RNA–Protein interactions for RNA: ENST00000377663.3

KLHL21-202, Transcript of kelch like family member 21, humanhuman

TSL 1 (best) BASIC

Gene KLHL21, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL21-202ENST00000377663 DCAF8L2P0C7V8 631 aa30.37■■■□□ 2.45
KLHL21-202ENST00000377663 SUPT5HO00267 1087 aaKnown RBP28.72■■■□□ 2.19
KLHL21-202ENST00000377663 SHROOM4Q9ULL8 1493 aa28.18■■■□□ 2.1
KLHL21-202ENST00000377663 EHMT2Q96KQ7 1210 aa28.15■■■□□ 2.1
KLHL21-202ENST00000377663 NISCHQ9Y2I1 1504 aa28.04■■■□□ 2.08
KLHL21-202ENST00000377663 APLP2Q06481 763 aa27.43■■□□□ 1.98
KLHL21-202ENST00000377663 PELP1Q8IZL8 1130 aaKnown RBP27.42■■□□□ 1.98
KLHL21-202ENST00000377663 FAM9AQ8IZU1 332 aaPredicted RBP27.21■■□□□ 1.95
KLHL21-202ENST00000377663 TTBK1Q5TCY1 1321 aaPredicted RBP27.19■■□□□ 1.94
KLHL21-202ENST00000377663 RANGAP1P46060 587 aaPredicted RBP26.88■■□□□ 1.89
KLHL21-202ENST00000377663 PCGF6Q9BYE7 350 aa26.83■■□□□ 1.89
KLHL21-202ENST00000377663 ATP1B4Q9UN42 357 aaPredicted RBP26.64■■□□□ 1.85
KLHL21-202ENST00000377663 TRIM41Q8WV44 630 aa26.51■■□□□ 1.83
KLHL21-202ENST00000377663 CCER1Q8TC90 406 aaPredicted RBP26.46■■□□□ 1.83
KLHL21-202ENST00000377663 ERICH6Q7L0X2 663 aa26.44■■□□□ 1.82
KLHL21-202ENST00000377663 CENPBP07199 599 aaPredicted RBP26.39■■□□□ 1.81
KLHL21-202ENST00000377663 UBTFP17480 764 aaKnown RBP26.33■■□□□ 1.81
KLHL21-202ENST00000377663 ZEB1P37275 1124 aaPredicted RBP26.28■■□□□ 1.8
KLHL21-202ENST00000377663 YTHDC1Q96MU7 727 aaKnown RBP26.06■■□□□ 1.76
KLHL21-202ENST00000377663 PPARGC1BQ86YN6 1023 aaKnown RBP26.01■■□□□ 1.75
KLHL21-202ENST00000377663 NEFLP07196 543 aa25.97■■□□□ 1.75
KLHL21-202ENST00000377663 MYT1LQ9UL68 1186 aa25.67■■□□□ 1.7
KLHL21-202ENST00000377663 ITGAEP38570 1179 aa25.66■■□□□ 1.7
KLHL21-202ENST00000377663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.62■■□□□ 1.69
KLHL21-202ENST00000377663 HNRNPUL2Q1KMD3 747 aaKnown RBP25.62■■□□□ 1.69
KLHL21-202ENST00000377663 POLR3GLQ9BT43 218 aa25.6■■□□□ 1.69
KLHL21-202ENST00000377663 TRIM26Q12899 539 aaPredicted RBP25.53■■□□□ 1.68
KLHL21-202ENST00000377663 CNGB1Q14028 1251 aaPredicted RBP25.4■■□□□ 1.66
KLHL21-202ENST00000377663 DAXXQ9UER7 740 aaPredicted RBP25.33■■□□□ 1.65
KLHL21-202ENST00000377663 LOC105371045A0A1W2PR82 267 aa25.32■■□□□ 1.64
KLHL21-202ENST00000377663 CHIC1Q5VXU3 224 aa25.32■■□□□ 1.64
KLHL21-202ENST00000377663 HRCP23327 699 aa25.26■■□□□ 1.63
KLHL21-202ENST00000377663 SLC4A1APQ9BWU0 796 aaKnown RBP25.16■■□□□ 1.62
KLHL21-202ENST00000377663 MYT1Q01538 1121 aa25.12■■□□□ 1.61
KLHL21-202ENST00000377663 FAM50AQ14320 339 aaKnown RBP24.92■■□□□ 1.58
KLHL21-202ENST00000377663 CLSPNQ9HAW4 1339 aa24.82■■□□□ 1.56
KLHL21-202ENST00000377663 TRIM52Q96A61 297 aa24.82■■□□□ 1.56
KLHL21-202ENST00000377663 DIEXFQ68CQ4 756 aaKnown RBP24.77■■□□□ 1.56
KLHL21-202ENST00000377663 ZNF316A6NFI3 1004 aaPredicted RBP24.75■■□□□ 1.55
KLHL21-202ENST00000377663 PABPN1Q86U42 306 aaKnown RBP eCLIP24.74■■□□□ 1.55
KLHL21-202ENST00000377663 NEUROD1Q13562 356 aa24.74■■□□□ 1.55
KLHL21-202ENST00000377663 RTL5Q5HYW3 569 aaPredicted RBP24.63■■□□□ 1.53
KLHL21-202ENST00000377663 ZNF326Q5BKZ1 582 aaKnown RBP24.6■■□□□ 1.53
KLHL21-202ENST00000377663 ABCC9O60706 1549 aa24.57■■□□□ 1.52
KLHL21-202ENST00000377663 FBLN2P98095 1184 aa24.51■■□□□ 1.51
KLHL21-202ENST00000377663 BCANQ96GW7 911 aa24.51■■□□□ 1.51
KLHL21-202ENST00000377663 ANP32CO43423 234 aa24.41■■□□□ 1.5
KLHL21-202ENST00000377663 SLC24A1O60721 1099 aa24.35■■□□□ 1.49
KLHL21-202ENST00000377663 BCL11AQ9H165 835 aa24.34■■□□□ 1.49
KLHL21-202ENST00000377663 ZBTB47Q9UFB7 747 aaPredicted RBP24.33■■□□□ 1.49
KLHL21-202ENST00000377663 ARID3CA6NKF2 412 aa24.33■■□□□ 1.49
KLHL21-202ENST00000377663 P3H3Q8IVL6 736 aa24.28■■□□□ 1.48
KLHL21-202ENST00000377663 GTF3C3Q9Y5Q9 886 aa24.25■■□□□ 1.47
KLHL21-202ENST00000377663 CANXP27824 592 aaKnown RBP24.24■■□□□ 1.47
KLHL21-202ENST00000377663 CDK11AQ9UQ88 783 aaPredicted RBP24.22■■□□□ 1.47
KLHL21-202ENST00000377663 ZNF777Q9ULD5 760 aaPredicted RBP24.13■■□□□ 1.45
KLHL21-202ENST00000377663 NEFMP07197 916 aa24.1■■□□□ 1.45
KLHL21-202ENST00000377663 CSRNP3Q8WYN3 585 aa23.96■■□□□ 1.43
KLHL21-202ENST00000377663 NPM2Q86SE8 214 aaKnown RBP23.87■■□□□ 1.41
KLHL21-202ENST00000377663 CHGAP10645 457 aaKnown RBP23.86■■□□□ 1.41
KLHL21-202ENST00000377663 PLPPR3Q6T4P5 718 aa23.85■■□□□ 1.41
KLHL21-202ENST00000377663 ESF1Q9H501 851 aaKnown RBP23.85■■□□□ 1.41
KLHL21-202ENST00000377663 ANP32AP39687 249 aaKnown RBP23.83■■□□□ 1.41
KLHL21-202ENST00000377663 STAG3Q9UJ98 1225 aa23.8■■□□□ 1.4
KLHL21-202ENST00000377663 ACIN1Q9UKV3 1341 aaKnown RBP23.76■■□□□ 1.39
KLHL21-202ENST00000377663 TONSLQ96HA7 1378 aa23.73■■□□□ 1.39
KLHL21-202ENST00000377663 FKBP8Q14318 412 aa23.67■■□□□ 1.38
KLHL21-202ENST00000377663 SALL2Q9Y467 1007 aaPredicted RBP23.66■■□□□ 1.38
KLHL21-202ENST00000377663 FAM9BQ8IZU0 186 aa23.66■■□□□ 1.38
KLHL21-202ENST00000377663 HNRNPUQ00839 825 aaKnown RBP eCLIP23.63■■□□□ 1.37
KLHL21-202ENST00000377663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.62■■□□□ 1.375e-7■■□□□ 12.5
KLHL21-202ENST00000377663 CHIC2Q9UKJ5 165 aa23.62■■□□□ 1.37
KLHL21-202ENST00000377663 DDX10Q13206 875 aaKnown RBP23.61■■□□□ 1.37
KLHL21-202ENST00000377663 HSP90AA1P07900 732 aaKnown RBP23.61■■□□□ 1.37
KLHL21-202ENST00000377663 SCRIBQ14160 1630 aa23.61■■□□□ 1.37
KLHL21-202ENST00000377663 NPM1P06748 294 aaKnown RBP eCLIP23.6■■□□□ 1.37
KLHL21-202ENST00000377663 UPF2Q9HAU5 1272 aaKnown RBP23.5■■□□□ 1.35
KLHL21-202ENST00000377663 ANP32BQ92688 251 aaKnown RBP23.5■■□□□ 1.35
KLHL21-202ENST00000377663 KDM2AQ9Y2K7 1162 aa23.47■■□□□ 1.35
KLHL21-202ENST00000377663 TMC1Q8TDI8 760 aa23.46■■□□□ 1.35
KLHL21-202ENST00000377663 WDR43Q15061 677 aaKnown RBP eCLIP23.41■■□□□ 1.343e-6■■■■□ 20.8
KLHL21-202ENST00000377663 SCAF1Q9H7N4 1312 aaKnown RBP23.39■■□□□ 1.33
KLHL21-202ENST00000377663 CCDC136Q96JN2 1154 aa23.37■■□□□ 1.33
KLHL21-202ENST00000377663 SENP3Q9H4L4 574 aaPredicted RBP23.36■■□□□ 1.33
KLHL21-202ENST00000377663 TSPY4P0CV99 314 aa23.36■■□□□ 1.33
KLHL21-202ENST00000377663 TSPY10P0CW01 314 aa23.36■■□□□ 1.33
KLHL21-202ENST00000377663 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.34■■□□□ 1.33
KLHL21-202ENST00000377663 EIF5BO60841 1220 aaKnown RBP23.34■■□□□ 1.33
KLHL21-202ENST00000377663 MRS2Q9HD23 443 aa23.33■■□□□ 1.32
KLHL21-202ENST00000377663 HIRIP3Q9BW71 556 aaPredicted RBP23.31■■□□□ 1.32
KLHL21-202ENST00000377663 MTUS2Q5JR59 1369 aa23.31■■□□□ 1.32
KLHL21-202ENST00000377663 ARXQ96QS3 562 aa23.28■■□□□ 1.32
KLHL21-202ENST00000377663 PLEKHG5O94827 1062 aa23.28■■□□□ 1.32
KLHL21-202ENST00000377663 CHMP7Q8WUX9 453 aaPredicted RBP23.28■■□□□ 1.32
KLHL21-202ENST00000377663 A0A0G2JS52 829 aa23.27■■□□□ 1.32
KLHL21-202ENST00000377663 NBR1Q14596 966 aa23.27■■□□□ 1.32
KLHL21-202ENST00000377663 ZBTB7CA1YPR0 619 aa23.26■■□□□ 1.31
KLHL21-202ENST00000377663 IRX6P78412 446 aaPredicted RBP23.26■■□□□ 1.31
KLHL21-202ENST00000377663 DCAF1Q9Y4B6 1507 aa23.25■■□□□ 1.31
KLHL21-202ENST00000377663 RRP7BPQ9NSQ0 103 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms