Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CSNK1G3Q9Y6M4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.59■■□□□ 1.69
CSNK1G3Q9Y6M4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CSNK1G3Q9Y6M4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.58■■□□□ 1.69
CSNK1G3Q9Y6M4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CSNK1G3Q9Y6M4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.57■■□□□ 1.68
CSNK1G3Q9Y6M4 HSD17B1P1-201ENST00000590052 955 ntBASIC25.57■■□□□ 1.68
CSNK1G3Q9Y6M4 LINC00273-201ENST00000539813 1452 ntBASIC25.57■■□□□ 1.68
CSNK1G3Q9Y6M4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
CSNK1G3Q9Y6M4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
CSNK1G3Q9Y6M4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CSNK1G3Q9Y6M4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.55■■□□□ 1.68
CSNK1G3Q9Y6M4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.55■■□□□ 1.68
CSNK1G3Q9Y6M4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CSNK1G3Q9Y6M4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CSNK1G3Q9Y6M4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.54■■□□□ 1.68
CSNK1G3Q9Y6M4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CSNK1G3Q9Y6M4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.53■■□□□ 1.68
CSNK1G3Q9Y6M4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CSNK1G3Q9Y6M4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
CSNK1G3Q9Y6M4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CSNK1G3Q9Y6M4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CSNK1G3Q9Y6M4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
CSNK1G3Q9Y6M4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CSNK1G3Q9Y6M4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CSNK1G3Q9Y6M4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CSNK1G3Q9Y6M4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CSNK1G3Q9Y6M4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CSNK1G3Q9Y6M4 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.49■■□□□ 1.67
CSNK1G3Q9Y6M4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.49■■□□□ 1.67
CSNK1G3Q9Y6M4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CSNK1G3Q9Y6M4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CSNK1G3Q9Y6M4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CSNK1G3Q9Y6M4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.47■■□□□ 1.67
CSNK1G3Q9Y6M4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CSNK1G3Q9Y6M4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CSNK1G3Q9Y6M4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CSNK1G3Q9Y6M4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
CSNK1G3Q9Y6M4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CSNK1G3Q9Y6M4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.44■■□□□ 1.66
CSNK1G3Q9Y6M4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
CSNK1G3Q9Y6M4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CSNK1G3Q9Y6M4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.43■■□□□ 1.66
CSNK1G3Q9Y6M4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CSNK1G3Q9Y6M4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.43■■□□□ 1.66
CSNK1G3Q9Y6M4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.43■■□□□ 1.66
CSNK1G3Q9Y6M4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CSNK1G3Q9Y6M4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CSNK1G3Q9Y6M4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
CSNK1G3Q9Y6M4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CSNK1G3Q9Y6M4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CSNK1G3Q9Y6M4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CSNK1G3Q9Y6M4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CSNK1G3Q9Y6M4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.41■■□□□ 1.66
CSNK1G3Q9Y6M4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CSNK1G3Q9Y6M4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CSNK1G3Q9Y6M4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CSNK1G3Q9Y6M4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CSNK1G3Q9Y6M4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CSNK1G3Q9Y6M4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CSNK1G3Q9Y6M4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.4■■□□□ 1.66
CSNK1G3Q9Y6M4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.4■■□□□ 1.66
CSNK1G3Q9Y6M4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CSNK1G3Q9Y6M4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.4■■□□□ 1.66
CSNK1G3Q9Y6M4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CSNK1G3Q9Y6M4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
CSNK1G3Q9Y6M4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.39■■□□□ 1.66
CSNK1G3Q9Y6M4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.38■■□□□ 1.65
CSNK1G3Q9Y6M4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
CSNK1G3Q9Y6M4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.38■■□□□ 1.65
CSNK1G3Q9Y6M4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
CSNK1G3Q9Y6M4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CSNK1G3Q9Y6M4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
CSNK1G3Q9Y6M4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CSNK1G3Q9Y6M4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
CSNK1G3Q9Y6M4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CSNK1G3Q9Y6M4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.36■■□□□ 1.65
CSNK1G3Q9Y6M4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
CSNK1G3Q9Y6M4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CSNK1G3Q9Y6M4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CSNK1G3Q9Y6M4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CSNK1G3Q9Y6M4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.33■■□□□ 1.65
CSNK1G3Q9Y6M4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CSNK1G3Q9Y6M4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
CSNK1G3Q9Y6M4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CSNK1G3Q9Y6M4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
CSNK1G3Q9Y6M4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CSNK1G3Q9Y6M4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.32■■□□□ 1.64
CSNK1G3Q9Y6M4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CSNK1G3Q9Y6M4 AC127502.1-201ENST00000399971 1502 ntBASIC25.32■■□□□ 1.64
CSNK1G3Q9Y6M4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.31■■□□□ 1.64
CSNK1G3Q9Y6M4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.31■■□□□ 1.64
CSNK1G3Q9Y6M4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CSNK1G3Q9Y6M4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CSNK1G3Q9Y6M4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CSNK1G3Q9Y6M4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CSNK1G3Q9Y6M4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CSNK1G3Q9Y6M4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CSNK1G3Q9Y6M4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.29■■□□□ 1.64
CSNK1G3Q9Y6M4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms