RNA–Protein interactions for RNA: ENST00000530422.1

SCARNA9-201, small Cajal body-specific RNA 9, humanhuman

BASIC

Gene SCARNA9, Length 353 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA9-201ENST00000530422 AEBP2Q6ZN18 517 aaPredicted RBP27.54■■■□□ 2
SCARNA9-201ENST00000530422 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
SCARNA9-201ENST00000530422 SENP3Q9H4L4 574 aaPredicted RBP23.34■■□□□ 1.33
SCARNA9-201ENST00000530422 PHF23Q9BUL5 403 aaPredicted RBP23.12■■□□□ 1.29
SCARNA9-201ENST00000530422 FOXD1Q16676 465 aa21.83■■□□□ 1.09
SCARNA9-201ENST00000530422 PLPPR3Q6T4P5 718 aa20.93■□□□□ 0.94
SCARNA9-201ENST00000530422 PPP6R1Q9UPN7 881 aa20.55■□□□□ 0.88
SCARNA9-201ENST00000530422 ADRA2BP18089 450 aa20.47■□□□□ 0.87
SCARNA9-201ENST00000530422 PIAS4Q8N2W9 510 aaPredicted RBP20.4■□□□□ 0.86
SCARNA9-201ENST00000530422 MSH5O43196 834 aa20.28■□□□□ 0.84
SCARNA9-201ENST00000530422 POTEDQ86YR6 584 aa19.7■□□□□ 0.74
SCARNA9-201ENST00000530422 MAPK8IP2Q13387 824 aaPredicted RBP18.8■□□□□ 0.6
SCARNA9-201ENST00000530422 SCAF1Q9H7N4 1312 aaKnown RBP18.56■□□□□ 0.56
SCARNA9-201ENST00000530422 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
SCARNA9-201ENST00000530422 PPP4R3CPQ6ZMV5 832 aa18.4■□□□□ 0.54
SCARNA9-201ENST00000530422 CNKSR2Q8WXI2 1034 aa17.99■□□□□ 0.47
SCARNA9-201ENST00000530422 HOXD11P31277 338 aaPredicted RBP17.91■□□□□ 0.46
SCARNA9-201ENST00000530422 DCAF8L1A6NGE4 600 aa17.82■□□□□ 0.44
SCARNA9-201ENST00000530422 RNF216Q9NWF9 866 aaPredicted RBP17.79■□□□□ 0.44
SCARNA9-201ENST00000530422 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
SCARNA9-201ENST00000530422 NPM3O75607 178 aaKnown RBP17.5■□□□□ 0.39
SCARNA9-201ENST00000530422 CACNB1Q02641 598 aaPredicted RBP17.38■□□□□ 0.37
SCARNA9-201ENST00000530422 RNF39Q9H2S5 420 aa17.38■□□□□ 0.37
SCARNA9-201ENST00000530422 SLC24A1O60721 1099 aa17.3■□□□□ 0.36
SCARNA9-201ENST00000530422 KCNA4P22459 653 aa17.3■□□□□ 0.36
SCARNA9-201ENST00000530422 EHMT2Q96KQ7 1210 aa17.27■□□□□ 0.36
SCARNA9-201ENST00000530422 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
SCARNA9-201ENST00000530422 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
SCARNA9-201ENST00000530422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.07■□□□□ 0.32
SCARNA9-201ENST00000530422 U3KPZ7 1027 aaPredicted RBP16.77■□□□□ 0.28
SCARNA9-201ENST00000530422 SLC4A2P04920 1241 aa16.71■□□□□ 0.27
SCARNA9-201ENST00000530422 SPINK5Q9NQ38 1064 aaPredicted RBP16.53■□□□□ 0.24
SCARNA9-201ENST00000530422 CAPN15O75808 1086 aa16.43■□□□□ 0.22
SCARNA9-201ENST00000530422 CSRNP3Q8WYN3 585 aa16.39■□□□□ 0.21
SCARNA9-201ENST00000530422 DSG3P32926 999 aa16.33■□□□□ 0.2
SCARNA9-201ENST00000530422 SLC4A1APQ9BWU0 796 aaKnown RBP16.29■□□□□ 0.2
SCARNA9-201ENST00000530422 TRHP20396 242 aaPredicted RBP16.22■□□□□ 0.19
SCARNA9-201ENST00000530422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.2■□□□□ 0.18
SCARNA9-201ENST00000530422 HNRNPUL2Q1KMD3 747 aaKnown RBP16.2■□□□□ 0.18
SCARNA9-201ENST00000530422 RTN4Q9NQC3 1192 aaKnown RBP16.17■□□□□ 0.18
SCARNA9-201ENST00000530422 AMER1Q5JTC6 1135 aaPredicted RBP16.16■□□□□ 0.18
SCARNA9-201ENST00000530422 SAMD1Q6SPF0 538 aaPredicted RBP16.15■□□□□ 0.18
SCARNA9-201ENST00000530422 APLP2Q06481 763 aa16.14■□□□□ 0.17
SCARNA9-201ENST00000530422 ABCB7O75027 752 aa16.12■□□□□ 0.17
SCARNA9-201ENST00000530422 MYCNP04198 464 aaPredicted RBP16.11■□□□□ 0.17
SCARNA9-201ENST00000530422 ZNF219Q9P2Y4 722 aaPredicted RBP16.11■□□□□ 0.17
SCARNA9-201ENST00000530422 FOXD4L1Q9NU39 408 aa16.04■□□□□ 0.16
SCARNA9-201ENST00000530422 ZBTB22O15209 634 aa15.95■□□□□ 0.14
SCARNA9-201ENST00000530422 ATF5Q9Y2D1 282 aaPredicted RBP15.86■□□□□ 0.13
SCARNA9-201ENST00000530422 POLA2Q14181 598 aa15.8■□□□□ 0.12
SCARNA9-201ENST00000530422 RBM42Q9BTD8 480 aaKnown RBP15.47■□□□□ 0.07
SCARNA9-201ENST00000530422 ATXN8OSP0DMR3 200 aa15.46■□□□□ 0.07
SCARNA9-201ENST00000530422 POTEHQ6S545 545 aa15.44■□□□□ 0.06
SCARNA9-201ENST00000530422 ZBTB12Q9Y330 459 aaPredicted RBP15.37■□□□□ 0.05
SCARNA9-201ENST00000530422 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
SCARNA9-201ENST00000530422 AKT1S1Q96B36 256 aa15.18■□□□□ 0.02
SCARNA9-201ENST00000530422 CHRDL2Q6WN34 429 aa15.17■□□□□ 0.02
SCARNA9-201ENST00000530422 MKRN4PQ13434 485 aaPredicted RBP15.11■□□□□ 0.01
SCARNA9-201ENST00000530422 DAXXQ9UER7 740 aaPredicted RBP15.09■□□□□ 0.01
SCARNA9-201ENST00000530422 FBLN2P98095 1184 aa15.08■□□□□ 0
SCARNA9-201ENST00000530422 REM2Q8IYK8 340 aaPredicted RBP15.08■□□□□ 0
SCARNA9-201ENST00000530422 SPDYE2BA6NHP3 402 aa14.96□□□□□ -0.01
SCARNA9-201ENST00000530422 SPDYE6P0CI01 402 aa14.96□□□□□ -0.01
SCARNA9-201ENST00000530422 PRKCSHP14314 528 aaPredicted RBP14.96□□□□□ -0.01
SCARNA9-201ENST00000530422 SPDYE2Q495Y8 402 aa14.96□□□□□ -0.01
SCARNA9-201ENST00000530422 PITPNM1O00562 1244 aa14.94□□□□□ -0.02
SCARNA9-201ENST00000530422 BCANQ96GW7 911 aa14.87□□□□□ -0.03
SCARNA9-201ENST00000530422 PIP4P2Q8N4L2 257 aa14.86□□□□□ -0.03
SCARNA9-201ENST00000530422 ZNF692Q9BU19 519 aaPredicted RBP14.83□□□□□ -0.04
SCARNA9-201ENST00000530422 TAOK2Q9UL54 1235 aa14.83□□□□□ -0.04
SCARNA9-201ENST00000530422 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
SCARNA9-201ENST00000530422 PLCB2Q00722 1185 aa14.8□□□□□ -0.04
SCARNA9-201ENST00000530422 FXR2P51116 673 aaKnown RBP eCLIP14.76□□□□□ -0.05
SCARNA9-201ENST00000530422 TTBK1Q5TCY1 1321 aaPredicted RBP14.71□□□□□ -0.05
SCARNA9-201ENST00000530422 FKBP8Q14318 412 aa14.7□□□□□ -0.06
SCARNA9-201ENST00000530422 CLEC11AQ9Y240 323 aa14.7□□□□□ -0.06
SCARNA9-201ENST00000530422 ARXQ96QS3 562 aa14.69□□□□□ -0.06
SCARNA9-201ENST00000530422 SPDYE1Q8NFV5 336 aaPredicted RBP14.66□□□□□ -0.06
SCARNA9-201ENST00000530422 MYT1Q01538 1121 aa14.65□□□□□ -0.06
SCARNA9-201ENST00000530422 PABPN1Q86U42 306 aaKnown RBP eCLIP14.64□□□□□ -0.07
SCARNA9-201ENST00000530422 HAP1P54257 671 aaPredicted RBP14.56□□□□□ -0.08
SCARNA9-201ENST00000530422 PRKAR2AP13861 404 aaKnown RBP14.54□□□□□ -0.08
SCARNA9-201ENST00000530422 HAX1O00165 279 aa14.53□□□□□ -0.08
SCARNA9-201ENST00000530422 TPRNQ4KMQ1 711 aa14.53□□□□□ -0.08
SCARNA9-201ENST00000530422 SP7Q8TDD2 431 aaPredicted RBP14.52□□□□□ -0.09
SCARNA9-201ENST00000530422 TIMELESSQ9UNS1 1208 aa14.51□□□□□ -0.09
SCARNA9-201ENST00000530422 EVX2Q03828 476 aa14.46□□□□□ -0.09
SCARNA9-201ENST00000530422 CHADLQ6NUI6 762 aa14.46□□□□□ -0.09
SCARNA9-201ENST00000530422 PRR29P0C7W0 189 aa14.44□□□□□ -0.1
SCARNA9-201ENST00000530422 VSIG10Q8N0Z9 540 aa14.43□□□□□ -0.1
SCARNA9-201ENST00000530422 PELP1Q8IZL8 1130 aaKnown RBP14.41□□□□□ -0.1
SCARNA9-201ENST00000530422 SPDYE4A6NLX3 237 aa14.4□□□□□ -0.1
SCARNA9-201ENST00000530422 TULP1O00294 542 aaPredicted RBP14.36□□□□□ -0.11
SCARNA9-201ENST00000530422 C19orf67A6NJJ6 358 aa14.28□□□□□ -0.12
SCARNA9-201ENST00000530422 ERICH6Q7L0X2 663 aa14.27□□□□□ -0.13
SCARNA9-201ENST00000530422 HOMEZQ8IX15 550 aa14.25□□□□□ -0.13
SCARNA9-201ENST00000530422 FARP1Q9Y4F1 1045 aaPredicted RBP14.19□□□□□ -0.14
SCARNA9-201ENST00000530422 GTF3C3Q9Y5Q9 886 aa14.17□□□□□ -0.14
SCARNA9-201ENST00000530422 STAG3Q9UJ98 1225 aa14.16□□□□□ -0.14
SCARNA9-201ENST00000530422 CREBZFQ9NS37 354 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms