Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NPAP1Q9NZP6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NPAP1Q9NZP6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
NPAP1Q9NZP6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
NPAP1Q9NZP6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NPAP1Q9NZP6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
NPAP1Q9NZP6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NPAP1Q9NZP6 AC044849.2-201ENST00000606596 710 ntBASIC23.34■■□□□ 1.33
NPAP1Q9NZP6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NPAP1Q9NZP6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NPAP1Q9NZP6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NPAP1Q9NZP6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.32■■□□□ 1.32
NPAP1Q9NZP6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.32■■□□□ 1.32
NPAP1Q9NZP6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NPAP1Q9NZP6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NPAP1Q9NZP6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.31■■□□□ 1.32
NPAP1Q9NZP6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.31■■□□□ 1.32
NPAP1Q9NZP6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NPAP1Q9NZP6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NPAP1Q9NZP6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
NPAP1Q9NZP6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.3■■□□□ 1.32
NPAP1Q9NZP6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NPAP1Q9NZP6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.3■■□□□ 1.32
NPAP1Q9NZP6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NPAP1Q9NZP6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NPAP1Q9NZP6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NPAP1Q9NZP6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NPAP1Q9NZP6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NPAP1Q9NZP6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NPAP1Q9NZP6 AL121749.1-202ENST00000609313 2153 ntBASIC23.28■■□□□ 1.32
NPAP1Q9NZP6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPAP1Q9NZP6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NPAP1Q9NZP6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NPAP1Q9NZP6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
NPAP1Q9NZP6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.26■■□□□ 1.31
NPAP1Q9NZP6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NPAP1Q9NZP6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.26■■□□□ 1.31
NPAP1Q9NZP6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NPAP1Q9NZP6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NPAP1Q9NZP6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
NPAP1Q9NZP6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NPAP1Q9NZP6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.25■■□□□ 1.31
NPAP1Q9NZP6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.24■■□□□ 1.31
NPAP1Q9NZP6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NPAP1Q9NZP6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NPAP1Q9NZP6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.23■■□□□ 1.31
NPAP1Q9NZP6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.23■■□□□ 1.31
NPAP1Q9NZP6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NPAP1Q9NZP6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NPAP1Q9NZP6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NPAP1Q9NZP6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
NPAP1Q9NZP6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
NPAP1Q9NZP6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
NPAP1Q9NZP6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NPAP1Q9NZP6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NPAP1Q9NZP6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NPAP1Q9NZP6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.19■■□□□ 1.3
NPAP1Q9NZP6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NPAP1Q9NZP6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NPAP1Q9NZP6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NPAP1Q9NZP6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
NPAP1Q9NZP6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NPAP1Q9NZP6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NPAP1Q9NZP6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NPAP1Q9NZP6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.18■■□□□ 1.3
NPAP1Q9NZP6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NPAP1Q9NZP6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.18■■□□□ 1.3
NPAP1Q9NZP6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NPAP1Q9NZP6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
NPAP1Q9NZP6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NPAP1Q9NZP6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NPAP1Q9NZP6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.17■■□□□ 1.3
NPAP1Q9NZP6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NPAP1Q9NZP6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.17■■□□□ 1.3
NPAP1Q9NZP6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPAP1Q9NZP6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
NPAP1Q9NZP6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPAP1Q9NZP6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPAP1Q9NZP6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.16■■□□□ 1.3
NPAP1Q9NZP6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPAP1Q9NZP6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.15■■□□□ 1.3
NPAP1Q9NZP6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.15■■□□□ 1.3
NPAP1Q9NZP6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NPAP1Q9NZP6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NPAP1Q9NZP6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NPAP1Q9NZP6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NPAP1Q9NZP6 ABHD17AP4-201ENST00000411545 909 ntBASIC23.14■■□□□ 1.29
NPAP1Q9NZP6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NPAP1Q9NZP6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NPAP1Q9NZP6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.14■■□□□ 1.29
NPAP1Q9NZP6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
NPAP1Q9NZP6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
NPAP1Q9NZP6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NPAP1Q9NZP6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NPAP1Q9NZP6 ST7-AS1-201ENST00000456775 1889 ntBASIC23.13■■□□□ 1.29
NPAP1Q9NZP6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NPAP1Q9NZP6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.12■■□□□ 1.29
NPAP1Q9NZP6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPAP1Q9NZP6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPAP1Q9NZP6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms