RNA–Protein interactions for RNA: ENST00000441947.1

LINC00315-201, long intergenic non-protein coding RNA 315, humanhuman

TSL 5 BASIC

Gene LINC00315, Length 2,323 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00315-201ENST00000441947 NISCHQ9Y2I1 1504 aa39.55■■■■□ 3.92
LINC00315-201ENST00000441947 CCDC180Q9P1Z9 1646 aa33.72■■■□□ 2.99
LINC00315-201ENST00000441947 SHROOM4Q9ULL8 1493 aa33.55■■■□□ 2.96
LINC00315-201ENST00000441947 ZCCHC6Q5VYS8 1495 aaKnown RBP33.51■■■□□ 2.96
LINC00315-201ENST00000441947 SUPT5HO00267 1087 aaKnown RBP32.91■■■□□ 2.86
LINC00315-201ENST00000441947 DCAF1Q9Y4B6 1507 aa32.55■■■□□ 2.8
LINC00315-201ENST00000441947 DCAF8L2P0C7V8 631 aa32.43■■■□□ 2.78
LINC00315-201ENST00000441947 CHIC1Q5VXU3 224 aa32.15■■■□□ 2.74
LINC00315-201ENST00000441947 MYO15BQ96JP2 1530 aa32.12■■■□□ 2.73
LINC00315-201ENST00000441947 ABCC9O60706 1549 aa32.04■■■□□ 2.72
LINC00315-201ENST00000441947 SCRIBQ14160 1630 aa31.47■■■□□ 2.63
LINC00315-201ENST00000441947 HRCP23327 699 aa31.31■■■□□ 2.6
LINC00315-201ENST00000441947 RSF1Q96T23 1441 aaPredicted RBP31.28■■■□□ 2.6
LINC00315-201ENST00000441947 NACADO15069 1562 aa31.21■■■□□ 2.59
LINC00315-201ENST00000441947 PCGF6Q9BYE7 350 aa31.14■■■□□ 2.58
LINC00315-201ENST00000441947 LOC105371045A0A1W2PR82 267 aa31.11■■■□□ 2.57
LINC00315-201ENST00000441947 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
LINC00315-201ENST00000441947 CECR2Q9BXF3 1484 aa30.77■■■□□ 2.52
LINC00315-201ENST00000441947 MROH2BQ7Z745 1585 aa30.72■■■□□ 2.51
LINC00315-201ENST00000441947 TRIM41Q8WV44 630 aa30.7■■■□□ 2.5
LINC00315-201ENST00000441947 TRIM26Q12899 539 aaPredicted RBP30.62■■■□□ 2.49
LINC00315-201ENST00000441947 WIZO95785 1651 aa30.59■■■□□ 2.49
LINC00315-201ENST00000441947 PPARGC1BQ86YN6 1023 aaKnown RBP30.55■■■□□ 2.48
LINC00315-201ENST00000441947 BAZ1AQ9NRL2 1556 aaPredicted RBP30.48■■■□□ 2.47
LINC00315-201ENST00000441947 UNC13AQ9UPW8 1703 aa30.39■■■□□ 2.46
LINC00315-201ENST00000441947 FAM9AQ8IZU1 332 aaPredicted RBP30.37■■■□□ 2.45
LINC00315-201ENST00000441947 EIF4G1Q04637 1599 aaKnown RBP30.33■■■□□ 2.45
LINC00315-201ENST00000441947 PABPN1Q86U42 306 aaKnown RBP eCLIP30.23■■■□□ 2.43
LINC00315-201ENST00000441947 TOP2AP11388 1531 aaKnown RBP30.15■■■□□ 2.42
LINC00315-201ENST00000441947 SMARCA4P51532 1647 aa30.14■■■□□ 2.42
LINC00315-201ENST00000441947 BICRAQ9NZM4 1560 aa30.09■■■□□ 2.41
LINC00315-201ENST00000441947 EHMT2Q96KQ7 1210 aa30.02■■■□□ 2.4
LINC00315-201ENST00000441947 ZEB1P37275 1124 aaPredicted RBP30.01■■■□□ 2.4
LINC00315-201ENST00000441947 SMARCA2P51531 1590 aa29.98■■■□□ 2.39
LINC00315-201ENST00000441947 CCDC88BA6NC98 1476 aa29.95■■■□□ 2.38
LINC00315-201ENST00000441947 ABCC8Q09428 1581 aa29.89■■■□□ 2.37
LINC00315-201ENST00000441947 PEG3Q9GZU2 1588 aa29.61■■■□□ 2.33
LINC00315-201ENST00000441947 WRNQ14191 1432 aaPredicted RBP eCLIP29.59■■■□□ 2.33
LINC00315-201ENST00000441947 SOGA1O94964 1423 aa29.58■■■□□ 2.33
LINC00315-201ENST00000441947 EEA1Q15075 1411 aa29.55■■■□□ 2.32
LINC00315-201ENST00000441947 CEP162Q5TB80 1403 aa29.52■■■□□ 2.32
LINC00315-201ENST00000441947 TNIKQ9UKE5 1360 aa29.49■■■□□ 2.31
LINC00315-201ENST00000441947 RUSC2Q8N2Y8 1516 aa29.44■■■□□ 2.3
LINC00315-201ENST00000441947 CSRNP3Q8WYN3 585 aa29.39■■■□□ 2.3
LINC00315-201ENST00000441947 GOLGA3Q08378 1498 aa29.32■■■□□ 2.28
LINC00315-201ENST00000441947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.31■■■□□ 2.28
LINC00315-201ENST00000441947 SYNJ1O43426 1573 aa29.29■■■□□ 2.28
LINC00315-201ENST00000441947 ATAD2BQ9ULI0 1458 aa29.29■■■□□ 2.28
LINC00315-201ENST00000441947 CCER1Q8TC90 406 aaPredicted RBP29.24■■■□□ 2.27
LINC00315-201ENST00000441947 KIF21BO75037 1637 aa29.2■■■□□ 2.27
LINC00315-201ENST00000441947 UBTFP17480 764 aaKnown RBP29.2■■■□□ 2.27
LINC00315-201ENST00000441947 BAZ1BQ9UIG0 1483 aaKnown RBP29.2■■■□□ 2.26
LINC00315-201ENST00000441947 CEP164Q9UPV0 1460 aa29.15■■■□□ 2.26
LINC00315-201ENST00000441947 TTBK1Q5TCY1 1321 aaPredicted RBP29.11■■■□□ 2.25
LINC00315-201ENST00000441947 TOP2BQ02880 1626 aa28.96■■■□□ 2.23
LINC00315-201ENST00000441947 CLIP1P30622 1438 aa28.94■■■□□ 2.22
LINC00315-201ENST00000441947 CC2D2AQ9P2K1 1620 aa28.91■■■□□ 2.22
LINC00315-201ENST00000441947 BIVM-ERCC5R4GMW8 1640 aa28.9■■■□□ 2.22
LINC00315-201ENST00000441947 RAPGEF2Q9Y4G8 1499 aa28.89■■■□□ 2.21
LINC00315-201ENST00000441947 VPS8Q8N3P4 1428 aa28.87■■■□□ 2.21
LINC00315-201ENST00000441947 SCAF1Q9H7N4 1312 aaKnown RBP28.85■■■□□ 2.21
LINC00315-201ENST00000441947 NCAPD3P42695 1498 aa28.82■■■□□ 2.2
LINC00315-201ENST00000441947 HMGXB3Q12766 1538 aa28.79■■■□□ 2.2
LINC00315-201ENST00000441947 DIEXFQ68CQ4 756 aaKnown RBP28.74■■■□□ 2.19
LINC00315-201ENST00000441947 ERICH3Q5RHP9 1530 aa28.71■■■□□ 2.19
LINC00315-201ENST00000441947 PRXQ9BXM0 1461 aa28.65■■■□□ 2.18
LINC00315-201ENST00000441947 CUX1P39880 1505 aa28.62■■■□□ 2.17
LINC00315-201ENST00000441947 HNRNPUL2Q1KMD3 747 aaKnown RBP28.59■■■□□ 2.17
LINC00315-201ENST00000441947 ACIN1Q9UKV3 1341 aaKnown RBP28.59■■■□□ 2.17
LINC00315-201ENST00000441947 APLP2Q06481 763 aa28.58■■■□□ 2.17
LINC00315-201ENST00000441947 DNAJC5BQ9UF47 199 aa28.55■■■□□ 2.16
LINC00315-201ENST00000441947 ZNF316A6NFI3 1004 aaPredicted RBP28.54■■■□□ 2.16
LINC00315-201ENST00000441947 ARAP1Q96P48 1450 aa28.53■■■□□ 2.16
LINC00315-201ENST00000441947 CFTRP13569 1480 aa28.51■■■□□ 2.15
LINC00315-201ENST00000441947 NEUROD1Q13562 356 aa28.51■■■□□ 2.15
LINC00315-201ENST00000441947 RANGAP1P46060 587 aaPredicted RBP28.49■■■□□ 2.15
LINC00315-201ENST00000441947 PRDM2Q13029 1718 aa28.46■■■□□ 2.15
LINC00315-201ENST00000441947 KIF27Q86VH2 1401 aa28.45■■■□□ 2.15
LINC00315-201ENST00000441947 CENPBP07199 599 aaPredicted RBP28.4■■■□□ 2.14
LINC00315-201ENST00000441947 PELP1Q8IZL8 1130 aaKnown RBP28.37■■■□□ 2.13
LINC00315-201ENST00000441947 KANK4Q5T7N3 995 aaPredicted RBP28.26■■■□□ 2.11
LINC00315-201ENST00000441947 ARHGAP35Q9NRY4 1499 aa28.25■■■□□ 2.11
LINC00315-201ENST00000441947 RRBP1Q9P2E9 1410 aaKnown RBP28.23■■■□□ 2.11
LINC00315-201ENST00000441947 CLSPNQ9HAW4 1339 aa28.21■■■□□ 2.11
LINC00315-201ENST00000441947 GTF3C3Q9Y5Q9 886 aa28.2■■■□□ 2.1
LINC00315-201ENST00000441947 DHX57Q6P158 1386 aaKnown RBP28.2■■■□□ 2.1
LINC00315-201ENST00000441947 CUX2O14529 1486 aa28.15■■■□□ 2.1
LINC00315-201ENST00000441947 CADPSQ9ULU8 1353 aa28.12■■■□□ 2.09
LINC00315-201ENST00000441947 IGF1RP08069 1367 aa28.12■■■□□ 2.09
LINC00315-201ENST00000441947 MIER1Q8N108 512 aa28.11■■■□□ 2.09
LINC00315-201ENST00000441947 FGD5Q6ZNL6 1462 aa28.07■■■□□ 2.08
LINC00315-201ENST00000441947 CCNB3Q8WWL7 1395 aa28.04■■■□□ 2.08
LINC00315-201ENST00000441947 MAP3K1Q13233 1512 aa28.02■■■□□ 2.08
LINC00315-201ENST00000441947 NESP48681 1621 aa28.02■■■□□ 2.08
LINC00315-201ENST00000441947 TIAM1Q13009 1591 aa28.01■■■□□ 2.07
LINC00315-201ENST00000441947 CARMIL1Q5VZK9 1371 aa27.99■■■□□ 2.07
LINC00315-201ENST00000441947 YTHDC1Q96MU7 727 aaKnown RBP27.97■■■□□ 2.07
LINC00315-201ENST00000441947 LAMC3Q9Y6N6 1575 aa27.89■■■□□ 2.06
LINC00315-201ENST00000441947 FANCD2Q9BXW9 1451 aa27.87■■■□□ 2.05
LINC00315-201ENST00000441947 CFAP43Q8NDM7 1665 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms