■■■■□ 3.05
CDK18-203ENST00000429964 RUSC2Q8N2Y8 1516 aa33.97■■■■□ 3.03
CDK18-203ENST00000429964 PDS5BQ9NTI5 1447 aa33.96■■■■□ 3.03
CDK18-203ENST00000429964 CSRNP3Q8WYN3 585 aa33.95■■■■□ 3.03
CDK18-203ENST00000429964 CEP164Q9UPV0 1460 aa33.93■■■■□ 3.02
CDK18-203ENST00000429964 DNMBPQ6XZF7 1577 aa33.87■■■■□ 3.01
CDK18-203ENST00000429964 EHMT2Q96KQ7 1210 aa33.8■■■■□ 3
CDK18-203ENST00000429964 FGD5Q6ZNL6 1462 aa33.78■■■■□ 3
CDK18-203ENST00000429964 KIF21AQ7Z4S6 1674 aa33.78■■■■□ 3
CDK18-203ENST00000429964 TOPBP1Q92547 1522 aa33.78■■■■□ 3
CDK18-203ENST00000429964 KIF27Q86VH2 1401 aa33.73■■■□□ 2.99
CDK18-203ENST00000429964 KIF21BO75037 1637 aa33.71■■■□□ 2.99
CDK18-203ENST00000429964 GOLGA3Q08378 1498 aa33.69■■■□□ 2.98
CDK18-203ENST00000429964 URB2Q14146 1524 aaKnown RBP33.68■■■□□ 2.98
CDK18-203ENST00000429964 POLA1P09884 1462 aaPredicted RBP33.6■■■□□ 2.97
CDK18-203ENST00000429964 CUX2O14529 1486 aa33.59■■■□□ 2.97
CDK18-203ENST00000429964 TNIKQ9UKE5 1360 aa33.59■■■□□ 2.97
CDK18-203ENST00000429964 UBTFP17480 764 aaKnown RBP33.53■■■□□ 2.96
CDK18-203ENST00000429964 MRC2Q9UBG0 1479 aa33.5■■■□□ 2.95
CDK18-203ENST00000429964 ABCA10Q8WWZ4 1543 aa33.5■■■□□ 2.95
CDK18-203ENST00000429964 PRXQ9BXM0 1461 aa33.48■■■□□ 2.95
CDK18-203ENST00000429964 ERICH3Q5RHP9 1530 aa33.48■■■□□ 2.95
CDK18-203ENST00000429964 RAD54L2Q9Y4B4 1467 aa33.47■■■□□ 2.95
CDK18-203ENST00000429964 RAPGEF2Q9Y4G8 1499 aa33.44■■■□□ 2.94
CDK18-203ENST00000429964 WDR97A6NE52 1622 aa33.4■■■□□ 2.94
CDK18-203ENST00000429964 CEP162Q5TB80 1403 aa33.39■■■□□ 2.94
CDK18-203ENST00000429964 ERCC6Q03468 1493 aa33.37■■■□□ 2.93
CDK18-203ENST00000429964 IGF1RP08069 1367 aa33.37■■■□□ 2.93
CDK18-203ENST00000429964 WDR62O43379 1518 aa33.32■■■□□ 2.92
CDK18-203ENST00000429964 TARBP1Q13395 1621 aaKnown RBP33.26■■■□□ 2.92
CDK18-203ENST00000429964 CARMIL1Q5VZK9 1371 aa33.23■■■□□ 2.91
CDK18-203ENST00000429964 ABCA5Q8WWZ7 1642 aa33.23■■■□□ 2.91
CDK18-203ENST00000429964 THOC2Q8NI27 1593 aaKnown RBP33.18■■■□□ 2.9
CDK18-203ENST00000429964 CUL7Q14999 1698 aa33.18■■■□□ 2.9
CDK18-203ENST00000429964 GAPVD1Q14C86 1478 aa33.15■■■□□ 2.9
CDK18-203ENST00000429964 TDRD9Q8NDG6 1382 aaKnown RBP33.15■■■□□ 2.9
CDK18-203ENST00000429964 CLIP1P30622 1438 aa33.14■■■□□ 2.89
CDK18-203ENST00000429964 IFT140Q96RY7 1462 aa33.12■■■□□ 2.89
CDK18-203ENST00000429964 PBRM1Q86U86 1689 aa32.99■■■□□ 2.87
CDK18-203ENST00000429964 AQRO60306 1485 aaKnown RBP eCLIP32.92■■■□□ 2.861e-7■■■□□ 16.7
CDK18-203ENST00000429964 RANGAP1P46060 587 aaPredicted RBP32.9■■■□□ 2.86
CDK18-203ENST00000429964 GRIN2BQ13224 1484 aa32.89■■■□□ 2.86
CDK18-203ENST00000429964 ZNF608Q9ULD9 1512 aaPredicted RBP32.87■■■□□ 2.85
CDK18-203ENST00000429964 VPS8Q8N3P4 1428 aa32.86■■■□□ 2.85
CDK18-203ENST00000429964 TRIM26Q12899 539 aaPredicted RBP32.86■■■□□ 2.85
CDK18-203ENST00000429964 CTTNBP2Q8WZ74 1663 aa32.83■■■□□ 2.85
CDK18-203ENST00000429964 PCGF6Q9BYE7 350 aa32.82■■■□□ 2.84
CDK18-203ENST00000429964 FHAD1B1AJZ9 1412 aa32.81■■■□□ 2.84
CDK18-203ENST00000429964 EIF4G3O43432 1585 aaKnown RBP32.8■■■□□ 2.84
CDK18-203ENST00000429964 ADAMTS12P58397 1594 aa32.79■■■□□ 2.84
CDK18-203ENST00000429964 ARAP1Q96P48 1450 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms