RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 NISCHQ9Y2I1 1504 aa42.07■■■■■ 4.33
SMARCD2-212ENST00000613943 CCDC180Q9P1Z9 1646 aa35.84■■■■□ 3.33
SMARCD2-212ENST00000613943 SHROOM4Q9ULL8 1493 aa35.79■■■■□ 3.32
SMARCD2-212ENST00000613943 ZCCHC6Q5VYS8 1495 aaKnown RBP35.51■■■■□ 3.28
SMARCD2-212ENST00000613943 DCAF8L2P0C7V8 631 aa35.2■■■■□ 3.22
SMARCD2-212ENST00000613943 SUPT5HO00267 1087 aaKnown RBP34.88■■■■□ 3.17
SMARCD2-212ENST00000613943 DCAF1Q9Y4B6 1507 aa34.41■■■■□ 3.1
SMARCD2-212ENST00000613943 ABCC9O60706 1549 aa33.76■■■□□ 2.99
SMARCD2-212ENST00000613943 SCRIBQ14160 1630 aa33.72■■■□□ 2.99
SMARCD2-212ENST00000613943 CHIC1Q5VXU3 224 aa33.63■■■□□ 2.97
SMARCD2-212ENST00000613943 MYO15BQ96JP2 1530 aa33.54■■■□□ 2.96
SMARCD2-212ENST00000613943 NACADO15069 1562 aa33.27■■■□□ 2.92
SMARCD2-212ENST00000613943 RSF1Q96T23 1441 aaPredicted RBP33.19■■■□□ 2.9
SMARCD2-212ENST00000613943 CECR2Q9BXF3 1484 aa32.95■■■□□ 2.86
SMARCD2-212ENST00000613943 RB1CC1Q8TDY2 1594 aa32.83■■■□□ 2.85
SMARCD2-212ENST00000613943 MROH2BQ7Z745 1585 aa32.75■■■□□ 2.83
SMARCD2-212ENST00000613943 LOC105371045A0A1W2PR82 267 aa32.72■■■□□ 2.83
SMARCD2-212ENST00000613943 WIZO95785 1651 aa32.55■■■□□ 2.8
SMARCD2-212ENST00000613943 TRIM41Q8WV44 630 aa32.44■■■□□ 2.78
SMARCD2-212ENST00000613943 UNC13AQ9UPW8 1703 aa32.36■■■□□ 2.77
SMARCD2-212ENST00000613943 BAZ1AQ9NRL2 1556 aaPredicted RBP32.31■■■□□ 2.76
SMARCD2-212ENST00000613943 FAM9AQ8IZU1 332 aaPredicted RBP32.28■■■□□ 2.76
SMARCD2-212ENST00000613943 PABPN1Q86U42 306 aaKnown RBP eCLIP32.27■■■□□ 2.761e-8■■■■■ 27
SMARCD2-212ENST00000613943 PCGF6Q9BYE7 350 aa32.25■■■□□ 2.75
SMARCD2-212ENST00000613943 SMARCA4P51532 1647 aa32.12■■■□□ 2.73
SMARCD2-212ENST00000613943 EHMT2Q96KQ7 1210 aa32.11■■■□□ 2.73
SMARCD2-212ENST00000613943 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
SMARCD2-212ENST00000613943 TOP2AP11388 1531 aaKnown RBP31.97■■■□□ 2.71
SMARCD2-212ENST00000613943 CCDC88BA6NC98 1476 aa31.88■■■□□ 2.69
SMARCD2-212ENST00000613943 EIF4G1Q04637 1599 aaKnown RBP31.88■■■□□ 2.69
SMARCD2-212ENST00000613943 HRCP23327 699 aa31.87■■■□□ 2.69
SMARCD2-212ENST00000613943 SMARCA2P51531 1590 aa31.81■■■□□ 2.68
SMARCD2-212ENST00000613943 ABCC8Q09428 1581 aa31.73■■■□□ 2.67
SMARCD2-212ENST00000613943 TRIM26Q12899 539 aaPredicted RBP31.61■■■□□ 2.65
SMARCD2-212ENST00000613943 PEG3Q9GZU2 1588 aa31.46■■■□□ 2.63
SMARCD2-212ENST00000613943 PPARGC1BQ86YN6 1023 aaKnown RBP31.45■■■□□ 2.63
SMARCD2-212ENST00000613943 ATAD2BQ9ULI0 1458 aa31.42■■■□□ 2.62
SMARCD2-212ENST00000613943 SOGA1O94964 1423 aa31.36■■■□□ 2.61
SMARCD2-212ENST00000613943 BAZ1BQ9UIG0 1483 aaKnown RBP31.31■■■□□ 2.6
SMARCD2-212ENST00000613943 RUSC2Q8N2Y8 1516 aa31.25■■■□□ 2.59
SMARCD2-212ENST00000613943 WRNQ14191 1432 aaPredicted RBP eCLIP31.18■■■□□ 2.583e-6■■■■□ 26.3
SMARCD2-212ENST00000613943 CSRNP3Q8WYN3 585 aa31.08■■■□□ 2.57
SMARCD2-212ENST00000613943 SYNJ1O43426 1573 aa31.06■■■□□ 2.56
SMARCD2-212ENST00000613943 UBTFP17480 764 aaKnown RBP30.98■■■□□ 2.55
SMARCD2-212ENST00000613943 CEP162Q5TB80 1403 aa30.98■■■□□ 2.55
SMARCD2-212ENST00000613943 TTBK1Q5TCY1 1321 aaPredicted RBP30.95■■■□□ 2.55
SMARCD2-212ENST00000613943 EEA1Q15075 1411 aa30.94■■■□□ 2.54
SMARCD2-212ENST00000613943 TNIKQ9UKE5 1360 aa30.89■■■□□ 2.54
SMARCD2-212ENST00000613943 NCAPD3P42695 1498 aa30.84■■■□□ 2.53
SMARCD2-212ENST00000613943 GOLGA3Q08378 1498 aa30.8■■■□□ 2.52
SMARCD2-212ENST00000613943 HMGXB3Q12766 1538 aa30.76■■■□□ 2.52
SMARCD2-212ENST00000613943 CEP164Q9UPV0 1460 aa30.66■■■□□ 2.5
SMARCD2-212ENST00000613943 TOP2BQ02880 1626 aa30.64■■■□□ 2.5
SMARCD2-212ENST00000613943 ZEB1P37275 1124 aaPredicted RBP30.62■■■□□ 2.49
SMARCD2-212ENST00000613943 RANGAP1P46060 587 aaPredicted RBP30.62■■■□□ 2.49
SMARCD2-212ENST00000613943 RAPGEF2Q9Y4G8 1499 aa30.59■■■□□ 2.49
SMARCD2-212ENST00000613943 KIF21BO75037 1637 aa30.58■■■□□ 2.49
SMARCD2-212ENST00000613943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.57■■■□□ 2.48
SMARCD2-212ENST00000613943 BIVM-ERCC5R4GMW8 1640 aa30.51■■■□□ 2.47
SMARCD2-212ENST00000613943 CFTRP13569 1480 aa30.5■■■□□ 2.47
SMARCD2-212ENST00000613943 CUX1P39880 1505 aa30.5■■■□□ 2.47
SMARCD2-212ENST00000613943 CLIP1P30622 1438 aa30.48■■■□□ 2.47
SMARCD2-212ENST00000613943 CCER1Q8TC90 406 aaPredicted RBP30.39■■■□□ 2.46
SMARCD2-212ENST00000613943 CC2D2AQ9P2K1 1620 aa30.33■■■□□ 2.45
SMARCD2-212ENST00000613943 PRXQ9BXM0 1461 aa30.27■■■□□ 2.44
SMARCD2-212ENST00000613943 VPS8Q8N3P4 1428 aa30.26■■■□□ 2.43
SMARCD2-212ENST00000613943 CADPSQ9ULU8 1353 aa30.26■■■□□ 2.43
SMARCD2-212ENST00000613943 KIF27Q86VH2 1401 aa30.22■■■□□ 2.43
SMARCD2-212ENST00000613943 ERICH3Q5RHP9 1530 aa30.15■■■□□ 2.42
SMARCD2-212ENST00000613943 APLP2Q06481 763 aa30.12■■■□□ 2.41
SMARCD2-212ENST00000613943 PRDM2Q13029 1718 aa30.1■■■□□ 2.41
SMARCD2-212ENST00000613943 HNRNPUL2Q1KMD3 747 aaKnown RBP30.1■■■□□ 2.41
SMARCD2-212ENST00000613943 CUX2O14529 1486 aa30.08■■■□□ 2.41
SMARCD2-212ENST00000613943 ARAP1Q96P48 1450 aa30.04■■■□□ 2.4
SMARCD2-212ENST00000613943 FGD5Q6ZNL6 1462 aa30.03■■■□□ 2.4
SMARCD2-212ENST00000613943 NESP48681 1621 aa29.99■■■□□ 2.39
SMARCD2-212ENST00000613943 FANCD2Q9BXW9 1451 aa29.98■■■□□ 2.39
SMARCD2-212ENST00000613943 IGF1RP08069 1367 aa29.98■■■□□ 2.39
SMARCD2-212ENST00000613943 KANK4Q5T7N3 995 aaPredicted RBP29.91■■■□□ 2.38
SMARCD2-212ENST00000613943 DNAJC5BQ9UF47 199 aa29.88■■■□□ 2.37
SMARCD2-212ENST00000613943 ARHGAP35Q9NRY4 1499 aa29.85■■■□□ 2.37
SMARCD2-212ENST00000613943 CARMIL1Q5VZK9 1371 aa29.84■■■□□ 2.37
SMARCD2-212ENST00000613943 RAD54L2Q9Y4B4 1467 aa29.83■■■□□ 2.37
SMARCD2-212ENST00000613943 TOPBP1Q92547 1522 aa29.74■■■□□ 2.35
SMARCD2-212ENST00000613943 POLA1P09884 1462 aaPredicted RBP29.73■■■□□ 2.35
SMARCD2-212ENST00000613943 DNMBPQ6XZF7 1577 aa29.72■■■□□ 2.35
SMARCD2-212ENST00000613943 P3H3Q8IVL6 736 aa29.65■■■□□ 2.34
SMARCD2-212ENST00000613943 ABCA10Q8WWZ4 1543 aa29.6■■■□□ 2.33
SMARCD2-212ENST00000613943 URB2Q14146 1524 aaKnown RBP29.59■■■□□ 2.33
SMARCD2-212ENST00000613943 LAMC3Q9Y6N6 1575 aa29.54■■■□□ 2.32
SMARCD2-212ENST00000613943 DIEXFQ68CQ4 756 aaKnown RBP29.54■■■□□ 2.32
SMARCD2-212ENST00000613943 ITGAEP38570 1179 aa29.5■■■□□ 2.31
SMARCD2-212ENST00000613943 TDRD9Q8NDG6 1382 aaKnown RBP29.5■■■□□ 2.31
SMARCD2-212ENST00000613943 ATP1B4Q9UN42 357 aaPredicted RBP29.49■■■□□ 2.31
SMARCD2-212ENST00000613943 RRBP1Q9P2E9 1410 aaKnown RBP29.47■■■□□ 2.31
SMARCD2-212ENST00000613943 FHOD3Q2V2M9 1422 aa29.43■■■□□ 2.3
SMARCD2-212ENST00000613943 CCNB3Q8WWL7 1395 aa29.43■■■□□ 2.3
SMARCD2-212ENST00000613943 PDS5BQ9NTI5 1447 aa29.42■■■□□ 2.3
SMARCD2-212ENST00000613943 TIAM1Q13009 1591 aa29.41■■■□□ 2.3
SMARCD2-212ENST00000613943 ZNF316A6NFI3 1004 aaPredicted RBP29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms