RNA–Protein interactions for RNA: ENST00000339490.7

PHKA1-201, Transcript of phosphorylase kinase regulatory subunit alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHKA1, Length 6,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHKA1-201ENST00000339490 DCAF8L2P0C7V8 631 aa30.13■■■□□ 2.41
PHKA1-201ENST00000339490 SUPT5HO00267 1087 aaKnown RBP28.71■■■□□ 2.19
PHKA1-201ENST00000339490 SHROOM4Q9ULL8 1493 aa28.14■■■□□ 2.1
PHKA1-201ENST00000339490 NISCHQ9Y2I1 1504 aa28.11■■■□□ 2.09
PHKA1-201ENST00000339490 EHMT2Q96KQ7 1210 aa28.04■■■□□ 2.08
PHKA1-201ENST00000339490 PELP1Q8IZL8 1130 aaKnown RBP27.38■■□□□ 1.97
PHKA1-201ENST00000339490 APLP2Q06481 763 aa27.28■■□□□ 1.96
PHKA1-201ENST00000339490 FAM9AQ8IZU1 332 aaPredicted RBP27.16■■□□□ 1.94
PHKA1-201ENST00000339490 TTBK1Q5TCY1 1321 aaPredicted RBP27.1■■□□□ 1.93
PHKA1-201ENST00000339490 PCGF6Q9BYE7 350 aa26.97■■□□□ 1.91
PHKA1-201ENST00000339490 RANGAP1P46060 587 aaPredicted RBP26.72■■□□□ 1.87
PHKA1-201ENST00000339490 CCER1Q8TC90 406 aaPredicted RBP26.48■■□□□ 1.83
PHKA1-201ENST00000339490 TRIM41Q8WV44 630 aa26.48■■□□□ 1.83
PHKA1-201ENST00000339490 CENPBP07199 599 aaPredicted RBP26.46■■□□□ 1.83
PHKA1-201ENST00000339490 ATP1B4Q9UN42 357 aaPredicted RBP26.42■■□□□ 1.82
PHKA1-201ENST00000339490 ZEB1P37275 1124 aaPredicted RBP26.38■■□□□ 1.81
PHKA1-201ENST00000339490 ERICH6Q7L0X2 663 aa26.38■■□□□ 1.81
PHKA1-201ENST00000339490 UBTFP17480 764 aaKnown RBP26.24■■□□□ 1.79
PHKA1-201ENST00000339490 YTHDC1Q96MU7 727 aaKnown RBP26.1■■□□□ 1.77
PHKA1-201ENST00000339490 PPARGC1BQ86YN6 1023 aaKnown RBP26.03■■□□□ 1.76
PHKA1-201ENST00000339490 NEFLP07196 543 aa25.94■■□□□ 1.74
PHKA1-201ENST00000339490 TRIM26Q12899 539 aaPredicted RBP25.67■■□□□ 1.7
PHKA1-201ENST00000339490 ITGAEP38570 1179 aa25.56■■□□□ 1.68
PHKA1-201ENST00000339490 LOC105371045A0A1W2PR82 267 aa25.46■■□□□ 1.67
PHKA1-201ENST00000339490 HRCP23327 699 aa25.46■■□□□ 1.67
PHKA1-201ENST00000339490 POLR3GLQ9BT43 218 aa25.45■■□□□ 1.66
PHKA1-201ENST00000339490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.39■■□□□ 1.65
PHKA1-201ENST00000339490 HNRNPUL2Q1KMD3 747 aaKnown RBP25.39■■□□□ 1.65
PHKA1-201ENST00000339490 MYT1Q01538 1121 aa25.37■■□□□ 1.65
PHKA1-201ENST00000339490 MYT1LQ9UL68 1186 aa25.35■■□□□ 1.65
PHKA1-201ENST00000339490 CNGB1Q14028 1251 aaPredicted RBP25.28■■□□□ 1.64
PHKA1-201ENST00000339490 CHIC1Q5VXU3 224 aa25.24■■□□□ 1.63
PHKA1-201ENST00000339490 DAXXQ9UER7 740 aaPredicted RBP25.23■■□□□ 1.63
PHKA1-201ENST00000339490 SLC4A1APQ9BWU0 796 aaKnown RBP24.92■■□□□ 1.58
PHKA1-201ENST00000339490 DIEXFQ68CQ4 756 aaKnown RBP24.9■■□□□ 1.58
PHKA1-201ENST00000339490 FAM50AQ14320 339 aaKnown RBP24.82■■□□□ 1.56
PHKA1-201ENST00000339490 CLSPNQ9HAW4 1339 aa24.72■■□□□ 1.55
PHKA1-201ENST00000339490 TRIM52Q96A61 297 aa24.7■■□□□ 1.54
PHKA1-201ENST00000339490 NEUROD1Q13562 356 aa24.69■■□□□ 1.54
PHKA1-201ENST00000339490 ZNF316A6NFI3 1004 aaPredicted RBP24.67■■□□□ 1.54
PHKA1-201ENST00000339490 RTL5Q5HYW3 569 aaPredicted RBP24.64■■□□□ 1.53
PHKA1-201ENST00000339490 BCANQ96GW7 911 aa24.58■■□□□ 1.53
PHKA1-201ENST00000339490 PABPN1Q86U42 306 aaKnown RBP eCLIP24.57■■□□□ 1.52
PHKA1-201ENST00000339490 ZNF326Q5BKZ1 582 aaKnown RBP24.48■■□□□ 1.51
PHKA1-201ENST00000339490 GTF3C3Q9Y5Q9 886 aa24.46■■□□□ 1.51
PHKA1-201ENST00000339490 ANP32CO43423 234 aa24.41■■□□□ 1.5
PHKA1-201ENST00000339490 ABCC9O60706 1549 aa24.39■■□□□ 1.5
PHKA1-201ENST00000339490 CDK11AQ9UQ88 783 aaPredicted RBP24.26■■□□□ 1.47
PHKA1-201ENST00000339490 FBLN2P98095 1184 aa24.25■■□□□ 1.47
PHKA1-201ENST00000339490 P3H3Q8IVL6 736 aa24.19■■□□□ 1.46
PHKA1-201ENST00000339490 ARID3CA6NKF2 412 aa24.17■■□□□ 1.46
PHKA1-201ENST00000339490 BCL11AQ9H165 835 aa24.17■■□□□ 1.46
PHKA1-201ENST00000339490 ZBTB47Q9UFB7 747 aaPredicted RBP24.15■■□□□ 1.46
PHKA1-201ENST00000339490 CANXP27824 592 aaKnown RBP24.11■■□□□ 1.45
PHKA1-201ENST00000339490 SLC24A1O60721 1099 aa24.08■■□□□ 1.45
PHKA1-201ENST00000339490 ACIN1Q9UKV3 1341 aaKnown RBP24.01■■□□□ 1.43
PHKA1-201ENST00000339490 CSRNP3Q8WYN3 585 aa24■■□□□ 1.43
PHKA1-201ENST00000339490 ZNF777Q9ULD5 760 aaPredicted RBP23.98■■□□□ 1.43
PHKA1-201ENST00000339490 NEFMP07197 916 aa23.91■■□□□ 1.42
PHKA1-201ENST00000339490 NPM2Q86SE8 214 aaKnown RBP23.87■■□□□ 1.41
PHKA1-201ENST00000339490 ANP32AP39687 249 aaKnown RBP23.86■■□□□ 1.41
PHKA1-201ENST00000339490 FKBP8Q14318 412 aa23.78■■□□□ 1.4
PHKA1-201ENST00000339490 TONSLQ96HA7 1378 aa23.71■■□□□ 1.39
PHKA1-201ENST00000339490 DDX10Q13206 875 aaKnown RBP23.68■■□□□ 1.38
PHKA1-201ENST00000339490 HNRNPUQ00839 825 aaKnown RBP eCLIP23.68■■□□□ 1.38
PHKA1-201ENST00000339490 FAM9BQ8IZU0 186 aa23.67■■□□□ 1.38
PHKA1-201ENST00000339490 CHGAP10645 457 aaKnown RBP23.66■■□□□ 1.38
PHKA1-201ENST00000339490 SALL2Q9Y467 1007 aaPredicted RBP23.63■■□□□ 1.37
PHKA1-201ENST00000339490 CHIC2Q9UKJ5 165 aa23.56■■□□□ 1.36
PHKA1-201ENST00000339490 STAG3Q9UJ98 1225 aa23.53■■□□□ 1.36
PHKA1-201ENST00000339490 ESF1Q9H501 851 aaKnown RBP23.53■■□□□ 1.36
PHKA1-201ENST00000339490 SCRIBQ14160 1630 aa23.53■■□□□ 1.36
PHKA1-201ENST00000339490 HSP90AA1P07900 732 aaKnown RBP23.53■■□□□ 1.36
PHKA1-201ENST00000339490 PLPPR3Q6T4P5 718 aa23.5■■□□□ 1.35
PHKA1-201ENST00000339490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.47■■□□□ 1.35
PHKA1-201ENST00000339490 DCAF1Q9Y4B6 1507 aa23.47■■□□□ 1.35
PHKA1-201ENST00000339490 UPF2Q9HAU5 1272 aaKnown RBP23.45■■□□□ 1.34
PHKA1-201ENST00000339490 TMC1Q8TDI8 760 aa23.44■■□□□ 1.34
PHKA1-201ENST00000339490 ANP32BQ92688 251 aaKnown RBP23.44■■□□□ 1.34
PHKA1-201ENST00000339490 EIF5BO60841 1220 aaKnown RBP23.43■■□□□ 1.34
PHKA1-201ENST00000339490 CCDC136Q96JN2 1154 aa23.41■■□□□ 1.34
PHKA1-201ENST00000339490 KDM2AQ9Y2K7 1162 aa23.39■■□□□ 1.33
PHKA1-201ENST00000339490 HIRIP3Q9BW71 556 aaPredicted RBP23.37■■□□□ 1.33
PHKA1-201ENST00000339490 NBR1Q14596 966 aa23.35■■□□□ 1.33
PHKA1-201ENST00000339490 MRS2Q9HD23 443 aa23.35■■□□□ 1.33
PHKA1-201ENST00000339490 IRX6P78412 446 aaPredicted RBP23.34■■□□□ 1.33
PHKA1-201ENST00000339490 WDR43Q15061 677 aaKnown RBP eCLIP23.33■■□□□ 1.32
PHKA1-201ENST00000339490 MIER1Q8N108 512 aa23.32■■□□□ 1.32
PHKA1-201ENST00000339490 NPM1P06748 294 aaKnown RBP eCLIP23.31■■□□□ 1.32
PHKA1-201ENST00000339490 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.3■■□□□ 1.32
PHKA1-201ENST00000339490 ARXQ96QS3 562 aa23.27■■□□□ 1.32
PHKA1-201ENST00000339490 TSPY4P0CV99 314 aa23.25■■□□□ 1.31
PHKA1-201ENST00000339490 TSPY10P0CW01 314 aa23.25■■□□□ 1.31
PHKA1-201ENST00000339490 MTUS2Q5JR59 1369 aa23.24■■□□□ 1.31
PHKA1-201ENST00000339490 ZCCHC6Q5VYS8 1495 aaKnown RBP23.21■■□□□ 1.31
PHKA1-201ENST00000339490 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
PHKA1-201ENST00000339490 RRP7BPQ9NSQ0 103 aa23.17■■□□□ 1.3
PHKA1-201ENST00000339490 SENP3Q9H4L4 574 aaPredicted RBP23.16■■□□□ 1.3
PHKA1-201ENST00000339490 CLIP1P30622 1438 aa23.15■■□□□ 1.3
PHKA1-201ENST00000339490 EIF4G2P78344 907 aaKnown RBP eCLIP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms