RNA–Protein interactions for RNA: ENST00000008440.9

SPRTN-201, Transcript of SprT-like N-terminal domain, humanhuman

TSL 2 BASIC

Gene SPRTN, Length 1,667 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRTN-201ENST00000008440 NISCHQ9Y2I1 1504 aa50.61■■■■■ 5.69
SPRTN-201ENST00000008440 CCDC180Q9P1Z9 1646 aa44.68■■■■■ 4.74
SPRTN-201ENST00000008440 ABCC9O60706 1549 aa43.11■■■■■ 4.49
SPRTN-201ENST00000008440 ZCCHC6Q5VYS8 1495 aaKnown RBP42.3■■■■■ 4.36
SPRTN-201ENST00000008440 DCAF8L2P0C7V8 631 aa42.12■■■■■ 4.33
SPRTN-201ENST00000008440 DCAF1Q9Y4B6 1507 aa41.81■■■■■ 4.28
SPRTN-201ENST00000008440 NACADO15069 1562 aa41.8■■■■■ 4.28
SPRTN-201ENST00000008440 RB1CC1Q8TDY2 1594 aa41.7■■■■■ 4.27
SPRTN-201ENST00000008440 MYO15BQ96JP2 1530 aa41.7■■■■■ 4.27
SPRTN-201ENST00000008440 UNC13AQ9UPW8 1703 aa40.96■■■■■ 4.15
SPRTN-201ENST00000008440 SCRIBQ14160 1630 aa40.93■■■■■ 4.14
SPRTN-201ENST00000008440 SHROOM4Q9ULL8 1493 aa40.56■■■■■ 4.08
SPRTN-201ENST00000008440 BICRAQ9NZM4 1560 aa40.47■■■■■ 4.07
SPRTN-201ENST00000008440 PABPN1Q86U42 306 aaKnown RBP eCLIP40.42■■■■■ 4.06
SPRTN-201ENST00000008440 CECR2Q9BXF3 1484 aa39.41■■■■□ 3.9
SPRTN-201ENST00000008440 EIF4G1Q04637 1599 aaKnown RBP39.33■■■■□ 3.89
SPRTN-201ENST00000008440 BAZ1AQ9NRL2 1556 aaPredicted RBP39.17■■■■□ 3.86
SPRTN-201ENST00000008440 SMARCA4P51532 1647 aa39.16■■■■□ 3.86
SPRTN-201ENST00000008440 MROH2BQ7Z745 1585 aa39.07■■■■□ 3.84
SPRTN-201ENST00000008440 CC2D2AQ9P2K1 1620 aa39.03■■■■□ 3.84
SPRTN-201ENST00000008440 DNAJC5BQ9UF47 199 aa38.93■■■■□ 3.82
SPRTN-201ENST00000008440 RSF1Q96T23 1441 aaPredicted RBP38.83■■■■□ 3.81
SPRTN-201ENST00000008440 WIZO95785 1651 aa38.75■■■■□ 3.79
SPRTN-201ENST00000008440 ATAD2BQ9ULI0 1458 aa38.72■■■■□ 3.79
SPRTN-201ENST00000008440 SMARCA2P51531 1590 aa38.69■■■■□ 3.78
SPRTN-201ENST00000008440 PEG3Q9GZU2 1588 aa38.69■■■■□ 3.78
SPRTN-201ENST00000008440 NCAPD3P42695 1498 aa38.54■■■■□ 3.76
SPRTN-201ENST00000008440 SUPT5HO00267 1087 aaKnown RBP38.51■■■■□ 3.76
SPRTN-201ENST00000008440 BAZ1BQ9UIG0 1483 aaKnown RBP38.45■■■■□ 3.75
SPRTN-201ENST00000008440 HMGXB3Q12766 1538 aa38.43■■■■□ 3.74
SPRTN-201ENST00000008440 TOP2AP11388 1531 aaKnown RBP38.27■■■■□ 3.72
SPRTN-201ENST00000008440 CCDC88BA6NC98 1476 aa37.84■■■■□ 3.65
SPRTN-201ENST00000008440 NESP48681 1621 aa37.54■■■■□ 3.6
SPRTN-201ENST00000008440 CADPSQ9ULU8 1353 aa37.48■■■■□ 3.59
SPRTN-201ENST00000008440 LAMC3Q9Y6N6 1575 aa37.45■■■■□ 3.59
SPRTN-201ENST00000008440 CFTRP13569 1480 aa37.41■■■■□ 3.58
SPRTN-201ENST00000008440 PRDM2Q13029 1718 aa37.33■■■■□ 3.57
SPRTN-201ENST00000008440 KIF21AQ7Z4S6 1674 aa37.17■■■■□ 3.54
SPRTN-201ENST00000008440 PDS5BQ9NTI5 1447 aa37.15■■■■□ 3.54
SPRTN-201ENST00000008440 FANCD2Q9BXW9 1451 aa37.09■■■■□ 3.53
SPRTN-201ENST00000008440 ERCC6Q03468 1493 aa37.06■■■■□ 3.52
SPRTN-201ENST00000008440 CEP164Q9UPV0 1460 aa36.97■■■■□ 3.51
SPRTN-201ENST00000008440 THOC2Q8NI27 1593 aaKnown RBP36.78■■■■□ 3.48
SPRTN-201ENST00000008440 ABCC8Q09428 1581 aa36.77■■■■□ 3.48
SPRTN-201ENST00000008440 MRC2Q9UBG0 1479 aa36.75■■■■□ 3.47
SPRTN-201ENST00000008440 URB2Q14146 1524 aaKnown RBP36.7■■■■□ 3.46
SPRTN-201ENST00000008440 WDR62O43379 1518 aa36.61■■■■□ 3.45
SPRTN-201ENST00000008440 CUX1P39880 1505 aa36.6■■■■□ 3.45
SPRTN-201ENST00000008440 DNMBPQ6XZF7 1577 aa36.6■■■■□ 3.45
SPRTN-201ENST00000008440 WRNQ14191 1432 aaPredicted RBP eCLIP36.59■■■■□ 3.45
SPRTN-201ENST00000008440 TOPBP1Q92547 1522 aa36.59■■■■□ 3.45
SPRTN-201ENST00000008440 SYNJ1O43426 1573 aa36.54■■■■□ 3.44
SPRTN-201ENST00000008440 BIVM-ERCC5R4GMW8 1640 aa36.47■■■■□ 3.43
SPRTN-201ENST00000008440 TOP2BQ02880 1626 aa36.46■■■■□ 3.43
SPRTN-201ENST00000008440 FGD5Q6ZNL6 1462 aa36.35■■■■□ 3.41
SPRTN-201ENST00000008440 POLA1P09884 1462 aaPredicted RBP36.33■■■■□ 3.41
SPRTN-201ENST00000008440 CUX2O14529 1486 aa36.32■■■■□ 3.4
SPRTN-201ENST00000008440 CHIC1Q5VXU3 224 aa36.29■■■■□ 3.4
SPRTN-201ENST00000008440 TRIM41Q8WV44 630 aa36.26■■■■□ 3.4
SPRTN-201ENST00000008440 RAD54L2Q9Y4B4 1467 aa36.2■■■■□ 3.39
SPRTN-201ENST00000008440 SOGA1O94964 1423 aa36.17■■■■□ 3.38
SPRTN-201ENST00000008440 TARBP1Q13395 1621 aaKnown RBP36.16■■■■□ 3.38
SPRTN-201ENST00000008440 IFT140Q96RY7 1462 aa36.12■■■■□ 3.37
SPRTN-201ENST00000008440 WDR97A6NE52 1622 aa36.06■■■■□ 3.36
SPRTN-201ENST00000008440 ZNF608Q9ULD9 1512 aaPredicted RBP36■■■■□ 3.35
SPRTN-201ENST00000008440 ABCA10Q8WWZ4 1543 aa35.99■■■■□ 3.35
SPRTN-201ENST00000008440 TDRD9Q8NDG6 1382 aaKnown RBP35.93■■■■□ 3.34
SPRTN-201ENST00000008440 EIF4G3O43432 1585 aaKnown RBP35.89■■■■□ 3.34
SPRTN-201ENST00000008440 AQRO60306 1485 aaKnown RBP eCLIP35.88■■■■□ 3.33
SPRTN-201ENST00000008440 ABCA5Q8WWZ7 1642 aa35.83■■■■□ 3.33
SPRTN-201ENST00000008440 GAPVD1Q14C86 1478 aa35.77■■■■□ 3.32
SPRTN-201ENST00000008440 RUSC2Q8N2Y8 1516 aa35.77■■■■□ 3.32
SPRTN-201ENST00000008440 PBRM1Q86U86 1689 aa35.76■■■■□ 3.32
SPRTN-201ENST00000008440 KIF27Q86VH2 1401 aa35.75■■■■□ 3.31
SPRTN-201ENST00000008440 GRIN2BQ13224 1484 aa35.64■■■■□ 3.3
SPRTN-201ENST00000008440 FAM9AQ8IZU1 332 aaPredicted RBP35.6■■■■□ 3.29
SPRTN-201ENST00000008440 ERICH3Q5RHP9 1530 aa35.57■■■■□ 3.28
SPRTN-201ENST00000008440 SNAPC4Q5SXM2 1469 aa35.54■■■■□ 3.28
SPRTN-201ENST00000008440 IGF1RP08069 1367 aa35.52■■■■□ 3.28
SPRTN-201ENST00000008440 EEA1Q15075 1411 aa35.49■■■■□ 3.27
SPRTN-201ENST00000008440 MAGI1Q96QZ7 1491 aaPredicted RBP35.46■■■■□ 3.27
SPRTN-201ENST00000008440 ADAMTS12P58397 1594 aa35.43■■■■□ 3.26
SPRTN-201ENST00000008440 CUL7Q14999 1698 aa35.43■■■■□ 3.26
SPRTN-201ENST00000008440 CSRNP3Q8WYN3 585 aa35.41■■■■□ 3.26
SPRTN-201ENST00000008440 CHD1O14646 1710 aa35.38■■■■□ 3.25
SPRTN-201ENST00000008440 FBLN2P98095 1184 aa35.35■■■■□ 3.25
SPRTN-201ENST00000008440 FHAD1B1AJZ9 1412 aa35.35■■■■□ 3.25
SPRTN-201ENST00000008440 CARMIL1Q5VZK9 1371 aa35.34■■■■□ 3.25
SPRTN-201ENST00000008440 SYNJ2O15056 1496 aa35.33■■■■□ 3.25
SPRTN-201ENST00000008440 CHMP7Q8WUX9 453 aaPredicted RBP35.29■■■■□ 3.24
SPRTN-201ENST00000008440 PRXQ9BXM0 1461 aa35.25■■■■□ 3.23
SPRTN-201ENST00000008440 GRIN2AQ12879 1464 aa35.22■■■■□ 3.23
SPRTN-201ENST00000008440 RAPGEF2Q9Y4G8 1499 aa35.21■■■■□ 3.23
SPRTN-201ENST00000008440 EHMT2Q96KQ7 1210 aa35.17■■■■□ 3.22
SPRTN-201ENST00000008440 KIF21BO75037 1637 aa35.16■■■■□ 3.22
SPRTN-201ENST00000008440 CEP170Q5SW79 1584 aa35.06■■■■□ 3.2
SPRTN-201ENST00000008440 OSCARQ8IYS5 282 aa35■■■■□ 3.19
SPRTN-201ENST00000008440 GOLGA3Q08378 1498 aa34.99■■■■□ 3.19
SPRTN-201ENST00000008440 NUP160Q12769 1436 aa34.99■■■■□ 3.19
SPRTN-201ENST00000008440 CTTNBP2Q8WZ74 1663 aa34.96■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms