RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 NISCHQ9Y2I1 1504 aa40.26■■■■■ 4.04
PCDHGB3-202ENST00000618934 SHROOM4Q9ULL8 1493 aa34.39■■■■□ 3.1
PCDHGB3-202ENST00000618934 CCDC180Q9P1Z9 1646 aa34.18■■■■□ 3.06
PCDHGB3-202ENST00000618934 ZCCHC6Q5VYS8 1495 aaKnown RBP34.03■■■■□ 3.04
PCDHGB3-202ENST00000618934 SUPT5HO00267 1087 aaKnown RBP33.67■■■□□ 2.98
PCDHGB3-202ENST00000618934 DCAF8L2P0C7V8 631 aa33.47■■■□□ 2.95
PCDHGB3-202ENST00000618934 DCAF1Q9Y4B6 1507 aa32.96■■■□□ 2.87
PCDHGB3-202ENST00000618934 CHIC1Q5VXU3 224 aa32.71■■■□□ 2.83
PCDHGB3-202ENST00000618934 MYO15BQ96JP2 1530 aa32.63■■■□□ 2.81
PCDHGB3-202ENST00000618934 SCRIBQ14160 1630 aa32.14■■■□□ 2.74
PCDHGB3-202ENST00000618934 ABCC9O60706 1549 aa32.09■■■□□ 2.73
PCDHGB3-202ENST00000618934 RSF1Q96T23 1441 aaPredicted RBP31.88■■■□□ 2.69
PCDHGB3-202ENST00000618934 LOC105371045A0A1W2PR82 267 aa31.81■■■□□ 2.68
PCDHGB3-202ENST00000618934 PCGF6Q9BYE7 350 aa31.63■■■□□ 2.65
PCDHGB3-202ENST00000618934 NACADO15069 1562 aa31.62■■■□□ 2.65
PCDHGB3-202ENST00000618934 HRCP23327 699 aa31.55■■■□□ 2.64
PCDHGB3-202ENST00000618934 RB1CC1Q8TDY2 1594 aa31.54■■■□□ 2.64
PCDHGB3-202ENST00000618934 CECR2Q9BXF3 1484 aa31.5■■■□□ 2.63
PCDHGB3-202ENST00000618934 MROH2BQ7Z745 1585 aa31.36■■■□□ 2.61
PCDHGB3-202ENST00000618934 TRIM41Q8WV44 630 aa31.3■■■□□ 2.6
PCDHGB3-202ENST00000618934 WIZO95785 1651 aa31.2■■■□□ 2.58
PCDHGB3-202ENST00000618934 FAM9AQ8IZU1 332 aaPredicted RBP31.14■■■□□ 2.57
PCDHGB3-202ENST00000618934 PPARGC1BQ86YN6 1023 aaKnown RBP31.04■■■□□ 2.56
PCDHGB3-202ENST00000618934 TRIM26Q12899 539 aaPredicted RBP30.97■■■□□ 2.55
PCDHGB3-202ENST00000618934 EHMT2Q96KQ7 1210 aa30.93■■■□□ 2.54
PCDHGB3-202ENST00000618934 BAZ1AQ9NRL2 1556 aaPredicted RBP30.9■■■□□ 2.54
PCDHGB3-202ENST00000618934 UNC13AQ9UPW8 1703 aa30.79■■■□□ 2.52
PCDHGB3-202ENST00000618934 EIF4G1Q04637 1599 aaKnown RBP30.72■■■□□ 2.51
PCDHGB3-202ENST00000618934 SMARCA4P51532 1647 aa30.68■■■□□ 2.5
PCDHGB3-202ENST00000618934 TOP2AP11388 1531 aaKnown RBP30.61■■■□□ 2.49
PCDHGB3-202ENST00000618934 CCDC88BA6NC98 1476 aa30.55■■■□□ 2.48
PCDHGB3-202ENST00000618934 PABPN1Q86U42 306 aaKnown RBP eCLIP30.49■■■□□ 2.47
PCDHGB3-202ENST00000618934 SMARCA2P51531 1590 aa30.49■■■□□ 2.47
PCDHGB3-202ENST00000618934 ABCC8Q09428 1581 aa30.49■■■□□ 2.47
PCDHGB3-202ENST00000618934 BICRAQ9NZM4 1560 aa30.4■■■□□ 2.46
PCDHGB3-202ENST00000618934 SOGA1O94964 1423 aa30.19■■■□□ 2.42
PCDHGB3-202ENST00000618934 ZEB1P37275 1124 aaPredicted RBP30.15■■■□□ 2.42
PCDHGB3-202ENST00000618934 RUSC2Q8N2Y8 1516 aa30.09■■■□□ 2.41
PCDHGB3-202ENST00000618934 PEG3Q9GZU2 1588 aa30.05■■■□□ 2.4
PCDHGB3-202ENST00000618934 CEP162Q5TB80 1403 aa29.96■■■□□ 2.39
PCDHGB3-202ENST00000618934 CSRNP3Q8WYN3 585 aa29.96■■■□□ 2.39
PCDHGB3-202ENST00000618934 ATAD2BQ9ULI0 1458 aa29.91■■■□□ 2.38
PCDHGB3-202ENST00000618934 WRNQ14191 1432 aaPredicted RBP eCLIP29.9■■■□□ 2.38
PCDHGB3-202ENST00000618934 TNIKQ9UKE5 1360 aa29.9■■■□□ 2.38
PCDHGB3-202ENST00000618934 TTBK1Q5TCY1 1321 aaPredicted RBP29.89■■■□□ 2.38
PCDHGB3-202ENST00000618934 EEA1Q15075 1411 aa29.85■■■□□ 2.37
PCDHGB3-202ENST00000618934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.84■■■□□ 2.37
PCDHGB3-202ENST00000618934 UBTFP17480 764 aaKnown RBP29.84■■■□□ 2.37
PCDHGB3-202ENST00000618934 SYNJ1O43426 1573 aa29.82■■■□□ 2.36
PCDHGB3-202ENST00000618934 BAZ1BQ9UIG0 1483 aaKnown RBP29.8■■■□□ 2.36
PCDHGB3-202ENST00000618934 GOLGA3Q08378 1498 aa29.71■■■□□ 2.35
PCDHGB3-202ENST00000618934 CCER1Q8TC90 406 aaPredicted RBP29.67■■■□□ 2.34
PCDHGB3-202ENST00000618934 CEP164Q9UPV0 1460 aa29.54■■■□□ 2.32
PCDHGB3-202ENST00000618934 KIF21BO75037 1637 aa29.52■■■□□ 2.32
PCDHGB3-202ENST00000618934 RAPGEF2Q9Y4G8 1499 aa29.44■■■□□ 2.3
PCDHGB3-202ENST00000618934 CLIP1P30622 1438 aa29.4■■■□□ 2.3
PCDHGB3-202ENST00000618934 TOP2BQ02880 1626 aa29.4■■■□□ 2.3
PCDHGB3-202ENST00000618934 RANGAP1P46060 587 aaPredicted RBP29.34■■■□□ 2.29
PCDHGB3-202ENST00000618934 NCAPD3P42695 1498 aa29.31■■■□□ 2.28
PCDHGB3-202ENST00000618934 BIVM-ERCC5R4GMW8 1640 aa29.29■■■□□ 2.28
PCDHGB3-202ENST00000618934 HMGXB3Q12766 1538 aa29.26■■■□□ 2.28
PCDHGB3-202ENST00000618934 VPS8Q8N3P4 1428 aa29.25■■■□□ 2.27
PCDHGB3-202ENST00000618934 HNRNPUL2Q1KMD3 747 aaKnown RBP29.19■■■□□ 2.26
PCDHGB3-202ENST00000618934 CUX1P39880 1505 aa29.18■■■□□ 2.26
PCDHGB3-202ENST00000618934 PRXQ9BXM0 1461 aa29.11■■■□□ 2.25
PCDHGB3-202ENST00000618934 CFTRP13569 1480 aa29.07■■■□□ 2.24
PCDHGB3-202ENST00000618934 SCAF1Q9H7N4 1312 aaKnown RBP29.07■■■□□ 2.24
PCDHGB3-202ENST00000618934 APLP2Q06481 763 aa29.06■■■□□ 2.24
PCDHGB3-202ENST00000618934 DIEXFQ68CQ4 756 aaKnown RBP29.06■■■□□ 2.24
PCDHGB3-202ENST00000618934 ERICH3Q5RHP9 1530 aa29.03■■■□□ 2.24
PCDHGB3-202ENST00000618934 ARAP1Q96P48 1450 aa28.98■■■□□ 2.23
PCDHGB3-202ENST00000618934 KIF27Q86VH2 1401 aa28.95■■■□□ 2.22
PCDHGB3-202ENST00000618934 KANK4Q5T7N3 995 aaPredicted RBP28.88■■■□□ 2.21
PCDHGB3-202ENST00000618934 ZNF316A6NFI3 1004 aaPredicted RBP28.86■■■□□ 2.21
PCDHGB3-202ENST00000618934 NEUROD1Q13562 356 aa28.81■■■□□ 2.2
PCDHGB3-202ENST00000618934 PRDM2Q13029 1718 aa28.8■■■□□ 2.2
PCDHGB3-202ENST00000618934 ACIN1Q9UKV3 1341 aaKnown RBP28.76■■■□□ 2.19
PCDHGB3-202ENST00000618934 CADPSQ9ULU8 1353 aa28.76■■■□□ 2.19
PCDHGB3-202ENST00000618934 CUX2O14529 1486 aa28.74■■■□□ 2.19
PCDHGB3-202ENST00000618934 ARHGAP35Q9NRY4 1499 aa28.74■■■□□ 2.19
PCDHGB3-202ENST00000618934 IGF1RP08069 1367 aa28.73■■■□□ 2.19
PCDHGB3-202ENST00000618934 FGD5Q6ZNL6 1462 aa28.65■■■□□ 2.18
PCDHGB3-202ENST00000618934 CC2D2AQ9P2K1 1620 aa28.64■■■□□ 2.18
PCDHGB3-202ENST00000618934 DHX57Q6P158 1386 aaKnown RBP28.57■■■□□ 2.16
PCDHGB3-202ENST00000618934 CARMIL1Q5VZK9 1371 aa28.57■■■□□ 2.16
PCDHGB3-202ENST00000618934 RRBP1Q9P2E9 1410 aaKnown RBP28.57■■■□□ 2.16
PCDHGB3-202ENST00000618934 MIER1Q8N108 512 aa28.51■■■□□ 2.15
PCDHGB3-202ENST00000618934 CENPBP07199 599 aaPredicted RBP28.5■■■□□ 2.15
PCDHGB3-202ENST00000618934 FANCD2Q9BXW9 1451 aa28.49■■■□□ 2.15
PCDHGB3-202ENST00000618934 CCNB3Q8WWL7 1395 aa28.46■■■□□ 2.15
PCDHGB3-202ENST00000618934 GTF3C3Q9Y5Q9 886 aa28.46■■■□□ 2.15
PCDHGB3-202ENST00000618934 ITGAEP38570 1179 aa28.44■■■□□ 2.14
PCDHGB3-202ENST00000618934 PELP1Q8IZL8 1130 aaKnown RBP28.44■■■□□ 2.14
PCDHGB3-202ENST00000618934 RAD54L2Q9Y4B4 1467 aa28.42■■■□□ 2.14
PCDHGB3-202ENST00000618934 YTHDC1Q96MU7 727 aaKnown RBP28.41■■■□□ 2.14
PCDHGB3-202ENST00000618934 CLSPNQ9HAW4 1339 aa28.41■■■□□ 2.14
PCDHGB3-202ENST00000618934 NESP48681 1621 aa28.41■■■□□ 2.14
PCDHGB3-202ENST00000618934 P3H3Q8IVL6 736 aa28.39■■■□□ 2.13
PCDHGB3-202ENST00000618934 TIAM1Q13009 1591 aa28.37■■■□□ 2.13
PCDHGB3-202ENST00000618934 DNMBPQ6XZF7 1577 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms