Protein–RNA interactions for Protein: Q9NR30

DDX21, Nucleolar RNA helicase 2, humanhuman

Known RBP eCLIP

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX21Q9NR30 UBAP2-207ENST00000421278 833 ntTSL 56.47□□□□□ -1.373e-8■■□□□ 12.6
DDX21Q9NR30 GSE1-204ENST00000411612 872 ntTSL 528.36■■■□□ 2.134e-6■■□□□ 12.5
DDX21Q9NR30 GSE1-215ENST00000635906 666 ntTSL 315.61■□□□□ 0.094e-6■■□□□ 12.5
DDX21Q9NR30 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.594e-6■■□□□ 12.4
DDX21Q9NR30 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.84■■□□□ 1.894e-7■■□□□ 12.4
DDX21Q9NR30 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.47■■□□□ 1.834e-6■■□□□ 12.4
DDX21Q9NR30 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC25.9■■□□□ 1.744e-6■■□□□ 12.4
DDX21Q9NR30 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.81■■□□□ 1.724e-8■■□□□ 12.4
DDX21Q9NR30 HSP90B1-202ENST00000540297 590 ntTSL 325.79■■□□□ 1.724e-7■■□□□ 12.4
DDX21Q9NR30 RNASET2-204ENST00000421787 1924 ntTSL 225.57■■□□□ 1.684e-6■■□□□ 12.4
DDX21Q9NR30 TPM4-208ENST00000588410 563 ntTSL 425.41■■□□□ 1.664e-7■■□□□ 12.4
DDX21Q9NR30 TPM4-204ENST00000586499 708 ntTSL 424.77■■□□□ 1.564e-7■■□□□ 12.4
DDX21Q9NR30 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC24.02■■□□□ 1.444e-6■■□□□ 12.4
DDX21Q9NR30 RNASET2-201ENST00000028008 1220 ntTSL 523.74■■□□□ 1.394e-6■■□□□ 12.4
DDX21Q9NR30 RNASET2-207ENST00000478180 963 ntTSL 523.39■■□□□ 1.334e-6■■□□□ 12.4
DDX21Q9NR30 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC23.24■■□□□ 1.314e-7■■□□□ 12.4
DDX21Q9NR30 TPM4-206ENST00000587201 877 ntTSL 223.01■■□□□ 1.274e-7■■□□□ 12.4
DDX21Q9NR30 HSP90B1-205ENST00000549334 581 ntTSL 422.53■■□□□ 1.24e-7■■□□□ 12.4
DDX21Q9NR30 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC22.23■■□□□ 1.154e-7■■□□□ 12.4
DDX21Q9NR30 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.124e-8■■□□□ 12.4
DDX21Q9NR30 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.084e-6■■□□□ 12.4
DDX21Q9NR30 RNASET2-202ENST00000358165 2445 ntTSL 220.86■□□□□ 0.934e-6■■□□□ 12.4
DDX21Q9NR30 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.822e-6■■□□□ 12.4
DDX21Q9NR30 ULK1-205ENST00000541761 1262 ntTSL 220.1■□□□□ 0.814e-8■■□□□ 12.4
DDX21Q9NR30 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.37■□□□□ 0.692e-6■■□□□ 12.4
DDX21Q9NR30 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.664e-7■■□□□ 12.4
DDX21Q9NR30 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.624e-7■■□□□ 12.4
DDX21Q9NR30 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.574e-8■■□□□ 12.4
DDX21Q9NR30 TPM4-205ENST00000586833 558 ntTSL 518.2■□□□□ 0.54e-7■■□□□ 12.4
DDX21Q9NR30 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.444e-7■■□□□ 12.4
DDX21Q9NR30 HSP90B1-203ENST00000548462 3032 ntTSL 214.03□□□□□ -0.164e-7■■□□□ 12.4
DDX21Q9NR30 RNASET2-209ENST00000499370 2164 ntTSL 212.87□□□□□ -0.354e-6■■□□□ 12.4
DDX21Q9NR30 RNASET2-208ENST00000496851 881 ntTSL 512.59□□□□□ -0.394e-6■■□□□ 12.4
DDX21Q9NR30 TPM4-210ENST00000588507 367 ntTSL 310.42□□□□□ -0.744e-7■■□□□ 12.4
DDX21Q9NR30 STARD7-204ENST00000479456 2949 ntTSL 27.74□□□□□ -1.174e-7■■□□□ 12.4
DDX21Q9NR30 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.274e-6■■□□□ 12.4
DDX21Q9NR30 C22orf34-202ENST00000400023 1469 ntTSL 1 (best)20.43■□□□□ 0.863e-10■■□□□ 12.4
DDX21Q9NR30 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.231e-6■■□□□ 12
DDX21Q9NR30 COPS5-204ENST00000517793 657 ntTSL 518.14■□□□□ 0.491e-6■■□□□ 12
DDX21Q9NR30 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.41e-6■■□□□ 12
DDX21Q9NR30 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC17.02■□□□□ 0.311e-6■■□□□ 12
DDX21Q9NR30 COPS5-206ENST00000518747 676 ntTSL 315.82■□□□□ 0.121e-6■■□□□ 12
DDX21Q9NR30 ERICH1-207ENST00000522893 3170 ntAPPRIS ALT2 TSL 1 (best)15.53■□□□□ 0.081e-6■■□□□ 12
DDX21Q9NR30 COPS5-205ENST00000518374 1451 ntTSL 213.11□□□□□ -0.311e-6■■□□□ 12
DDX21Q9NR30 COPS5-201ENST00000357849 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.61e-6■■□□□ 12
DDX21Q9NR30 COPS5-213ENST00000523890 1086 ntTSL 311.06□□□□□ -0.641e-6■■□□□ 12
DDX21Q9NR30 COPS5-211ENST00000521509 3826 ntTSL 510.81□□□□□ -0.681e-6■■□□□ 12
DDX21Q9NR30 ERICH1-209ENST00000523415 3630 ntTSL 210.03□□□□□ -0.81e-6■■□□□ 12
DDX21Q9NR30 COPS5-210ENST00000521386 5691 ntTSL 1 (best)8.68□□□□□ -1.021e-6■■□□□ 12
DDX21Q9NR30 HSPA8-211ENST00000527983 1509 ntTSL 1 (best)14.92□□□□□ -0.021e-323■■□□□ 11.8
DDX21Q9NR30 HSPA8-209ENST00000526862 504 ntTSL 35.95□□□□□ -1.461e-323■■□□□ 11.8
DDX21Q9NR30 SNORD14C-201ENST00000365382 88 ntBASIC-0.41□□□□□ -2.481e-323■■□□□ 11.8
DDX21Q9NR30 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.058e-8■■□□□ 11.7
DDX21Q9NR30 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.568e-8■■□□□ 11.7
DDX21Q9NR30 SCARNA9-201ENST00000530422 353 ntBASIC9.26□□□□□ -0.931e-72■■□□□ 11.6
DDX21Q9NR30 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.361e-72■■□□□ 11.6
DDX21Q9NR30 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.44□□□□□ -1.541e-72■■□□□ 11.6
DDX21Q9NR30 CEP295-203ENST00000530425 1735 ntAPPRIS ALT2 TSL 44.02□□□□□ -1.771e-72■■□□□ 11.6
DDX21Q9NR30 ADGRL4-203ENST00000640664 2223 ntTSL 56.52□□□□□ -1.372e-6■■□□□ 11.4
DDX21Q9NR30 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.72e-6■■□□□ 11.4
DDX21Q9NR30 IGFL2-AS1-201ENST00000594027 294 ntTSL 314.1□□□□□ -0.156e-9■□□□□ 11.2
DDX21Q9NR30 IGFL2-AS1-205ENST00000599817 340 ntTSL 213.99□□□□□ -0.176e-9■□□□□ 11.2
DDX21Q9NR30 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC13.52□□□□□ -0.256e-9■□□□□ 11.2
DDX21Q9NR30 CTNND1-238ENST00000534647 866 ntTSL 515.15■□□□□ 0.024e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-235ENST00000533189 498 ntTSL 314.31□□□□□ -0.124e-6■□□□□ 11.2
DDX21Q9NR30 MDH1-202ENST00000409476 808 ntTSL 5 BASIC13.93□□□□□ -0.184e-6■□□□□ 11.2
DDX21Q9NR30 MDH1-203ENST00000409908 700 ntTSL 3 BASIC13.93□□□□□ -0.184e-6■□□□□ 11.2
DDX21Q9NR30 MDH1-216ENST00000544381 1346 ntTSL 2 BASIC12.61□□□□□ -0.394e-6■□□□□ 11.2
DDX21Q9NR30 MDH1-215ENST00000539945 1443 ntTSL 2 BASIC12.13□□□□□ -0.474e-6■□□□□ 11.2
DDX21Q9NR30 MDH1-205ENST00000432309 844 ntTSL 511.97□□□□□ -0.494e-6■□□□□ 11.2
DDX21Q9NR30 MDH1-201ENST00000233114 1650 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.54e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.64e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC10.5□□□□□ -0.734e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC10.48□□□□□ -0.734e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC10.08□□□□□ -0.84e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC10.08□□□□□ -0.84e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.84e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.834e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC9.71□□□□□ -0.864e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC9.71□□□□□ -0.864e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC9.63□□□□□ -0.874e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC9.6□□□□□ -0.874e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC9.56□□□□□ -0.884e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC9.56□□□□□ -0.884e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC9.44□□□□□ -0.94e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC9.22□□□□□ -0.934e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC9.16□□□□□ -0.944e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC9.14□□□□□ -0.954e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC9.12□□□□□ -0.954e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC9.05□□□□□ -0.964e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC9.04□□□□□ -0.964e-6■□□□□ 11.2
DDX21Q9NR30 MDH1-206ENST00000436321 680 ntTSL 38.98□□□□□ -0.974e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.95□□□□□ -0.984e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.95□□□□□ -0.984e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.56□□□□□ -1.044e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.44□□□□□ -1.064e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.28□□□□□ -1.084e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.1□□□□□ -1.114e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.1□□□□□ -1.114e-6■□□□□ 11.2
DDX21Q9NR30 MDH1-211ENST00000484538 910 ntTSL 27.99□□□□□ -1.134e-6■□□□□ 11.2
Retrieved 100 of 1,140 protein–RNA pairs in 92.6 ms