RNA–Protein interactions for RNA: ENST00000622669.4

MFSD1-219, Transcript of major facilitator superfamily domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene MFSD1, Length 2,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD1-219ENST00000622669 NISCHQ9Y2I1 1504 aa41.37■■■■■ 4.21
MFSD1-219ENST00000622669 CCDC180Q9P1Z9 1646 aa35.32■■■■□ 3.24
MFSD1-219ENST00000622669 SHROOM4Q9ULL8 1493 aa35.03■■■■□ 3.2
MFSD1-219ENST00000622669 ZCCHC6Q5VYS8 1495 aaKnown RBP34.97■■■■□ 3.19
MFSD1-219ENST00000622669 DCAF8L2P0C7V8 631 aa34.22■■■■□ 3.07
MFSD1-219ENST00000622669 SUPT5HO00267 1087 aaKnown RBP34.19■■■■□ 3.06
MFSD1-219ENST00000622669 DCAF1Q9Y4B6 1507 aa33.96■■■■□ 3.03
MFSD1-219ENST00000622669 CHIC1Q5VXU3 224 aa33.18■■■□□ 2.9
MFSD1-219ENST00000622669 MYO15BQ96JP2 1530 aa33.06■■■□□ 2.88
MFSD1-219ENST00000622669 SCRIBQ14160 1630 aa33.04■■■□□ 2.88
MFSD1-219ENST00000622669 ABCC9O60706 1549 aa32.96■■■□□ 2.87
MFSD1-219ENST00000622669 NACADO15069 1562 aa32.67■■■□□ 2.82
MFSD1-219ENST00000622669 RSF1Q96T23 1441 aaPredicted RBP32.63■■■□□ 2.81
MFSD1-219ENST00000622669 RB1CC1Q8TDY2 1594 aa32.3■■■□□ 2.76
MFSD1-219ENST00000622669 CECR2Q9BXF3 1484 aa32.29■■■□□ 2.76
MFSD1-219ENST00000622669 LOC105371045A0A1W2PR82 267 aa32.17■■■□□ 2.74
MFSD1-219ENST00000622669 MROH2BQ7Z745 1585 aa32.16■■■□□ 2.74
MFSD1-219ENST00000622669 WIZO95785 1651 aa31.99■■■□□ 2.71
MFSD1-219ENST00000622669 TRIM41Q8WV44 630 aa31.87■■■□□ 2.69
MFSD1-219ENST00000622669 PCGF6Q9BYE7 350 aa31.85■■■□□ 2.69
MFSD1-219ENST00000622669 UNC13AQ9UPW8 1703 aa31.8■■■□□ 2.68
MFSD1-219ENST00000622669 BAZ1AQ9NRL2 1556 aaPredicted RBP31.78■■■□□ 2.68
MFSD1-219ENST00000622669 HRCP23327 699 aa31.69■■■□□ 2.66
MFSD1-219ENST00000622669 FAM9AQ8IZU1 332 aaPredicted RBP31.6■■■□□ 2.65
MFSD1-219ENST00000622669 SMARCA4P51532 1647 aa31.58■■■□□ 2.65
MFSD1-219ENST00000622669 EIF4G1Q04637 1599 aaKnown RBP31.5■■■□□ 2.63
MFSD1-219ENST00000622669 TOP2AP11388 1531 aaKnown RBP31.47■■■□□ 2.63
MFSD1-219ENST00000622669 BICRAQ9NZM4 1560 aa31.39■■■□□ 2.61
MFSD1-219ENST00000622669 PABPN1Q86U42 306 aaKnown RBP eCLIP31.35■■■□□ 2.61
MFSD1-219ENST00000622669 EHMT2Q96KQ7 1210 aa31.33■■■□□ 2.61
MFSD1-219ENST00000622669 CCDC88BA6NC98 1476 aa31.32■■■□□ 2.6
MFSD1-219ENST00000622669 SMARCA2P51531 1590 aa31.31■■■□□ 2.6
MFSD1-219ENST00000622669 TRIM26Q12899 539 aaPredicted RBP31.3■■■□□ 2.6
MFSD1-219ENST00000622669 ABCC8Q09428 1581 aa31.18■■■□□ 2.58
MFSD1-219ENST00000622669 PPARGC1BQ86YN6 1023 aaKnown RBP31.11■■■□□ 2.57
MFSD1-219ENST00000622669 PEG3Q9GZU2 1588 aa30.99■■■□□ 2.55
MFSD1-219ENST00000622669 SOGA1O94964 1423 aa30.81■■■□□ 2.52
MFSD1-219ENST00000622669 ATAD2BQ9ULI0 1458 aa30.8■■■□□ 2.52
MFSD1-219ENST00000622669 RUSC2Q8N2Y8 1516 aa30.7■■■□□ 2.5
MFSD1-219ENST00000622669 BAZ1BQ9UIG0 1483 aaKnown RBP30.68■■■□□ 2.5
MFSD1-219ENST00000622669 WRNQ14191 1432 aaPredicted RBP eCLIP30.64■■■□□ 2.49
MFSD1-219ENST00000622669 EEA1Q15075 1411 aa30.56■■■□□ 2.48
MFSD1-219ENST00000622669 SYNJ1O43426 1573 aa30.56■■■□□ 2.48
MFSD1-219ENST00000622669 CSRNP3Q8WYN3 585 aa30.55■■■□□ 2.48
MFSD1-219ENST00000622669 CEP162Q5TB80 1403 aa30.54■■■□□ 2.48
MFSD1-219ENST00000622669 TNIKQ9UKE5 1360 aa30.49■■■□□ 2.47
MFSD1-219ENST00000622669 ZEB1P37275 1124 aaPredicted RBP30.44■■■□□ 2.46
MFSD1-219ENST00000622669 UBTFP17480 764 aaKnown RBP30.37■■■□□ 2.45
MFSD1-219ENST00000622669 GOLGA3Q08378 1498 aa30.37■■■□□ 2.45
MFSD1-219ENST00000622669 TTBK1Q5TCY1 1321 aaPredicted RBP30.26■■■□□ 2.43
MFSD1-219ENST00000622669 HMGXB3Q12766 1538 aa30.23■■■□□ 2.43
MFSD1-219ENST00000622669 NCAPD3P42695 1498 aa30.23■■■□□ 2.43
MFSD1-219ENST00000622669 KIF21BO75037 1637 aa30.23■■■□□ 2.43
MFSD1-219ENST00000622669 CEP164Q9UPV0 1460 aa30.22■■■□□ 2.43
MFSD1-219ENST00000622669 TOP2BQ02880 1626 aa30.19■■■□□ 2.42
MFSD1-219ENST00000622669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.13■■■□□ 2.41
MFSD1-219ENST00000622669 BIVM-ERCC5R4GMW8 1640 aa30.1■■■□□ 2.41
MFSD1-219ENST00000622669 RAPGEF2Q9Y4G8 1499 aa30.08■■■□□ 2.41
MFSD1-219ENST00000622669 CLIP1P30622 1438 aa30.01■■■□□ 2.39
MFSD1-219ENST00000622669 CCER1Q8TC90 406 aaPredicted RBP29.98■■■□□ 2.39
MFSD1-219ENST00000622669 CUX1P39880 1505 aa29.96■■■□□ 2.39
MFSD1-219ENST00000622669 CFTRP13569 1480 aa29.94■■■□□ 2.38
MFSD1-219ENST00000622669 VPS8Q8N3P4 1428 aa29.86■■■□□ 2.37
MFSD1-219ENST00000622669 RANGAP1P46060 587 aaPredicted RBP29.84■■■□□ 2.37
MFSD1-219ENST00000622669 PRXQ9BXM0 1461 aa29.82■■■□□ 2.36
MFSD1-219ENST00000622669 ERICH3Q5RHP9 1530 aa29.78■■■□□ 2.36
MFSD1-219ENST00000622669 PRDM2Q13029 1718 aa29.73■■■□□ 2.35
MFSD1-219ENST00000622669 KIF27Q86VH2 1401 aa29.69■■■□□ 2.34
MFSD1-219ENST00000622669 CC2D2AQ9P2K1 1620 aa29.63■■■□□ 2.33
MFSD1-219ENST00000622669 CADPSQ9ULU8 1353 aa29.62■■■□□ 2.33
MFSD1-219ENST00000622669 ARAP1Q96P48 1450 aa29.61■■■□□ 2.33
MFSD1-219ENST00000622669 APLP2Q06481 763 aa29.59■■■□□ 2.33
MFSD1-219ENST00000622669 HNRNPUL2Q1KMD3 747 aaKnown RBP29.57■■■□□ 2.32
MFSD1-219ENST00000622669 CUX2O14529 1486 aa29.49■■■□□ 2.31
MFSD1-219ENST00000622669 FGD5Q6ZNL6 1462 aa29.44■■■□□ 2.3
MFSD1-219ENST00000622669 IGF1RP08069 1367 aa29.42■■■□□ 2.3
MFSD1-219ENST00000622669 ARHGAP35Q9NRY4 1499 aa29.39■■■□□ 2.3
MFSD1-219ENST00000622669 KANK4Q5T7N3 995 aaPredicted RBP29.38■■■□□ 2.29
MFSD1-219ENST00000622669 FANCD2Q9BXW9 1451 aa29.35■■■□□ 2.29
MFSD1-219ENST00000622669 CARMIL1Q5VZK9 1371 aa29.27■■■□□ 2.28
MFSD1-219ENST00000622669 DIEXFQ68CQ4 756 aaKnown RBP29.26■■■□□ 2.27
MFSD1-219ENST00000622669 NESP48681 1621 aa29.25■■■□□ 2.27
MFSD1-219ENST00000622669 DNMBPQ6XZF7 1577 aa29.19■■■□□ 2.26
MFSD1-219ENST00000622669 RAD54L2Q9Y4B4 1467 aa29.18■■■□□ 2.26
MFSD1-219ENST00000622669 TOPBP1Q92547 1522 aa29.16■■■□□ 2.26
MFSD1-219ENST00000622669 RRBP1Q9P2E9 1410 aaKnown RBP29.14■■■□□ 2.25
MFSD1-219ENST00000622669 POLA1P09884 1462 aaPredicted RBP29.13■■■□□ 2.25
MFSD1-219ENST00000622669 ZNF316A6NFI3 1004 aaPredicted RBP29.12■■■□□ 2.25
MFSD1-219ENST00000622669 ABCA10Q8WWZ4 1543 aa29.09■■■□□ 2.25
MFSD1-219ENST00000622669 SCAF1Q9H7N4 1312 aaKnown RBP29.05■■■□□ 2.24
MFSD1-219ENST00000622669 TIAM1Q13009 1591 aa29.02■■■□□ 2.24
MFSD1-219ENST00000622669 DHX57Q6P158 1386 aaKnown RBP29.02■■■□□ 2.24
MFSD1-219ENST00000622669 CCNB3Q8WWL7 1395 aa29■■■□□ 2.23
MFSD1-219ENST00000622669 LAMC3Q9Y6N6 1575 aa28.98■■■□□ 2.23
MFSD1-219ENST00000622669 URB2Q14146 1524 aaKnown RBP28.98■■■□□ 2.23
MFSD1-219ENST00000622669 DNAJC5BQ9UF47 199 aa28.96■■■□□ 2.23
MFSD1-219ENST00000622669 MAP3K1Q13233 1512 aa28.95■■■□□ 2.22
MFSD1-219ENST00000622669 P3H3Q8IVL6 736 aa28.95■■■□□ 2.22
MFSD1-219ENST00000622669 PCF11O94913 1555 aaKnown RBP28.91■■■□□ 2.22
MFSD1-219ENST00000622669 WDR97A6NE52 1622 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms