Protein–RNA interactions for Protein: Q9Y5F6

PCDHGC5, Protocadherin gamma-C5, humanhuman

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC5Q9Y5F6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHGC5Q9Y5F6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.59■■■□□ 2.17
PCDHGC5Q9Y5F6 ST7-AS1-201ENST00000456775 1889 ntBASIC28.58■■■□□ 2.17
PCDHGC5Q9Y5F6 AC139426.1-201ENST00000568218 2529 ntBASIC28.58■■■□□ 2.17
PCDHGC5Q9Y5F6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
PCDHGC5Q9Y5F6 HSD17B1P1-201ENST00000590052 955 ntBASIC28.58■■■□□ 2.17
PCDHGC5Q9Y5F6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.57■■■□□ 2.16
PCDHGC5Q9Y5F6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHGC5Q9Y5F6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHGC5Q9Y5F6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHGC5Q9Y5F6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHGC5Q9Y5F6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCDHGC5Q9Y5F6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCDHGC5Q9Y5F6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.56■■■□□ 2.16
PCDHGC5Q9Y5F6 LINC01971-201ENST00000617888 1048 ntBASIC28.55■■■□□ 2.16
PCDHGC5Q9Y5F6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.55■■■□□ 2.16
PCDHGC5Q9Y5F6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.55■■■□□ 2.16
PCDHGC5Q9Y5F6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHGC5Q9Y5F6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.55■■■□□ 2.16
PCDHGC5Q9Y5F6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.54■■■□□ 2.16
PCDHGC5Q9Y5F6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
PCDHGC5Q9Y5F6 AL161658.1-201ENST00000623641 1967 ntBASIC28.53■■■□□ 2.16
PCDHGC5Q9Y5F6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.53■■■□□ 2.16
PCDHGC5Q9Y5F6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHGC5Q9Y5F6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHGC5Q9Y5F6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHGC5Q9Y5F6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
PCDHGC5Q9Y5F6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.16
PCDHGC5Q9Y5F6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PCDHGC5Q9Y5F6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.5■■■□□ 2.15
PCDHGC5Q9Y5F6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.5■■■□□ 2.15
PCDHGC5Q9Y5F6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
PCDHGC5Q9Y5F6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.49■■■□□ 2.15
PCDHGC5Q9Y5F6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PCDHGC5Q9Y5F6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.49■■■□□ 2.15
PCDHGC5Q9Y5F6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.49■■■□□ 2.15
PCDHGC5Q9Y5F6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PCDHGC5Q9Y5F6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHGC5Q9Y5F6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHGC5Q9Y5F6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
PCDHGC5Q9Y5F6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.45■■■□□ 2.14
PCDHGC5Q9Y5F6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
PCDHGC5Q9Y5F6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
PCDHGC5Q9Y5F6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
PCDHGC5Q9Y5F6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDHGC5Q9Y5F6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDHGC5Q9Y5F6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCDHGC5Q9Y5F6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCDHGC5Q9Y5F6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCDHGC5Q9Y5F6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.41■■■□□ 2.14
PCDHGC5Q9Y5F6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHGC5Q9Y5F6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHGC5Q9Y5F6 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.41■■■□□ 2.14
PCDHGC5Q9Y5F6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.41■■■□□ 2.14
PCDHGC5Q9Y5F6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHGC5Q9Y5F6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
PCDHGC5Q9Y5F6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCDHGC5Q9Y5F6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCDHGC5Q9Y5F6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
PCDHGC5Q9Y5F6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCDHGC5Q9Y5F6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCDHGC5Q9Y5F6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
PCDHGC5Q9Y5F6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
PCDHGC5Q9Y5F6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHGC5Q9Y5F6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHGC5Q9Y5F6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHGC5Q9Y5F6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHGC5Q9Y5F6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHGC5Q9Y5F6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCDHGC5Q9Y5F6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
PCDHGC5Q9Y5F6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
PCDHGC5Q9Y5F6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCDHGC5Q9Y5F6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCDHGC5Q9Y5F6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHGC5Q9Y5F6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.35■■■□□ 2.13
PCDHGC5Q9Y5F6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHGC5Q9Y5F6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHGC5Q9Y5F6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.35■■■□□ 2.13
PCDHGC5Q9Y5F6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.34■■■□□ 2.13
PCDHGC5Q9Y5F6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDHGC5Q9Y5F6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.12
PCDHGC5Q9Y5F6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHGC5Q9Y5F6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
PCDHGC5Q9Y5F6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.31■■■□□ 2.12
PCDHGC5Q9Y5F6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PCDHGC5Q9Y5F6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
PCDHGC5Q9Y5F6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHGC5Q9Y5F6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
PCDHGC5Q9Y5F6 AL135925.1-201ENST00000605920 1701 ntBASIC28.29■■■□□ 2.12
PCDHGC5Q9Y5F6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHGC5Q9Y5F6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHGC5Q9Y5F6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.29■■■□□ 2.12
PCDHGC5Q9Y5F6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHGC5Q9Y5F6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHGC5Q9Y5F6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHGC5Q9Y5F6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.28■■■□□ 2.12
PCDHGC5Q9Y5F6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.28■■■□□ 2.12
PCDHGC5Q9Y5F6 DUX4L13-201ENST00000554103 1267 ntBASIC28.27■■■□□ 2.12
PCDHGC5Q9Y5F6 DUX4L15-201ENST00000611059 1267 ntBASIC28.27■■■□□ 2.12
PCDHGC5Q9Y5F6 DUX4L23-201ENST00000615195 1269 ntBASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms